RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 SPAG11BQ08648 103 aa11.46□□□□□ -0.57
RTN1-201ENST00000267484 ATRQ13535 2644 aa11.46□□□□□ -0.57
RTN1-201ENST00000267484 COX17Q14061 63 aa11.46□□□□□ -0.58
RTN1-201ENST00000267484 LINC00575Q6W349 94 aa11.45□□□□□ -0.58
RTN1-201ENST00000267484 KLK12Q9UKR0 248 aa11.45□□□□□ -0.58
RTN1-201ENST00000267484 HIVEP1P15822 2718 aa11.45□□□□□ -0.58
RTN1-201ENST00000267484 CYSRT1A8MQ03 144 aa11.45□□□□□ -0.58
RTN1-201ENST00000267484 UPK3BQ9BT76 320 aa11.45□□□□□ -0.58
RTN1-201ENST00000267484 XAGE1AQ9HD64 81 aa11.44□□□□□ -0.58
RTN1-201ENST00000267484 LAMTOR3Q9UHA4 124 aa11.44□□□□□ -0.58
RTN1-201ENST00000267484 HECTD1Q9ULT8 2610 aa11.44□□□□□ -0.58
RTN1-201ENST00000267484 SMIM9A6NGZ8 99 aa11.42□□□□□ -0.58
RTN1-201ENST00000267484 LYRM9A8MSI8 78 aa11.42□□□□□ -0.58
RTN1-201ENST00000267484 GHRHP01286 108 aa11.42□□□□□ -0.58
RTN1-201ENST00000267484 OTOGQ6ZRI0 2925 aa11.42□□□□□ -0.58
RTN1-201ENST00000267484 DSCR8Q96T75 97 aa11.41□□□□□ -0.58
RTN1-201ENST00000267484 Q6ZQY7 126 aa11.41□□□□□ -0.58
RTN1-201ENST00000267484 RBM3P98179 157 aaKnown RBP11.4□□□□□ -0.58
RTN1-201ENST00000267484 UBL5Q9BZL1 73 aa11.4□□□□□ -0.58
RTN1-201ENST00000267484 PKD1L1Q8TDX9 2849 aa11.4□□□□□ -0.59
RTN1-201ENST00000267484 J3KT08 172 aa11.39□□□□□ -0.59
RTN1-201ENST00000267484 Q6ZQT0 140 aa11.39□□□□□ -0.59
RTN1-201ENST00000267484 FAM19A5Q7Z5A7 132 aaPredicted RBP11.39□□□□□ -0.59
RTN1-201ENST00000267484 TEP1Q99973 2627 aaKnown RBP11.38□□□□□ -0.59
RTN1-201ENST00000267484 TRBV10-3A0A0K0K1G6 114 aa11.38□□□□□ -0.59
RTN1-201ENST00000267484 HAMPP81172 84 aa11.37□□□□□ -0.59
RTN1-201ENST00000267484 Q8NAQ8 132 aa11.36□□□□□ -0.59
RTN1-201ENST00000267484 C6orf48Q9UBA6 75 aa11.36□□□□□ -0.59
RTN1-201ENST00000267484 IGLV6-57P01721 117 aa11.35□□□□□ -0.59
RTN1-201ENST00000267484 HIGD2BQ4VC39 106 aa11.35□□□□□ -0.59
RTN1-201ENST00000267484 ZNF561-AS1K7EIQ3 104 aa11.35□□□□□ -0.59
RTN1-201ENST00000267484 OXTP01178 125 aa11.34□□□□□ -0.59
RTN1-201ENST00000267484 LYPD5Q6UWN5 251 aa11.34□□□□□ -0.59
RTN1-201ENST00000267484 DPH3Q96FX2 82 aa11.34□□□□□ -0.59
RTN1-201ENST00000267484 C20orf197Q8N268 126 aa11.34□□□□□ -0.59
RTN1-201ENST00000267484 LELP1Q5T871 98 aa11.33□□□□□ -0.6
RTN1-201ENST00000267484 A0A0J9YWU9 116 aa11.33□□□□□ -0.6
RTN1-201ENST00000267484 IGHV4-30-4P0DP06 118 aa11.33□□□□□ -0.6
RTN1-201ENST00000267484 C9orf66Q5T8R8 295 aa11.33□□□□□ -0.6
RTN1-201ENST00000267484 ATP5EP2Q5VTU8 51 aa11.33□□□□□ -0.6
RTN1-201ENST00000267484 SCXQ7RTU7 201 aa11.33□□□□□ -0.6
RTN1-201ENST00000267484 TMEM258P61165 79 aa11.32□□□□□ -0.6
RTN1-201ENST00000267484 APOC4P55056 127 aa11.31□□□□□ -0.6
RTN1-201ENST00000267484 LINC01547P58512 204 aaPredicted RBP11.31□□□□□ -0.6
RTN1-201ENST00000267484 Q6ZVQ6 151 aa11.31□□□□□ -0.6
RTN1-201ENST00000267484 F8P00451 2351 aa11.31□□□□□ -0.6
RTN1-201ENST00000267484 NSD1Q96L73 2696 aaPredicted RBP11.3□□□□□ -0.6
RTN1-201ENST00000267484 SPART-AS1P0CW21 52 aa11.3□□□□□ -0.6
RTN1-201ENST00000267484 PRR34Q9NV39 138 aa11.3□□□□□ -0.6
RTN1-201ENST00000267484 TRAV10A0A0B4J240 114 aa11.29□□□□□ -0.6
RTN1-201ENST00000267484 LOC110117498A0A087WWA1 95 aa11.29□□□□□ -0.6
RTN1-201ENST00000267484 DIRC1Q969H9 104 aa11.29□□□□□ -0.6
RTN1-201ENST00000267484 WFDC10BQ8IUB3 73 aa11.28□□□□□ -0.6
RTN1-201ENST00000267484 ZNF73O43830 326 aaPredicted RBP11.28□□□□□ -0.6
RTN1-201ENST00000267484 MIFP14174 115 aa11.26□□□□□ -0.61
RTN1-201ENST00000267484 MUC7Q8TAX7 377 aa11.26□□□□□ -0.61
RTN1-201ENST00000267484 INAFM1C9JVW0 142 aa11.26□□□□□ -0.61
RTN1-201ENST00000267484 CAMK2N2Q96S95 79 aa11.25□□□□□ -0.61
RTN1-201ENST00000267484 RPS28P62857 69 aaKnown RBP11.25□□□□□ -0.61
RTN1-201ENST00000267484 RETNQ9HD89 108 aa11.25□□□□□ -0.61
RTN1-201ENST00000267484 COX7BP24311 80 aa11.25□□□□□ -0.61
RTN1-201ENST00000267484 SNURFQ9Y675 71 aa11.23□□□□□ -0.61
RTN1-201ENST00000267484 Q6ZRU5 148 aa11.23□□□□□ -0.61
RTN1-201ENST00000267484 TENM3Q9P273 2699 aa11.22□□□□□ -0.61
RTN1-201ENST00000267484 GVQW2A0A096LPI5 108 aaPredicted RBP11.22□□□□□ -0.61
RTN1-201ENST00000267484 VPREB1P12018 145 aa11.21□□□□□ -0.61
RTN1-201ENST00000267484 ELOF1P60002 83 aaKnown RBP11.2□□□□□ -0.62
RTN1-201ENST00000267484 Q8N9L7 120 aa11.19□□□□□ -0.62
RTN1-201ENST00000267484 C4orf26Q17RF5 130 aa11.19□□□□□ -0.62
RTN1-201ENST00000267484 TRBV7-4A0A0J9YYF1 115 aa11.19□□□□□ -0.62
RTN1-201ENST00000267484 KPRPQ5T749 579 aaPredicted RBP11.18□□□□□ -0.62
RTN1-201ENST00000267484 RMI2Q96E14 147 aa11.18□□□□□ -0.62
RTN1-201ENST00000267484 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.18□□□□□ -0.62
RTN1-201ENST00000267484 C15orf56Q8N910 161 aa11.17□□□□□ -0.62
RTN1-201ENST00000267484 TRAV7A0A075B6U4 112 aa11.16□□□□□ -0.62
RTN1-201ENST00000267484 TM2D3Q9BRN9 247 aa11.16□□□□□ -0.62
RTN1-201ENST00000267484 KRTAP26-1Q6PEX3 210 aa11.16□□□□□ -0.62
RTN1-201ENST00000267484 Q6ZTC4 211 aa11.16□□□□□ -0.62
RTN1-201ENST00000267484 H7BZZ5 65 aa11.15□□□□□ -0.62
RTN1-201ENST00000267484 Q6ZRP5 223 aa11.15□□□□□ -0.62
RTN1-201ENST00000267484 J3QKU1 62 aa11.15□□□□□ -0.63
RTN1-201ENST00000267484 DEFB105AQ8NG35 78 aa11.15□□□□□ -0.63
RTN1-201ENST00000267484 PDE6GP18545 87 aa11.14□□□□□ -0.63
RTN1-201ENST00000267484 FAM236DA0A1B0GTK5 79 aa11.14□□□□□ -0.63
RTN1-201ENST00000267484 FAM236CP0DP71 79 aa11.14□□□□□ -0.63
RTN1-201ENST00000267484 M0R378 163 aa11.13□□□□□ -0.63
RTN1-201ENST00000267484 CXCL6P80162 114 aa11.13□□□□□ -0.63
RTN1-201ENST00000267484 ANK2Q01484 3957 aa11.13□□□□□ -0.63
RTN1-201ENST00000267484 OXLD1Q5BKU9 147 aa11.13□□□□□ -0.63
RTN1-201ENST00000267484 HRCT1Q6UXD1 115 aa11.13□□□□□ -0.63
RTN1-201ENST00000267484 LINC00528Q8N1L1 170 aa11.13□□□□□ -0.63
RTN1-201ENST00000267484 EGFEM1PQ0D2K5 195 aa11.12□□□□□ -0.63
RTN1-201ENST00000267484 Q5XG85 94 aa11.12□□□□□ -0.63
RTN1-201ENST00000267484 ESRGQ1W209 222 aa11.12□□□□□ -0.63
RTN1-201ENST00000267484 IGKV2D-24A0A075B6R9 120 aa11.12□□□□□ -0.63
RTN1-201ENST00000267484 NDUFC2-KCTD14E9PQ53 114 aa11.12□□□□□ -0.63
RTN1-201ENST00000267484 C3orf84H3BNL1 204 aa11.11□□□□□ -0.63
RTN1-201ENST00000267484 C5orf47Q569G3 176 aa11.1□□□□□ -0.63
RTN1-201ENST00000267484 F8WEM9 126 aa11.09□□□□□ -0.63
RTN1-201ENST00000267484 KMT2BQ9UMN6 2715 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms