RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 CAMK2N2Q96S95 79 aa11.01□□□□□ -0.65
CCDC40-201ENST00000269318 H3BT86 120 aa11.01□□□□□ -0.65
CCDC40-201ENST00000269318 J3QR89 54 aa11.01□□□□□ -0.65
CCDC40-201ENST00000269318 PPDPFLQ8WWR9 84 aa11.01□□□□□ -0.65
CCDC40-201ENST00000269318 TRACP01848 142 aa11□□□□□ -0.65
CCDC40-201ENST00000269318 VPS25Q9BRG1 176 aa11□□□□□ -0.65
CCDC40-201ENST00000269318 Q6ZRU5 148 aa10.99□□□□□ -0.65
CCDC40-201ENST00000269318 F8WDY8 70 aa10.98□□□□□ -0.65
CCDC40-201ENST00000269318 DYNC2H1Q8NCM8 4307 aaKnown RBP10.97□□□□□ -0.65
CCDC40-201ENST00000269318 H0YGX0 51 aa10.97□□□□□ -0.65
CCDC40-201ENST00000269318 TMEM126AQ9H061 195 aa10.97□□□□□ -0.65
CCDC40-201ENST00000269318 NCR3O14931 201 aa10.96□□□□□ -0.65
CCDC40-201ENST00000269318 APLNQ9ULZ1 77 aa10.96□□□□□ -0.66
CCDC40-201ENST00000269318 A0A087WYN8 130 aa10.94□□□□□ -0.66
CCDC40-201ENST00000269318 NHLRC4P0CG21 123 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-201ENST00000269318 CASC10Q5T4H9 136 aa10.94□□□□□ -0.66
CCDC40-201ENST00000269318 XAGE1AQ9HD64 81 aa10.94□□□□□ -0.66
CCDC40-201ENST00000269318 CBY1Q9Y3M2 126 aa10.94□□□□□ -0.66
CCDC40-201ENST00000269318 NDUFC2-KCTD14E9PQ53 114 aa10.93□□□□□ -0.66
CCDC40-201ENST00000269318 SYCNQ0VAF6 134 aa10.93□□□□□ -0.66
CCDC40-201ENST00000269318 RMI2Q96E14 147 aa10.93□□□□□ -0.66
CCDC40-201ENST00000269318 TEX49A0A1B0GTD5 131 aa10.92□□□□□ -0.66
CCDC40-201ENST00000269318 USP17L23D6RBM5 183 aa10.91□□□□□ -0.66
CCDC40-201ENST00000269318 IGLV6-57P01721 117 aa10.91□□□□□ -0.66
CCDC40-201ENST00000269318 LYSTQ99698 3801 aa10.91□□□□□ -0.66
CCDC40-201ENST00000269318 RPL18AQ02543 176 aaKnown RBP10.9□□□□□ -0.66
CCDC40-201ENST00000269318 S100A7L2Q5SY68 101 aa10.9□□□□□ -0.66
CCDC40-201ENST00000269318 KRTAP1-5Q9BYS1 174 aa10.9□□□□□ -0.66
CCDC40-201ENST00000269318 C22orf24Q9Y442 160 aa10.9□□□□□ -0.66
CCDC40-201ENST00000269318 CSMD3Q7Z407 3707 aa10.89□□□□□ -0.67
CCDC40-201ENST00000269318 SLPIP03973 132 aa10.89□□□□□ -0.67
CCDC40-201ENST00000269318 BAALC-AS2P0C853 105 aa10.89□□□□□ -0.67
CCDC40-201ENST00000269318 Q6ZRP5 223 aa10.89□□□□□ -0.67
CCDC40-201ENST00000269318 VPREB1P12018 145 aa10.88□□□□□ -0.67
CCDC40-201ENST00000269318 LECT2O14960 151 aa10.88□□□□□ -0.67
CCDC40-201ENST00000269318 PRKDCP78527 4128 aaKnown RBP10.87□□□□□ -0.67
CCDC40-201ENST00000269318 C6orf99Q4VX62 202 aa10.87□□□□□ -0.67
CCDC40-201ENST00000269318 DNAL4O96015 105 aa10.86□□□□□ -0.67
CCDC40-201ENST00000269318 GAGE2EQ4V326 116 aa10.86□□□□□ -0.67
CCDC40-201ENST00000269318 GAGE2DQ9UEU5 116 aa10.86□□□□□ -0.67
CCDC40-201ENST00000269318 UBE2DNLQ8IWF7 75 aa10.86□□□□□ -0.67
CCDC40-201ENST00000269318 TRBV10-3A0A0K0K1G6 114 aa10.85□□□□□ -0.67
CCDC40-201ENST00000269318 NUPR2A6NF83 97 aa10.85□□□□□ -0.67
CCDC40-201ENST00000269318 TLX1NBP0CAT3 122 aa10.85□□□□□ -0.67
CCDC40-201ENST00000269318 CDIP1Q9H305 208 aa10.85□□□□□ -0.67
CCDC40-201ENST00000269318 A0A1B0GX51 115 aa10.85□□□□□ -0.67
CCDC40-201ENST00000269318 C9orf129Q5T035 196 aaKnown RBP10.85□□□□□ -0.67
CCDC40-201ENST00000269318 LINC00167Q96N53 147 aa10.85□□□□□ -0.67
CCDC40-201ENST00000269318 MEGF8Q7Z7M0 2845 aa10.84□□□□□ -0.67
CCDC40-201ENST00000269318 Q8N814 137 aa10.83□□□□□ -0.68
CCDC40-201ENST00000269318 PLECQ15149 4684 aaKnown RBP10.82□□□□□ -0.68
CCDC40-201ENST00000269318 DNAH7Q8WXX0 4024 aa10.82□□□□□ -0.68
CCDC40-201ENST00000269318 M0R378 163 aa10.82□□□□□ -0.68
CCDC40-201ENST00000269318 TRAV23DV6A0A075B6W5 121 aa10.81□□□□□ -0.68
CCDC40-201ENST00000269318 LINC00575Q6W349 94 aa10.8□□□□□ -0.68
CCDC40-201ENST00000269318 DNAH10Q8IVF4 4471 aa10.78□□□□□ -0.68
CCDC40-201ENST00000269318 ORMDL1Q9P0S3 153 aa10.78□□□□□ -0.68
CCDC40-201ENST00000269318 SERTAD4-AS1Q5TG53 156 aa10.77□□□□□ -0.68
CCDC40-201ENST00000269318 SIGMAR1Q99720 223 aa10.77□□□□□ -0.68
CCDC40-201ENST00000269318 ZNF73O43830 326 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-201ENST00000269318 DIRC1Q969H9 104 aa10.77□□□□□ -0.69
CCDC40-201ENST00000269318 PLA2G2DQ9UNK4 145 aa10.77□□□□□ -0.69
CCDC40-201ENST00000269318 OBSCN-AS1Q96MR7 158 aa10.76□□□□□ -0.69
CCDC40-201ENST00000269318 STARD9Q9P2P6 4700 aa10.76□□□□□ -0.69
CCDC40-201ENST00000269318 FAM240AA0A1B0GVK7 77 aa10.75□□□□□ -0.69
CCDC40-201ENST00000269318 TENM2Q9NT68 2774 aa10.74□□□□□ -0.69
CCDC40-201ENST00000269318 TRBV7-6A0A0J9YX20 115 aa10.74□□□□□ -0.69
CCDC40-201ENST00000269318 NBDYA0A0U1RRE5 68 aa10.74□□□□□ -0.69
CCDC40-201ENST00000269318 hADV29S1A0JD25 119 aa10.74□□□□□ -0.69
CCDC40-201ENST00000269318 XGP55808 180 aa10.74□□□□□ -0.69
CCDC40-201ENST00000269318 IGLV5-37A0A075B6J1 123 aa10.73□□□□□ -0.69
CCDC40-201ENST00000269318 PSCAO43653 123 aa10.73□□□□□ -0.69
CCDC40-201ENST00000269318 SNCGO76070 127 aa10.73□□□□□ -0.69
CCDC40-201ENST00000269318 INAFM2P0DMQ5 153 aa10.73□□□□□ -0.69
CCDC40-201ENST00000269318 ELOF1P60002 83 aaKnown RBP10.73□□□□□ -0.69
CCDC40-201ENST00000269318 LOC107984640A0A0U1RRK4 108 aa10.72□□□□□ -0.69
CCDC40-201ENST00000269318 CNBPP62633 177 aaKnown RBP10.72□□□□□ -0.69
CCDC40-201ENST00000269318 TTC32Q5I0X7 151 aa10.72□□□□□ -0.69
CCDC40-201ENST00000269318 NKAPP1Q8N9T2 125 aa10.72□□□□□ -0.69
CCDC40-201ENST00000269318 COX7BP24311 80 aa10.72□□□□□ -0.69
CCDC40-201ENST00000269318 KRTAP7-1Q8IUC3 87 aa10.72□□□□□ -0.69
CCDC40-201ENST00000269318 C7orf33Q8WU49 177 aa10.72□□□□□ -0.69
CCDC40-201ENST00000269318 FAM168BA1KXE4 195 aa10.71□□□□□ -0.69
CCDC40-201ENST00000269318 TMEM256-PLSCR3K7ERE1 68 aa10.71□□□□□ -0.69
CCDC40-201ENST00000269318 GAGE2BQ13066 116 aa10.71□□□□□ -0.69
CCDC40-201ENST00000269318 MT-ATP8P03928 68 aa10.7□□□□□ -0.7
CCDC40-201ENST00000269318 KCNQ1DNQ9H478 68 aa10.7□□□□□ -0.7
CCDC40-201ENST00000269318 VPS13DQ5THJ4 4388 aa10.69□□□□□ -0.7
CCDC40-201ENST00000269318 PCP4P48539 62 aa10.69□□□□□ -0.7
CCDC40-201ENST00000269318 Q6ZRN7 208 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-201ENST00000269318 LINC00528Q8N1L1 170 aa10.68□□□□□ -0.7
CCDC40-201ENST00000269318 LRCOL1A6NCL2 159 aa10.67□□□□□ -0.7
CCDC40-201ENST00000269318 ACYP1P07311 99 aa10.67□□□□□ -0.7
CCDC40-201ENST00000269318 C14orf177Q52M58 125 aa10.67□□□□□ -0.7
CCDC40-201ENST00000269318 C14orf132Q9NPU4 83 aa10.67□□□□□ -0.7
CCDC40-201ENST00000269318 Q6ZQY7 126 aa10.66□□□□□ -0.7
CCDC40-201ENST00000269318 IGLV1-50A0A075B6I6 118 aa10.64□□□□□ -0.71
CCDC40-201ENST00000269318 JMJD7-PLA2G4BH0Y9G9 81 aa10.64□□□□□ -0.71
CCDC40-201ENST00000269318 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-201ENST00000269318 A0A096LNI7 61 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms