RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 VAMP3Q15836 100 aa13.82□□□□□ -0.2
CCNE1-201ENST00000262643 LINC00526Q96FQ7 95 aa13.82□□□□□ -0.2
CCNE1-201ENST00000262643 CFAP161Q6P656 301 aa13.81□□□□□ -0.2
CCNE1-201ENST00000262643 SMR3BP02814 79 aaPredicted RBP13.81□□□□□ -0.2
CCNE1-201ENST00000262643 CFC1BP0CG36 223 aa13.81□□□□□ -0.2
CCNE1-201ENST00000262643 CFC1P0CG37 223 aa13.81□□□□□ -0.2
CCNE1-201ENST00000262643 CKS1BP61024 79 aa13.81□□□□□ -0.2
CCNE1-201ENST00000262643 IFITM1P13164 125 aa13.79□□□□□ -0.2
CCNE1-201ENST00000262643 SPAG11BQ08648 103 aa13.79□□□□□ -0.2
CCNE1-201ENST00000262643 SFTA2Q6UW10 78 aa13.79□□□□□ -0.2
CCNE1-201ENST00000262643 PFN2P35080 140 aa13.78□□□□□ -0.2
CCNE1-201ENST00000262643 LINC00158P58513 81 aa13.78□□□□□ -0.2
CCNE1-201ENST00000262643 Q6ZSA8 131 aa13.78□□□□□ -0.2
CCNE1-201ENST00000262643 LINC00308Q8TCZ7 52 aa13.78□□□□□ -0.2
CCNE1-201ENST00000262643 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.76□□□□□ -0.21
CCNE1-201ENST00000262643 A0A1W2PPM0 123 aa13.76□□□□□ -0.21
CCNE1-201ENST00000262643 EPM2AB3EWF7 344 aa13.76□□□□□ -0.21
CCNE1-201ENST00000262643 SOSTDC1Q6X4U4 206 aa13.76□□□□□ -0.21
CCNE1-201ENST00000262643 MIR7-3HGQ8N6C7 128 aa13.76□□□□□ -0.21
CCNE1-201ENST00000262643 ERG28Q9UKR5 140 aa13.76□□□□□ -0.21
CCNE1-201ENST00000262643 CXCL5P42830 114 aa13.75□□□□□ -0.21
CCNE1-201ENST00000262643 C10orf25Q5T742 122 aa13.75□□□□□ -0.21
CCNE1-201ENST00000262643 UNQ6190/PRO20217Q6UXQ8 127 aa13.75□□□□□ -0.21
CCNE1-201ENST00000262643 HIGD2BQ4VC39 106 aa13.74□□□□□ -0.21
CCNE1-201ENST00000262643 A0A0B4J2C4 111 aa13.74□□□□□ -0.21
CCNE1-201ENST00000262643 C9orf116Q5BN46 136 aaPredicted RBP13.74□□□□□ -0.21
CCNE1-201ENST00000262643 PRO1854Q9UHT4 67 aa13.74□□□□□ -0.21
CCNE1-201ENST00000262643 Q5VSD8 79 aa13.73□□□□□ -0.21
CCNE1-201ENST00000262643 C15orf56Q8N910 161 aa13.73□□□□□ -0.21
CCNE1-201ENST00000262643 FABP2P12104 132 aa13.73□□□□□ -0.21
CCNE1-201ENST00000262643 UBE2V1Q13404 147 aa13.73□□□□□ -0.21
CCNE1-201ENST00000262643 COPS9Q8WXC6 57 aa13.73□□□□□ -0.21
CCNE1-201ENST00000262643 TSPAN13O95857 204 aa13.72□□□□□ -0.21
CCNE1-201ENST00000262643 C9orf163Q8N9P6 203 aa13.72□□□□□ -0.21
CCNE1-201ENST00000262643 SCXQ7RTU7 201 aa13.71□□□□□ -0.22
CCNE1-201ENST00000262643 ZNF561-AS1K7EIQ3 104 aa13.7□□□□□ -0.22
CCNE1-201ENST00000262643 GAGE10A6NGK3 116 aa13.69□□□□□ -0.22
CCNE1-201ENST00000262643 SLPIP03973 132 aa13.69□□□□□ -0.22
CCNE1-201ENST00000262643 CNBPP62633 177 aaKnown RBP13.69□□□□□ -0.22
CCNE1-201ENST00000262643 SPCS1Q9Y6A9 102 aa13.69□□□□□ -0.22
CCNE1-201ENST00000262643 FAM229AH3BQW9 127 aa13.68□□□□□ -0.22
CCNE1-201ENST00000262643 K7EP34 96 aa13.68□□□□□ -0.22
CCNE1-201ENST00000262643 VPS13BQ7Z7G8 4022 aa13.67□□□□□ -0.22
CCNE1-201ENST00000262643 H7C2G1 150 aa13.67□□□□□ -0.22
CCNE1-201ENST00000262643 GTF2H5Q6ZYL4 71 aa13.67□□□□□ -0.22
CCNE1-201ENST00000262643 CIRBP-AS1Q8TBR5 109 aa13.66□□□□□ -0.22
CCNE1-201ENST00000262643 PPDPFQ9H3Y8 114 aa13.66□□□□□ -0.22
CCNE1-201ENST00000262643 C6orf48Q9UBA6 75 aa13.66□□□□□ -0.22
CCNE1-201ENST00000262643 COX17Q14061 63 aa13.65□□□□□ -0.22
CCNE1-201ENST00000262643 SDIM1Q6ZPB5 146 aa13.65□□□□□ -0.22
CCNE1-201ENST00000262643 CAMK2N2Q96S95 79 aa13.65□□□□□ -0.22
CCNE1-201ENST00000262643 SRRM2Q9UQ35 2752 aaKnown RBP13.65□□□□□ -0.22
CCNE1-201ENST00000262643 GVQW2A0A096LPI5 108 aaPredicted RBP13.64□□□□□ -0.23
CCNE1-201ENST00000262643 Q1RN00 199 aa13.64□□□□□ -0.23
CCNE1-201ENST00000262643 LOC107984156A0A0G2JMH3 177 aa13.63□□□□□ -0.23
CCNE1-201ENST00000262643 ARL17AQ8IVW1 177 aa13.63□□□□□ -0.23
CCNE1-201ENST00000262643 Q6ZRU5 148 aa13.63□□□□□ -0.23
CCNE1-201ENST00000262643 LINC00528Q8N1L1 170 aa13.63□□□□□ -0.23
CCNE1-201ENST00000262643 SND1-IT1Q9HBX3 110 aa13.63□□□□□ -0.23
CCNE1-201ENST00000262643 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.63□□□□□ -0.23
CCNE1-201ENST00000262643 C2orf48Q96LS8 159 aa13.62□□□□□ -0.23
CCNE1-201ENST00000262643 PANO1I0J062 215 aa13.61□□□□□ -0.23
CCNE1-201ENST00000262643 RPL13AP40429 203 aaKnown RBP13.6□□□□□ -0.23
CCNE1-201ENST00000262643 INAFM2P0DMQ5 153 aa13.59□□□□□ -0.23
CCNE1-201ENST00000262643 PSMB2P49721 201 aa13.59□□□□□ -0.23
CCNE1-201ENST00000262643 TRBV30A0A0K0K1B3 111 aa13.58□□□□□ -0.24
CCNE1-201ENST00000262643 IGKV2-28A0A075B6P5 120 aa13.57□□□□□ -0.24
CCNE1-201ENST00000262643 IGKV2D-28P01615 120 aa13.57□□□□□ -0.24
CCNE1-201ENST00000262643 CHTF8P0CG12 524 aa13.57□□□□□ -0.24
CCNE1-201ENST00000262643 LYRM7Q5U5X0 104 aa13.57□□□□□ -0.24
CCNE1-201ENST00000262643 DPH3Q96FX2 82 aa13.57□□□□□ -0.24
CCNE1-201ENST00000262643 SCGB1C2P0DMR2 95 aa13.56□□□□□ -0.24
CCNE1-201ENST00000262643 SYCNQ0VAF6 134 aa13.56□□□□□ -0.24
CCNE1-201ENST00000262643 PLA2G1BP04054 148 aaKnown RBP13.55□□□□□ -0.24
CCNE1-201ENST00000262643 PRR3P79522 188 aaKnown RBP13.54□□□□□ -0.24
CCNE1-201ENST00000262643 LINC00337Q8N6G1 96 aa13.54□□□□□ -0.24
CCNE1-201ENST00000262643 F8WDY8 70 aa13.54□□□□□ -0.24
CCNE1-201ENST00000262643 H3BMG7 143 aa13.54□□□□□ -0.24
CCNE1-201ENST00000262643 TRIAP1O43715 76 aa13.54□□□□□ -0.24
CCNE1-201ENST00000262643 CARD19Q96LW7 228 aa13.54□□□□□ -0.24
CCNE1-201ENST00000262643 FLG2Q5D862 2391 aaPredicted RBP13.53□□□□□ -0.24
CCNE1-201ENST00000262643 TRAV13-2A0A0B4J235 113 aa13.52□□□□□ -0.24
CCNE1-201ENST00000262643 Q8NDZ9 215 aa13.52□□□□□ -0.24
CCNE1-201ENST00000262643 IGKV2-24A0A0C4DH68 120 aa13.52□□□□□ -0.25
CCNE1-201ENST00000262643 XAGE1AQ9HD64 81 aa13.52□□□□□ -0.25
CCNE1-201ENST00000262643 TCL1BO95988 128 aa13.51□□□□□ -0.25
CCNE1-201ENST00000262643 SPACA4Q8TDM5 124 aa13.51□□□□□ -0.25
CCNE1-201ENST00000262643 TRBV20-1A0A075B6N2 111 aa13.49□□□□□ -0.25
CCNE1-201ENST00000262643 A0A087WYN8 130 aa13.49□□□□□ -0.25
CCNE1-201ENST00000262643 MYCBP2O75592 4640 aa13.49□□□□□ -0.25
CCNE1-201ENST00000262643 NDUFC2-KCTD14E9PQ53 114 aa13.48□□□□□ -0.25
CCNE1-201ENST00000262643 GAGE2EQ4V326 116 aa13.48□□□□□ -0.25
CCNE1-201ENST00000262643 Q6ZRP5 223 aa13.48□□□□□ -0.25
CCNE1-201ENST00000262643 GAGE2DQ9UEU5 116 aa13.48□□□□□ -0.25
CCNE1-201ENST00000262643 A0A096LNI7 61 aa13.47□□□□□ -0.25
CCNE1-201ENST00000262643 NDUFC2O95298 119 aa13.47□□□□□ -0.25
CCNE1-201ENST00000262643 COX6CP09669 75 aa13.47□□□□□ -0.25
CCNE1-201ENST00000262643 OR13C6PQ8NH95 151 aa13.47□□□□□ -0.25
CCNE1-201ENST00000262643 MTURNQ8N3F0 131 aa13.45□□□□□ -0.26
CCNE1-201ENST00000262643 NCR3O14931 201 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms