RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 Q8NBF4 154 aa13.97□□□□□ -0.17
CACNA1B-201ENST00000277549 YPEL4Q96NS1 127 aa13.97□□□□□ -0.17
CACNA1B-201ENST00000277549 DNAH10OSP0CZ25 163 aa13.96□□□□□ -0.18
CACNA1B-201ENST00000277549 TTC28Q96AY4 2481 aa13.95□□□□□ -0.18
CACNA1B-201ENST00000277549 PTPRSQ13332 1948 aa13.94□□□□□ -0.18
CACNA1B-201ENST00000277549 CACNA1AO00555 2505 aa13.94□□□□□ -0.18
CACNA1B-201ENST00000277549 IGLV6-57P01721 117 aa13.92□□□□□ -0.18
CACNA1B-201ENST00000277549 NAV3Q8IVL0 2385 aa13.92□□□□□ -0.18
CACNA1B-201ENST00000277549 C11orf72Q8NBR9 251 aa13.92□□□□□ -0.18
CACNA1B-201ENST00000277549 DSCR10P59022 87 aa13.91□□□□□ -0.18
CACNA1B-201ENST00000277549 ANKHD1Q8IWZ3 2542 aaKnown RBP13.91□□□□□ -0.18
CACNA1B-201ENST00000277549 MYO18BQ8IUG5 2567 aa13.89□□□□□ -0.19
CACNA1B-201ENST00000277549 LRP4O75096 1905 aa13.87□□□□□ -0.19
CACNA1B-201ENST00000277549 OBSCN-AS1Q96MR7 158 aa13.86□□□□□ -0.19
CACNA1B-201ENST00000277549 CPAMD8Q8IZJ3 1885 aa13.86□□□□□ -0.19
CACNA1B-201ENST00000277549 LINC00310P59036 64 aa13.85□□□□□ -0.19
CACNA1B-201ENST00000277549 FAM19A4Q96LR4 140 aa13.85□□□□□ -0.19
CACNA1B-201ENST00000277549 CXCL6P80162 114 aa13.84□□□□□ -0.19
CACNA1B-201ENST00000277549 TP53AIP1Q9HCN2 124 aa13.84□□□□□ -0.19
CACNA1B-201ENST00000277549 LINC01561Q8N1V8 128 aa13.83□□□□□ -0.2
CACNA1B-201ENST00000277549 ANAPC11Q9NYG5 84 aa13.82□□□□□ -0.2
CACNA1B-201ENST00000277549 BCE1O60756 84 aa13.82□□□□□ -0.2
CACNA1B-201ENST00000277549 FAM218AQ96MZ4 157 aa13.81□□□□□ -0.2
CACNA1B-201ENST00000277549 Q6ZRX8 168 aa13.81□□□□□ -0.2
CACNA1B-201ENST00000277549 ELOF1P60002 83 aaKnown RBP13.8□□□□□ -0.2
CACNA1B-201ENST00000277549 A0A096LNJ9 63 aa13.79□□□□□ -0.2
CACNA1B-201ENST00000277549 TRAV22A0A0B4J277 110 aa13.78□□□□□ -0.2
CACNA1B-201ENST00000277549 A0A0D9SG42 100 aa13.78□□□□□ -0.2
CACNA1B-201ENST00000277549 IGLV5-37A0A075B6J1 123 aa13.76□□□□□ -0.21
CACNA1B-201ENST00000277549 LINC00304Q8N9R0 145 aa13.76□□□□□ -0.21
CACNA1B-201ENST00000277549 K7EQZ3 153 aa13.76□□□□□ -0.21
CACNA1B-201ENST00000277549 A0A0G2JQZ4 141 aa13.75□□□□□ -0.21
CACNA1B-201ENST00000277549 A0A1W2PNN7 141 aa13.75□□□□□ -0.21
CACNA1B-201ENST00000277549 MUC22E2RYF6 1773 aaPredicted RBP13.75□□□□□ -0.21
CACNA1B-201ENST00000277549 IGHV3OR16-9A0A0B4J2B5 98 aa13.75□□□□□ -0.21
CACNA1B-201ENST00000277549 KRTAP10-11P60412 298 aa13.74□□□□□ -0.21
CACNA1B-201ENST00000277549 LINC01600Q96MT4 127 aa13.73□□□□□ -0.21
CACNA1B-201ENST00000277549 Q8NAQ8 132 aa13.72□□□□□ -0.21
CACNA1B-201ENST00000277549 C4orf26Q17RF5 130 aa13.71□□□□□ -0.21
CACNA1B-201ENST00000277549 M0R2T5 61 aa13.71□□□□□ -0.21
CACNA1B-201ENST00000277549 TM2D3Q9BRN9 247 aa13.7□□□□□ -0.22
CACNA1B-201ENST00000277549 C9orf129Q5T035 196 aaKnown RBP13.68□□□□□ -0.22
CACNA1B-201ENST00000277549 IGLV5-39A0A0G2JS06 123 aa13.67□□□□□ -0.22
CACNA1B-201ENST00000277549 C8orf87E5RJ46 101 aa13.66□□□□□ -0.22
CACNA1B-201ENST00000277549 Q6ZQT0 140 aa13.65□□□□□ -0.22
CACNA1B-201ENST00000277549 ZNF575Q86XF7 245 aa13.65□□□□□ -0.23
CACNA1B-201ENST00000277549 K7EIL1 84 aa13.64□□□□□ -0.23
CACNA1B-201ENST00000277549 CRIPTQ9P021 101 aa13.64□□□□□ -0.23
CACNA1B-201ENST00000277549 COL27A1Q8IZC6 1860 aaPredicted RBP13.62□□□□□ -0.23
CACNA1B-201ENST00000277549 MRPL34Q9BQ48 92 aaKnown RBP13.62□□□□□ -0.23
CACNA1B-201ENST00000277549 TRBV7-4A0A0J9YYF1 115 aa13.61□□□□□ -0.23
CACNA1B-201ENST00000277549 NAV2Q8IVL1 2488 aa13.61□□□□□ -0.23
CACNA1B-201ENST00000277549 H3BNG1 76 aa13.6□□□□□ -0.23
CACNA1B-201ENST00000277549 RBM12B-AS1Q9P1G2 102 aa13.6□□□□□ -0.23
CACNA1B-201ENST00000277549 GVQW2A0A096LPI5 108 aaPredicted RBP13.59□□□□□ -0.23
CACNA1B-201ENST00000277549 C15orf56Q8N910 161 aa13.59□□□□□ -0.23
CACNA1B-201ENST00000277549 LRRK2Q5S007 2527 aa13.57□□□□□ -0.24
CACNA1B-201ENST00000277549 ZFYVE26Q68DK2 2539 aa13.57□□□□□ -0.24
CACNA1B-201ENST00000277549 A8MWP4 228 aa13.56□□□□□ -0.24
CACNA1B-201ENST00000277549 PTPRBP23467 1997 aa13.56□□□□□ -0.24
CACNA1B-201ENST00000277549 COX8CQ7Z4L0 72 aa13.55□□□□□ -0.24
CACNA1B-201ENST00000277549 COA5Q86WW8 74 aa13.55□□□□□ -0.24
CACNA1B-201ENST00000277549 PIEZO2Q9H5I5 2752 aa13.54□□□□□ -0.24
CACNA1B-201ENST00000277549 Q8N1X5 172 aa13.53□□□□□ -0.24
CACNA1B-201ENST00000277549 LOC101927531A0A1B0GV80 90 aa13.51□□□□□ -0.25
CACNA1B-201ENST00000277549 CSNK1G2-AS1Q8NCQ2 148 aa13.51□□□□□ -0.25
CACNA1B-201ENST00000277549 IGLV1-50A0A075B6I6 118 aa13.49□□□□□ -0.25
CACNA1B-201ENST00000277549 LINC00528Q8N1L1 170 aa13.48□□□□□ -0.25
CACNA1B-201ENST00000277549 IGFL1Q6UW32 110 aa13.48□□□□□ -0.25
CACNA1B-201ENST00000277549 A0A087WTM6 91 aa13.47□□□□□ -0.25
CACNA1B-201ENST00000277549 COL4A2P08572 1712 aa13.47□□□□□ -0.25
CACNA1B-201ENST00000277549 IGLV5-48A0A075B6I7 105 aa13.46□□□□□ -0.25
CACNA1B-201ENST00000277549 NCOR2Q9Y618 2525 aa13.46□□□□□ -0.26
CACNA1B-201ENST00000277549 VPREB1P12018 145 aa13.45□□□□□ -0.26
CACNA1B-201ENST00000277549 IGF2RP11717 2491 aa13.45□□□□□ -0.26
CACNA1B-201ENST00000277549 KRTAP10-3P60369 221 aa13.44□□□□□ -0.26
CACNA1B-201ENST00000277549 A8MUN3 132 aa13.44□□□□□ -0.26
CACNA1B-201ENST00000277549 JMJD1CQ15652 2540 aa13.43□□□□□ -0.26
CACNA1B-201ENST00000277549 LOC110117498A0A087WWA1 95 aa13.43□□□□□ -0.26
CACNA1B-201ENST00000277549 ZNF861PO60384 105 aa13.43□□□□□ -0.26
CACNA1B-201ENST00000277549 C8orf17Q9NRJ1 99 aa13.43□□□□□ -0.26
CACNA1B-201ENST00000277549 MIR22HGQ0VDD5 57 aa13.42□□□□□ -0.26
CACNA1B-201ENST00000277549 IGLV5-45A0A087WSX0 123 aa13.42□□□□□ -0.26
CACNA1B-201ENST00000277549 SMCPP49901 116 aaPredicted RBP13.42□□□□□ -0.26
CACNA1B-201ENST00000277549 C2CD3Q4AC94 2353 aa13.41□□□□□ -0.26
CACNA1B-201ENST00000277549 H3BPC8 53 aa13.39□□□□□ -0.27
CACNA1B-201ENST00000277549 PRO0628Q9UI54 55 aa13.38□□□□□ -0.27
CACNA1B-201ENST00000277549 CASC10Q5T4H9 136 aa13.38□□□□□ -0.27
CACNA1B-201ENST00000277549 UQCR11O14957 56 aa13.37□□□□□ -0.27
CACNA1B-201ENST00000277549 PIEZO1Q92508 2521 aa13.37□□□□□ -0.27
CACNA1B-201ENST00000277549 Q6ZSA8 131 aa13.36□□□□□ -0.27
CACNA1B-201ENST00000277549 IGLV7-43P04211 117 aa13.35□□□□□ -0.27
CACNA1B-201ENST00000277549 A0A1B0GVX0 72 aa13.35□□□□□ -0.27
CACNA1B-201ENST00000277549 FN1P02751 2386 aaKnown RBP13.34□□□□□ -0.27
CACNA1B-201ENST00000277549 PSORS1C2Q9UIG4 136 aa13.34□□□□□ -0.27
CACNA1B-201ENST00000277549 LINC01546A6NGU7 62 aa13.33□□□□□ -0.27
CACNA1B-201ENST00000277549 PRR15Q8IV56 129 aa13.29□□□□□ -0.28
CACNA1B-201ENST00000277549 MYO9AB2RTY4 2548 aa13.29□□□□□ -0.28
CACNA1B-201ENST00000277549 TLN1Q9Y490 2541 aaKnown RBP13.27□□□□□ -0.28
CACNA1B-201ENST00000277549 CAMK2N1Q7Z7J9 78 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms