RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 Q6ZRP5 223 aa14.87□□□□□ -0.03
SMARCB1-201ENST00000263121 RPL13AP40429 203 aaKnown RBP14.86□□□□□ -0.03
SMARCB1-201ENST00000263121 LINC00337Q8N6G1 96 aa14.86□□□□□ -0.03
SMARCB1-201ENST00000263121 Q8NDZ9 215 aa14.86□□□□□ -0.03
SMARCB1-201ENST00000263121 XAGE1AQ9HD64 81 aa14.86□□□□□ -0.03
SMARCB1-201ENST00000263121 TRAV13-2A0A0B4J235 113 aa14.84□□□□□ -0.03
SMARCB1-201ENST00000263121 H7C2G1 150 aa14.84□□□□□ -0.03
SMARCB1-201ENST00000263121 C1orf134Q5TEV5 83 aa14.83□□□□□ -0.04
SMARCB1-201ENST00000263121 GAGE2EQ4V326 116 aa14.82□□□□□ -0.04
SMARCB1-201ENST00000263121 GAGE2DQ9UEU5 116 aa14.82□□□□□ -0.04
SMARCB1-201ENST00000263121 FABP2P12104 132 aa14.81□□□□□ -0.04
SMARCB1-201ENST00000263121 VAMP3Q15836 100 aa14.81□□□□□ -0.04
SMARCB1-201ENST00000263121 Q1RN00 199 aa14.81□□□□□ -0.04
SMARCB1-201ENST00000263121 PRR3P79522 188 aaKnown RBP14.81□□□□□ -0.04
SMARCB1-201ENST00000263121 RPL18AQ02543 176 aaKnown RBP14.81□□□□□ -0.04
SMARCB1-201ENST00000263121 DNAH2Q9P225 4427 aa14.8□□□□□ -0.04
SMARCB1-201ENST00000263121 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.8□□□□□ -0.04
SMARCB1-201ENST00000263121 A0A087WTM6 91 aa14.79□□□□□ -0.04
SMARCB1-201ENST00000263121 LOC107984640A0A0U1RRK4 108 aa14.78□□□□□ -0.04
SMARCB1-201ENST00000263121 C9orf129Q5T035 196 aaKnown RBP14.78□□□□□ -0.04
SMARCB1-201ENST00000263121 Q8N814 137 aa14.78□□□□□ -0.04
SMARCB1-201ENST00000263121 NCR3O14931 201 aa14.76□□□□□ -0.05
SMARCB1-201ENST00000263121 PSMB2P49721 201 aa14.76□□□□□ -0.05
SMARCB1-201ENST00000263121 SPCS1Q9Y6A9 102 aa14.76□□□□□ -0.05
SMARCB1-201ENST00000263121 TRIAP1O43715 76 aa14.75□□□□□ -0.05
SMARCB1-201ENST00000263121 VPREB1P12018 145 aa14.75□□□□□ -0.05
SMARCB1-201ENST00000263121 TRBV10-2A0A0K0K1G8 114 aa14.74□□□□□ -0.05
SMARCB1-201ENST00000263121 K7EP34 96 aa14.74□□□□□ -0.05
SMARCB1-201ENST00000263121 OR13C6PQ8NH95 151 aa14.74□□□□□ -0.05
SMARCB1-201ENST00000263121 LYRM7Q5U5X0 104 aa14.73□□□□□ -0.05
SMARCB1-201ENST00000263121 GAGE10A6NGK3 116 aa14.72□□□□□ -0.05
SMARCB1-201ENST00000263121 GAGE2BQ13066 116 aa14.72□□□□□ -0.05
SMARCB1-201ENST00000263121 C9orf163Q8N9P6 203 aa14.72□□□□□ -0.05
SMARCB1-201ENST00000263121 PLA2G2DQ9UNK4 145 aa14.71□□□□□ -0.05
SMARCB1-201ENST00000263121 RPL28P46779 137 aaKnown RBP14.71□□□□□ -0.06
SMARCB1-201ENST00000263121 UBE2V1Q13404 147 aa14.71□□□□□ -0.06
SMARCB1-201ENST00000263121 GTF2H5Q6ZYL4 71 aa14.71□□□□□ -0.06
SMARCB1-201ENST00000263121 TMEM126AQ9H061 195 aa14.71□□□□□ -0.06
SMARCB1-201ENST00000263121 SCGB1C2P0DMR2 95 aa14.7□□□□□ -0.06
SMARCB1-201ENST00000263121 SMIM11BQ8TCY0 68 aa14.7□□□□□ -0.06
SMARCB1-201ENST00000263121 DNAH17Q9UFH2 4485 aa14.7□□□□□ -0.06
SMARCB1-201ENST00000263121 C16orf90A8MZG2 172 aa14.68□□□□□ -0.06
SMARCB1-201ENST00000263121 A0A096LNI7 61 aa14.68□□□□□ -0.06
SMARCB1-201ENST00000263121 IGLV6-57P01721 117 aa14.68□□□□□ -0.06
SMARCB1-201ENST00000263121 S100A7L2Q5SY68 101 aa14.68□□□□□ -0.06
SMARCB1-201ENST00000263121 SERTAD4-AS1Q5TG53 156 aa14.68□□□□□ -0.06
SMARCB1-201ENST00000263121 HYDINQ4G0P3 5121 aa14.67□□□□□ -0.06
SMARCB1-201ENST00000263121 COX6CP09669 75 aa14.67□□□□□ -0.06
SMARCB1-201ENST00000263121 M0R378 163 aa14.66□□□□□ -0.06
SMARCB1-201ENST00000263121 RTL8CO15255 209 aa14.66□□□□□ -0.06
SMARCB1-201ENST00000263121 TCL1BO95988 128 aa14.66□□□□□ -0.06
SMARCB1-201ENST00000263121 TRBV20-1A0A075B6N2 111 aa14.65□□□□□ -0.06
SMARCB1-201ENST00000263121 PKIGQ9Y2B9 76 aa14.65□□□□□ -0.06
SMARCB1-201ENST00000263121 IGLV5-37A0A075B6J1 123 aa14.65□□□□□ -0.06
SMARCB1-201ENST00000263121 TNP2Q05952 138 aa14.65□□□□□ -0.06
SMARCB1-201ENST00000263121 LCE6AA0A183 80 aa14.64□□□□□ -0.07
SMARCB1-201ENST00000263121 FAM168BA1KXE4 195 aa14.64□□□□□ -0.07
SMARCB1-201ENST00000263121 KRTAP7-1Q8IUC3 87 aa14.64□□□□□ -0.07
SMARCB1-201ENST00000263121 FRAS1Q86XX4 4008 aa14.64□□□□□ -0.07
SMARCB1-201ENST00000263121 SACSQ9NZJ4 4579 aa14.63□□□□□ -0.07
SMARCB1-201ENST00000263121 TRBV10-3A0A0K0K1G6 114 aa14.63□□□□□ -0.07
SMARCB1-201ENST00000263121 SDIM1Q6ZPB5 146 aa14.63□□□□□ -0.07
SMARCB1-201ENST00000263121 LINC01620Q4KN68 170 aa14.61□□□□□ -0.07
SMARCB1-201ENST00000263121 NKAPP1Q8N9T2 125 aa14.61□□□□□ -0.07
SMARCB1-201ENST00000263121 IGKV2-24A0A0C4DH68 120 aa14.61□□□□□ -0.07
SMARCB1-201ENST00000263121 H3BMG7 143 aa14.61□□□□□ -0.07
SMARCB1-201ENST00000263121 CLEC2BQ92478 149 aa14.6□□□□□ -0.07
SMARCB1-201ENST00000263121 ATXN8Q156A1 80 aa14.58□□□□□ -0.08
SMARCB1-201ENST00000263121 FAM19A5Q7Z5A7 132 aaPredicted RBP14.58□□□□□ -0.08
SMARCB1-201ENST00000263121 C7orf33Q8WU49 177 aa14.58□□□□□ -0.08
SMARCB1-201ENST00000263121 CHTF8P0CG12 524 aa14.57□□□□□ -0.08
SMARCB1-201ENST00000263121 TRAV23DV6A0A075B6W5 121 aa14.56□□□□□ -0.08
SMARCB1-201ENST00000263121 LST1O00453 97 aa14.56□□□□□ -0.08
SMARCB1-201ENST00000263121 FUSP35637 526 aaKnown RBP eCLIP14.56□□□□□ -0.08
SMARCB1-201ENST00000263121 C22orf24Q9Y442 160 aa14.56□□□□□ -0.08
SMARCB1-201ENST00000263121 HECTD4Q9Y4D8 3996 aa14.56□□□□□ -0.08
SMARCB1-201ENST00000263121 H0YGX0 51 aa14.55□□□□□ -0.08
SMARCB1-201ENST00000263121 C6orf99Q4VX62 202 aa14.55□□□□□ -0.08
SMARCB1-201ENST00000263121 A0A1W2PNN7 141 aa14.54□□□□□ -0.08
SMARCB1-201ENST00000263121 LINC00474Q9P2X8 69 aa14.54□□□□□ -0.08
SMARCB1-201ENST00000263121 IGLV5-52A0A0A0MRZ9 124 aa14.53□□□□□ -0.08
SMARCB1-201ENST00000263121 FAM218AQ96MZ4 157 aa14.53□□□□□ -0.08
SMARCB1-201ENST00000263121 MRPL55Q7Z7F7 128 aaKnown RBP14.52□□□□□ -0.08
SMARCB1-201ENST00000263121 CBY1Q9Y3M2 126 aa14.52□□□□□ -0.08
SMARCB1-201ENST00000263121 LINC00167Q96N53 147 aa14.51□□□□□ -0.09
SMARCB1-201ENST00000263121 PRO0461Q9UI25 63 aa14.51□□□□□ -0.09
SMARCB1-201ENST00000263121 PANO1I0J062 215 aa14.5□□□□□ -0.09
SMARCB1-201ENST00000263121 ZNF73O43830 326 aaPredicted RBP14.5□□□□□ -0.09
SMARCB1-201ENST00000263121 KCNQ1DNQ9H478 68 aa14.5□□□□□ -0.09
SMARCB1-201ENST00000263121 DNAH11Q96DT5 4516 aa14.5□□□□□ -0.09
SMARCB1-201ENST00000263121 IGLV1-50A0A075B6I6 118 aa14.49□□□□□ -0.09
SMARCB1-201ENST00000263121 M0QXV9 152 aa14.49□□□□□ -0.09
SMARCB1-201ENST00000263121 DIRC1Q969H9 104 aa14.49□□□□□ -0.09
SMARCB1-201ENST00000263121 FAT2Q9NYQ8 4349 aa14.49□□□□□ -0.09
SMARCB1-201ENST00000263121 SPACA4Q8TDM5 124 aa14.49□□□□□ -0.09
SMARCB1-201ENST00000263121 MTURNQ8N3F0 131 aa14.48□□□□□ -0.09
SMARCB1-201ENST00000263121 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.48□□□□□ -0.09
SMARCB1-201ENST00000263121 A0A087WYN8 130 aa14.47□□□□□ -0.09
SMARCB1-201ENST00000263121 F8W1H4 67 aa14.47□□□□□ -0.09
SMARCB1-201ENST00000263121 TRACP01848 142 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms