RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 A0A087WYN8 130 aa10.02□□□□□ -0.81
TMEM47-201ENST00000275954 SOSTDC1Q6X4U4 206 aa10.02□□□□□ -0.81
TMEM47-201ENST00000275954 EIF4EBP3O60516 100 aaPredicted RBP10.02□□□□□ -0.81
TMEM47-201ENST00000275954 LY6G6CO95867 125 aa10.02□□□□□ -0.81
TMEM47-201ENST00000275954 IGLV5-39A0A0G2JS06 123 aa10.02□□□□□ -0.81
TMEM47-201ENST00000275954 SMIM20Q8N5G0 67 aa10.02□□□□□ -0.81
TMEM47-201ENST00000275954 PRO0461Q9UI25 63 aa10.01□□□□□ -0.81
TMEM47-201ENST00000275954 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.01□□□□□ -0.81
TMEM47-201ENST00000275954 SYCNQ0VAF6 134 aa10.01□□□□□ -0.81
TMEM47-201ENST00000275954 WFDC10BQ8IUB3 73 aa9.99□□□□□ -0.81
TMEM47-201ENST00000275954 NREPQ16612 68 aa9.98□□□□□ -0.81
TMEM47-201ENST00000275954 SBSPONQ8IVN8 264 aa9.98□□□□□ -0.81
TMEM47-201ENST00000275954 CITED1Q99966 193 aa9.98□□□□□ -0.81
TMEM47-201ENST00000275954 HIGD2AQ9BW72 106 aa9.98□□□□□ -0.81
TMEM47-201ENST00000275954 RPL28P46779 137 aaKnown RBP9.97□□□□□ -0.81
TMEM47-201ENST00000275954 X6R8D5 127 aa9.97□□□□□ -0.81
TMEM47-201ENST00000275954 A0A096LNI7 61 aa9.97□□□□□ -0.81
TMEM47-201ENST00000275954 FUSP35637 526 aaKnown RBP eCLIP9.97□□□□□ -0.81
TMEM47-201ENST00000275954 FAM19A5Q7Z5A7 132 aaPredicted RBP9.97□□□□□ -0.81
TMEM47-201ENST00000275954 A0A1B0GUV1 79 aa9.96□□□□□ -0.81
TMEM47-201ENST00000275954 CDIP1Q9H305 208 aa9.96□□□□□ -0.81
TMEM47-201ENST00000275954 RPL37AP8A6NKH3 93 aa9.96□□□□□ -0.82
TMEM47-201ENST00000275954 ATOX1O00244 68 aa9.96□□□□□ -0.82
TMEM47-201ENST00000275954 ENHOQ6UWT2 76 aa9.96□□□□□ -0.82
TMEM47-201ENST00000275954 WFDC9Q8NEX5 89 aa9.96□□□□□ -0.82
TMEM47-201ENST00000275954 TRBV10-3A0A0K0K1G6 114 aa9.94□□□□□ -0.82
TMEM47-201ENST00000275954 VWFP04275 2813 aa9.94□□□□□ -0.82
TMEM47-201ENST00000275954 IGLV5-45A0A087WSX0 123 aa9.94□□□□□ -0.82
TMEM47-201ENST00000275954 GIG44P09565 113 aaPredicted RBP9.94□□□□□ -0.82
TMEM47-201ENST00000275954 LYPD5Q6UWN5 251 aa9.93□□□□□ -0.82
TMEM47-201ENST00000275954 LITAFQ99732 161 aa9.93□□□□□ -0.82
TMEM47-201ENST00000275954 CCDC179H3BU77 68 aa9.92□□□□□ -0.82
TMEM47-201ENST00000275954 TRAV10A0A0B4J240 114 aa9.92□□□□□ -0.82
TMEM47-201ENST00000275954 FAM218AQ96MZ4 157 aa9.92□□□□□ -0.82
TMEM47-201ENST00000275954 BSNQ9UPA5 3926 aa9.91□□□□□ -0.82
TMEM47-201ENST00000275954 ZNF73O43830 326 aaPredicted RBP9.91□□□□□ -0.82
TMEM47-201ENST00000275954 UPK3BQ9BT76 320 aa9.91□□□□□ -0.82
TMEM47-201ENST00000275954 KLK5Q9Y337 293 aaPredicted RBP9.91□□□□□ -0.82
TMEM47-201ENST00000275954 C3orf84H3BNL1 204 aa9.91□□□□□ -0.82
TMEM47-201ENST00000275954 A0A087WVE0 104 aa9.91□□□□□ -0.82
TMEM47-201ENST00000275954 COX17Q14061 63 aa9.91□□□□□ -0.82
TMEM47-201ENST00000275954 C10orf25Q5T742 122 aa9.9□□□□□ -0.82
TMEM47-201ENST00000275954 CCKP06307 115 aa9.9□□□□□ -0.83
TMEM47-201ENST00000275954 KRTAP10-11P60412 298 aa9.89□□□□□ -0.83
TMEM47-201ENST00000275954 Q8N814 137 aa9.89□□□□□ -0.83
TMEM47-201ENST00000275954 C20orf197Q8N268 126 aa9.89□□□□□ -0.83
TMEM47-201ENST00000275954 CSNK1G2-AS1Q8NCQ2 148 aa9.88□□□□□ -0.83
TMEM47-201ENST00000275954 TGP01266 2768 aa9.88□□□□□ -0.83
TMEM47-201ENST00000275954 C19orf73Q9NVV2 129 aa9.88□□□□□ -0.83
TMEM47-201ENST00000275954 UBE2AP49459 152 aa9.87□□□□□ -0.83
TMEM47-201ENST00000275954 M0R378 163 aa9.87□□□□□ -0.83
TMEM47-201ENST00000275954 CDK2AP2O75956 126 aa9.87□□□□□ -0.83
TMEM47-201ENST00000275954 FAM19A1Q7Z5A9 133 aa9.86□□□□□ -0.83
TMEM47-201ENST00000275954 Q6ZRU5 148 aa9.85□□□□□ -0.83
TMEM47-201ENST00000275954 PLAC8L1A1L4L8 177 aa9.85□□□□□ -0.83
TMEM47-201ENST00000275954 USP17L23D6RBM5 183 aa9.85□□□□□ -0.83
TMEM47-201ENST00000275954 BPY2O14599 106 aa9.84□□□□□ -0.83
TMEM47-201ENST00000275954 PDE6GP18545 87 aa9.84□□□□□ -0.83
TMEM47-201ENST00000275954 FAM240AA0A1B0GVK7 77 aa9.84□□□□□ -0.83
TMEM47-201ENST00000275954 PPDPFQ9H3Y8 114 aa9.84□□□□□ -0.83
TMEM47-201ENST00000275954 EGFEM1PQ0D2K5 195 aa9.83□□□□□ -0.84
TMEM47-201ENST00000275954 ESRGQ1W209 222 aa9.83□□□□□ -0.84
TMEM47-201ENST00000275954 LINC00846Q9NV44 126 aa9.83□□□□□ -0.84
TMEM47-201ENST00000275954 Q8NAQ8 132 aa9.82□□□□□ -0.84
TMEM47-201ENST00000275954 UQCRQO14949 82 aa9.82□□□□□ -0.84
TMEM47-201ENST00000275954 K7EIL1 84 aa9.81□□□□□ -0.84
TMEM47-201ENST00000275954 H3BQ85 93 aa9.8□□□□□ -0.84
TMEM47-201ENST00000275954 NDUFC2-KCTD14E9PQ53 114 aa9.79□□□□□ -0.84
TMEM47-201ENST00000275954 IMUPQ9GZP8 106 aa9.79□□□□□ -0.84
TMEM47-201ENST00000275954 NDUFC2O95298 119 aa9.78□□□□□ -0.84
TMEM47-201ENST00000275954 C3orf22Q8N5N4 141 aa9.78□□□□□ -0.84
TMEM47-201ENST00000275954 C6orf48Q9UBA6 75 aa9.78□□□□□ -0.84
TMEM47-201ENST00000275954 LRCOL1A6NCL2 159 aa9.77□□□□□ -0.84
TMEM47-201ENST00000275954 TENM3Q9P273 2699 aa9.77□□□□□ -0.85
TMEM47-201ENST00000275954 LINC00575Q6W349 94 aa9.77□□□□□ -0.85
TMEM47-201ENST00000275954 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.76□□□□□ -0.85
TMEM47-201ENST00000275954 IL17DQ8TAD2 202 aa9.76□□□□□ -0.85
TMEM47-201ENST00000275954 NDUFS5O43920 106 aa9.76□□□□□ -0.85
TMEM47-201ENST00000275954 Q6Q795 121 aa9.75□□□□□ -0.85
TMEM47-201ENST00000275954 SNURFQ9Y675 71 aa9.75□□□□□ -0.85
TMEM47-201ENST00000275954 M0QXV9 152 aa9.74□□□□□ -0.85
TMEM47-201ENST00000275954 FAM104AQ969W3 186 aa9.74□□□□□ -0.85
TMEM47-201ENST00000275954 VPS13CQ709C8 3753 aa9.73□□□□□ -0.85
TMEM47-201ENST00000275954 Q6JHZ5 121 aa9.73□□□□□ -0.85
TMEM47-201ENST00000275954 SERP2Q8N6R1 65 aa9.73□□□□□ -0.85
TMEM47-201ENST00000275954 MUC7Q8TAX7 377 aa9.72□□□□□ -0.85
TMEM47-201ENST00000275954 H0Y9J4 135 aa9.72□□□□□ -0.85
TMEM47-201ENST00000275954 COX7CP15954 63 aa9.72□□□□□ -0.85
TMEM47-201ENST00000275954 ATP5EP2Q5VTU8 51 aa9.72□□□□□ -0.85
TMEM47-201ENST00000275954 LOC107984640A0A0U1RRK4 108 aa9.71□□□□□ -0.85
TMEM47-201ENST00000275954 LINC01561Q8N1V8 128 aa9.71□□□□□ -0.85
TMEM47-201ENST00000275954 C14orf177Q52M58 125 aa9.71□□□□□ -0.86
TMEM47-201ENST00000275954 DHRS4-AS1Q9P1J3 65 aa9.68□□□□□ -0.86
TMEM47-201ENST00000275954 J3KT08 172 aa9.68□□□□□ -0.86
TMEM47-201ENST00000275954 B9D2Q9BPU9 175 aa9.68□□□□□ -0.86
TMEM47-201ENST00000275954 DMBT1Q9UGM3 2413 aaPredicted RBP9.67□□□□□ -0.86
TMEM47-201ENST00000275954 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
TMEM47-201ENST00000275954 Q8N9L7 120 aa9.67□□□□□ -0.86
TMEM47-201ENST00000275954 LINC01556Q5JQF7 62 aa9.66□□□□□ -0.86
TMEM47-201ENST00000275954 WFDC13Q8IUB5 93 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms