RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 GAGE2BQ13066 116 aa4.07□□□□□ -1.76
TNFSF4-201ENST00000281834 C14orf132Q9NPU4 83 aa4.07□□□□□ -1.76
TNFSF4-201ENST00000281834 K7EIL1 84 aa4.07□□□□□ -1.76
TNFSF4-201ENST00000281834 RPL28P46779 137 aaKnown RBP4.07□□□□□ -1.76
TNFSF4-201ENST00000281834 C9orf129Q5T035 196 aaKnown RBP4.07□□□□□ -1.76
TNFSF4-201ENST00000281834 CXCL5P42830 114 aa4.06□□□□□ -1.76
TNFSF4-201ENST00000281834 C6orf48Q9UBA6 75 aa4.06□□□□□ -1.76
TNFSF4-201ENST00000281834 Q6ZRU5 148 aa4.05□□□□□ -1.76
TNFSF4-201ENST00000281834 MDFIQ99750 246 aa4.05□□□□□ -1.76
TNFSF4-201ENST00000281834 PRR34Q9NV39 138 aa4.05□□□□□ -1.76
TNFSF4-201ENST00000281834 TRACP01848 142 aa4.05□□□□□ -1.76
TNFSF4-201ENST00000281834 KRTAP21-3Q3LHN1 58 aa4.05□□□□□ -1.76
TNFSF4-201ENST00000281834 TMEM126AQ9H061 195 aa4.05□□□□□ -1.76
TNFSF4-201ENST00000281834 KLK5Q9Y337 293 aaPredicted RBP4.04□□□□□ -1.76
TNFSF4-201ENST00000281834 COL7A1Q02388 2944 aa4.04□□□□□ -1.76
TNFSF4-201ENST00000281834 CASC10Q5T4H9 136 aa4.04□□□□□ -1.76
TNFSF4-201ENST00000281834 TRBV10-3A0A0K0K1G6 114 aa4.04□□□□□ -1.76
TNFSF4-201ENST00000281834 H0YGX0 51 aa4.04□□□□□ -1.76
TNFSF4-201ENST00000281834 LINC00588Q9Y4M8 146 aa4.03□□□□□ -1.76
TNFSF4-201ENST00000281834 TRAV10A0A0B4J240 114 aa4.03□□□□□ -1.76
TNFSF4-201ENST00000281834 COX17Q14061 63 aa4.03□□□□□ -1.76
TNFSF4-201ENST00000281834 CCDC179H3BU77 68 aa4.02□□□□□ -1.77
TNFSF4-201ENST00000281834 ORMDL1Q9P0S3 153 aa4.02□□□□□ -1.77
TNFSF4-201ENST00000281834 C15orf56Q8N910 161 aa4.02□□□□□ -1.77
TNFSF4-201ENST00000281834 LAMTOR3Q9UHA4 124 aa4.02□□□□□ -1.77
TNFSF4-201ENST00000281834 CMYA5Q8N3K9 4069 aa4.02□□□□□ -1.77
TNFSF4-201ENST00000281834 UBE2DNLQ8IWF7 75 aa4.02□□□□□ -1.77
TNFSF4-201ENST00000281834 LYSTQ99698 3801 aa4.02□□□□□ -1.77
TNFSF4-201ENST00000281834 SYCNQ0VAF6 134 aa4.01□□□□□ -1.77
TNFSF4-201ENST00000281834 LINC01556Q5JQF7 62 aa4.01□□□□□ -1.77
TNFSF4-201ENST00000281834 Q6ZQY7 126 aa4.01□□□□□ -1.77
TNFSF4-201ENST00000281834 LINC01561Q8N1V8 128 aa4.01□□□□□ -1.77
TNFSF4-201ENST00000281834 C22orf24Q9Y442 160 aa4.01□□□□□ -1.77
TNFSF4-201ENST00000281834 RPL37AP8A6NKH3 93 aa4.01□□□□□ -1.77
TNFSF4-201ENST00000281834 Q6ZRP5 223 aa4.01□□□□□ -1.77
TNFSF4-201ENST00000281834 Q8N814 137 aa4.01□□□□□ -1.77
TNFSF4-201ENST00000281834 SVIPQ8NHG7 77 aa4.01□□□□□ -1.77
TNFSF4-201ENST00000281834 IGLV2-33A0A075B6J2 118 aaPredicted RBP4□□□□□ -1.77
TNFSF4-201ENST00000281834 IGKV3D-7A0A0C4DH55 119 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 USP17L23D6RBM5 183 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 H3BNG1 76 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 M0QXV9 152 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 INAFM2P0DMQ5 153 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 HUWE1Q7Z6Z7 4374 aaKnown RBP4□□□□□ -1.77
TNFSF4-201ENST00000281834 TRAV23DV6A0A075B6W5 121 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 IGKV2-24A0A0C4DH68 120 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 PSCAO43653 123 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 DEFB105AQ8NG35 78 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 hADV29S1A0JD25 119 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 NDUFC2O95298 119 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 NKAPP1Q8N9T2 125 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 SMCR5Q8TEV8 140 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 TM2D3Q9BRN9 247 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 TGP01266 2768 aa4□□□□□ -1.77
TNFSF4-201ENST00000281834 FAM168BA1KXE4 195 aa3.99□□□□□ -1.77
TNFSF4-201ENST00000281834 NDUFC2-KCTD14E9PQ53 114 aa3.99□□□□□ -1.77
TNFSF4-201ENST00000281834 KRTAP26-1Q6PEX3 210 aa3.99□□□□□ -1.77
TNFSF4-201ENST00000281834 DIRC1Q969H9 104 aa3.99□□□□□ -1.77
TNFSF4-201ENST00000281834 ZNF73O43830 326 aaPredicted RBP3.98□□□□□ -1.77
TNFSF4-201ENST00000281834 SDIM1Q6ZPB5 146 aa3.98□□□□□ -1.77
TNFSF4-201ENST00000281834 FAM19A5Q7Z5A7 132 aaPredicted RBP3.98□□□□□ -1.77
TNFSF4-201ENST00000281834 C9orf153Q5TBE3 101 aa3.98□□□□□ -1.77
TNFSF4-201ENST00000281834 LINC00575Q6W349 94 aa3.98□□□□□ -1.77
TNFSF4-201ENST00000281834 LOC107984640A0A0U1RRK4 108 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 M0R2N4 97 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 DNAH10OSP0CZ25 163 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 SERTAD4-AS1Q5TG53 156 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 LINC00846Q9NV44 126 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 DNAH10Q8IVF4 4471 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 FAM236AA0A1B0GUQ0 79 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 FAM236BA0A1B0GV22 79 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 SCGB1A1P11684 91 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 VPREB1P12018 145 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 HIST1H4AP62805 103 aaKnown RBP3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 PPDPFQ9H3Y8 114 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 TMEM256-PLSCR3K7ERE1 68 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 IGLV6-57P01721 117 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 COX7BP24311 80 aa3.97□□□□□ -1.77
TNFSF4-201ENST00000281834 KRTAP1-5Q9BYS1 174 aa3.96□□□□□ -1.78
TNFSF4-201ENST00000281834 A0A087WVE0 104 aa3.96□□□□□ -1.78
TNFSF4-201ENST00000281834 GVQW2A0A096LPI5 108 aaPredicted RBP3.96□□□□□ -1.78
TNFSF4-201ENST00000281834 NDUFV3P56181 108 aaKnown RBP3.96□□□□□ -1.78
TNFSF4-201ENST00000281834 DPH3Q96FX2 82 aa3.96□□□□□ -1.78
TNFSF4-201ENST00000281834 M0R378 163 aa3.96□□□□□ -1.78
TNFSF4-201ENST00000281834 FUSP35637 526 aaKnown RBP eCLIP3.96□□□□□ -1.78
TNFSF4-201ENST00000281834 FAM240AA0A1B0GVK7 77 aa3.95□□□□□ -1.78
TNFSF4-201ENST00000281834 RBM3P98179 157 aaKnown RBP3.95□□□□□ -1.78
TNFSF4-201ENST00000281834 C2orf48Q96LS8 159 aa3.95□□□□□ -1.78
TNFSF4-201ENST00000281834 SRRM2Q9UQ35 2752 aaKnown RBP3.95□□□□□ -1.78
TNFSF4-201ENST00000281834 DNHD1Q96M86 4753 aa3.95□□□□□ -1.78
TNFSF4-201ENST00000281834 ACYP1P07311 99 aa3.95□□□□□ -1.78
TNFSF4-201ENST00000281834 C3orf22Q8N5N4 141 aa3.95□□□□□ -1.78
TNFSF4-201ENST00000281834 C7orf33Q8WU49 177 aa3.95□□□□□ -1.78
TNFSF4-201ENST00000281834 LINC00643Q86TS7 51 aa3.94□□□□□ -1.78
TNFSF4-201ENST00000281834 LINC01600Q96MT4 127 aa3.94□□□□□ -1.78
TNFSF4-201ENST00000281834 HAMPP81172 84 aa3.94□□□□□ -1.78
TNFSF4-201ENST00000281834 SCXQ7RTU7 201 aa3.94□□□□□ -1.78
TNFSF4-201ENST00000281834 RMI2Q96E14 147 aa3.94□□□□□ -1.78
TNFSF4-201ENST00000281834 DSCR8Q96T75 97 aa3.94□□□□□ -1.78
TNFSF4-201ENST00000281834 JMJD7-PLA2G4BH0Y9G9 81 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms