RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 PRR3P79522 188 aaKnown RBP7.42□□□□□ -1.22
MSH3-201ENST00000265081 ESRGQ1W209 222 aa7.42□□□□□ -1.22
MSH3-201ENST00000265081 LINC00643Q86TS7 51 aa7.41□□□□□ -1.22
MSH3-201ENST00000265081 TRBV7-6A0A0J9YX20 115 aa7.41□□□□□ -1.22
MSH3-201ENST00000265081 DNAH10OSP0CZ25 163 aa7.41□□□□□ -1.22
MSH3-201ENST00000265081 HTN3P15516 51 aa7.41□□□□□ -1.22
MSH3-201ENST00000265081 LINC00575Q6W349 94 aa7.41□□□□□ -1.22
MSH3-201ENST00000265081 ORMDL1Q9P0S3 153 aa7.41□□□□□ -1.22
MSH3-201ENST00000265081 GAGE2BQ13066 116 aa7.41□□□□□ -1.22
MSH3-201ENST00000265081 GAGE2EQ4V326 116 aa7.41□□□□□ -1.22
MSH3-201ENST00000265081 GAGE2DQ9UEU5 116 aa7.41□□□□□ -1.22
MSH3-201ENST00000265081 DNAL4O96015 105 aa7.4□□□□□ -1.22
MSH3-201ENST00000265081 NDUFV3P56181 108 aaKnown RBP7.4□□□□□ -1.22
MSH3-201ENST00000265081 TM2D3Q9BRN9 247 aa7.4□□□□□ -1.22
MSH3-201ENST00000265081 TTC32Q5I0X7 151 aa7.39□□□□□ -1.23
MSH3-201ENST00000265081 OR13C6PQ8NH95 151 aa7.39□□□□□ -1.23
MSH3-201ENST00000265081 BAHCC1Q9P281 2608 aa7.38□□□□□ -1.23
MSH3-201ENST00000265081 VPREB1P12018 145 aa7.38□□□□□ -1.23
MSH3-201ENST00000265081 TMEM256-PLSCR3K7ERE1 68 aa7.37□□□□□ -1.23
MSH3-201ENST00000265081 NCR3O14931 201 aa7.37□□□□□ -1.23
MSH3-201ENST00000265081 HIST1H4AP62805 103 aaKnown RBP7.37□□□□□ -1.23
MSH3-201ENST00000265081 ATRQ13535 2644 aa7.37□□□□□ -1.23
MSH3-201ENST00000265081 H3BQ85 93 aa7.37□□□□□ -1.23
MSH3-201ENST00000265081 DNAH9Q9NYC9 4486 aa7.36□□□□□ -1.23
MSH3-201ENST00000265081 PKD1L1Q8TDX9 2849 aa7.36□□□□□ -1.23
MSH3-201ENST00000265081 JMJD7-PLA2G4BH0Y9G9 81 aa7.36□□□□□ -1.23
MSH3-201ENST00000265081 CCKP06307 115 aa7.36□□□□□ -1.23
MSH3-201ENST00000265081 C6orf99Q4VX62 202 aa7.36□□□□□ -1.23
MSH3-201ENST00000265081 TLX1NBP0CAT3 122 aa7.36□□□□□ -1.23
MSH3-201ENST00000265081 C11orf45Q8TAV5 145 aa7.36□□□□□ -1.23
MSH3-201ENST00000265081 DEFB131BA0A096LNP1 70 aa7.36□□□□□ -1.23
MSH3-201ENST00000265081 C3orf56Q8N813 242 aa7.36□□□□□ -1.23
MSH3-201ENST00000265081 LOC110117498A0A087WWA1 95 aa7.35□□□□□ -1.23
MSH3-201ENST00000265081 SLPIP03973 132 aa7.35□□□□□ -1.23
MSH3-201ENST00000265081 LINC00526Q96FQ7 95 aa7.35□□□□□ -1.23
MSH3-201ENST00000265081 NDUFC2-KCTD14E9PQ53 114 aa7.35□□□□□ -1.23
MSH3-201ENST00000265081 UPK3BQ9BT76 320 aa7.35□□□□□ -1.23
MSH3-201ENST00000265081 C14orf132Q9NPU4 83 aa7.35□□□□□ -1.23
MSH3-201ENST00000265081 PLA2G2DQ9UNK4 145 aa7.35□□□□□ -1.23
MSH3-201ENST00000265081 MAST4O15021 2626 aa7.35□□□□□ -1.23
MSH3-201ENST00000265081 ELOF1P60002 83 aaKnown RBP7.34□□□□□ -1.23
MSH3-201ENST00000265081 Q6ZRU5 148 aa7.34□□□□□ -1.23
MSH3-201ENST00000265081 Q6JHZ5 121 aa7.34□□□□□ -1.23
MSH3-201ENST00000265081 LYSTQ99698 3801 aa7.34□□□□□ -1.24
MSH3-201ENST00000265081 ANAPC13Q9BS18 74 aa7.33□□□□□ -1.24
MSH3-201ENST00000265081 TRAV23DV6A0A075B6W5 121 aa7.33□□□□□ -1.24
MSH3-201ENST00000265081 TRAV10A0A0B4J240 114 aa7.32□□□□□ -1.24
MSH3-201ENST00000265081 TRBV10-3A0A0K0K1G6 114 aa7.32□□□□□ -1.24
MSH3-201ENST00000265081 hADV29S1A0JD25 119 aa7.32□□□□□ -1.24
MSH3-201ENST00000265081 GAGE2AQ6NT46 116 aa7.32□□□□□ -1.24
MSH3-201ENST00000265081 DNAH7Q8WXX0 4024 aa7.32□□□□□ -1.24
MSH3-201ENST00000265081 S100A7L2Q5SY68 101 aa7.32□□□□□ -1.24
MSH3-201ENST00000265081 IGLV5-37A0A075B6J1 123 aa7.32□□□□□ -1.24
MSH3-201ENST00000265081 LINC00846Q9NV44 126 aa7.32□□□□□ -1.24
MSH3-201ENST00000265081 TENM3Q9P273 2699 aa7.32□□□□□ -1.24
MSH3-201ENST00000265081 ZNF561-AS1K7EIQ3 104 aa7.32□□□□□ -1.24
MSH3-201ENST00000265081 M0R378 163 aa7.31□□□□□ -1.24
MSH3-201ENST00000265081 RPL18AQ02543 176 aaKnown RBP7.31□□□□□ -1.24
MSH3-201ENST00000265081 CAMK2N2Q96S95 79 aa7.31□□□□□ -1.24
MSH3-201ENST00000265081 K7EIL1 84 aa7.31□□□□□ -1.24
MSH3-201ENST00000265081 Q6ZRP5 223 aa7.31□□□□□ -1.24
MSH3-201ENST00000265081 LINC00588Q9Y4M8 146 aa7.3□□□□□ -1.24
MSH3-201ENST00000265081 Q6ZQT0 140 aa7.3□□□□□ -1.24
MSH3-201ENST00000265081 C1orf43Q9BWL3 253 aa7.3□□□□□ -1.24
MSH3-201ENST00000265081 ZNF73O43830 326 aaPredicted RBP7.3□□□□□ -1.24
MSH3-201ENST00000265081 HIGD2BQ4VC39 106 aa7.29□□□□□ -1.24
MSH3-201ENST00000265081 DIRC1Q969H9 104 aa7.29□□□□□ -1.24
MSH3-201ENST00000265081 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.29□□□□□ -1.24
MSH3-201ENST00000265081 LINC00528Q8N1L1 170 aa7.29□□□□□ -1.24
MSH3-201ENST00000265081 KCNQ1DNQ9H478 68 aa7.28□□□□□ -1.24
MSH3-201ENST00000265081 XAGE1AQ9HD64 81 aa7.27□□□□□ -1.24
MSH3-201ENST00000265081 ATP5EP2Q5VTU8 51 aa7.27□□□□□ -1.25
MSH3-201ENST00000265081 DNAH10Q8IVF4 4471 aa7.27□□□□□ -1.25
MSH3-201ENST00000265081 PRKDCP78527 4128 aaKnown RBP7.26□□□□□ -1.25
MSH3-201ENST00000265081 TRBV7-4A0A0J9YYF1 115 aa7.26□□□□□ -1.25
MSH3-201ENST00000265081 KRTAP4-16G5E9R7 235 aaPredicted RBP7.26□□□□□ -1.25
MSH3-201ENST00000265081 SYCNQ0VAF6 134 aa7.26□□□□□ -1.25
MSH3-201ENST00000265081 COX7BP24311 80 aa7.26□□□□□ -1.25
MSH3-201ENST00000265081 CSMD3Q7Z407 3707 aa7.25□□□□□ -1.25
MSH3-201ENST00000265081 PDE6GP18545 87 aa7.25□□□□□ -1.25
MSH3-201ENST00000265081 SPRR1AP35321 89 aa7.25□□□□□ -1.25
MSH3-201ENST00000265081 FAM236AA0A1B0GUQ0 79 aa7.24□□□□□ -1.25
MSH3-201ENST00000265081 FAM236BA0A1B0GV22 79 aa7.24□□□□□ -1.25
MSH3-201ENST00000265081 CCDC179H3BU77 68 aa7.24□□□□□ -1.25
MSH3-201ENST00000265081 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
MSH3-201ENST00000265081 MRAPQ8TCY5 172 aa7.24□□□□□ -1.25
MSH3-201ENST00000265081 IGKV2D-24A0A075B6R9 120 aa7.23□□□□□ -1.25
MSH3-201ENST00000265081 Q6ZQY7 126 aa7.23□□□□□ -1.25
MSH3-201ENST00000265081 RBM3P98179 157 aaKnown RBP7.23□□□□□ -1.25
MSH3-201ENST00000265081 F8P00451 2351 aa7.22□□□□□ -1.25
MSH3-201ENST00000265081 SERTAD4-AS1Q5TG53 156 aa7.22□□□□□ -1.25
MSH3-201ENST00000265081 GHRHP01286 108 aa7.22□□□□□ -1.25
MSH3-201ENST00000265081 CASC10Q5T4H9 136 aa7.21□□□□□ -1.26
MSH3-201ENST00000265081 LINC01547P58512 204 aaPredicted RBP7.21□□□□□ -1.26
MSH3-201ENST00000265081 USP17L23D6RBM5 183 aa7.2□□□□□ -1.26
MSH3-201ENST00000265081 RMI2Q96E14 147 aa7.2□□□□□ -1.26
MSH3-201ENST00000265081 C7orf33Q8WU49 177 aa7.2□□□□□ -1.26
MSH3-201ENST00000265081 IGLV1-50A0A075B6I6 118 aa7.19□□□□□ -1.26
MSH3-201ENST00000265081 PRYO14603 147 aa7.19□□□□□ -1.26
MSH3-201ENST00000265081 PLECQ15149 4684 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms