RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 Q8NAQ8 132 aa5.76□□□□□ -1.49
PTPN3-201ENST00000262539 ZNF73O43830 326 aaPredicted RBP5.76□□□□□ -1.49
PTPN3-201ENST00000262539 KRTAP24-1Q3LI83 254 aa5.76□□□□□ -1.49
PTPN3-201ENST00000262539 MUC4Q99102 2169 aa5.76□□□□□ -1.49
PTPN3-201ENST00000262539 MGAM2Q2M2H8 2515 aa5.76□□□□□ -1.49
PTPN3-201ENST00000262539 ITPR1Q14643 2758 aa5.76□□□□□ -1.49
PTPN3-201ENST00000262539 CYSRT1A8MQ03 144 aa5.75□□□□□ -1.49
PTPN3-201ENST00000262539 C20orf197Q8N268 126 aa5.75□□□□□ -1.49
PTPN3-201ENST00000262539 MDFIQ99750 246 aa5.75□□□□□ -1.49
PTPN3-201ENST00000262539 A6NED7 52 aa5.74□□□□□ -1.49
PTPN3-201ENST00000262539 Q9BRP9 147 aa5.74□□□□□ -1.49
PTPN3-201ENST00000262539 MAST4O15021 2626 aa5.74□□□□□ -1.49
PTPN3-201ENST00000262539 C16orf90A8MZG2 172 aa5.74□□□□□ -1.49
PTPN3-201ENST00000262539 NTM-AS1Q6ZSK4 140 aa5.74□□□□□ -1.49
PTPN3-201ENST00000262539 LINC00643Q86TS7 51 aa5.74□□□□□ -1.49
PTPN3-201ENST00000262539 SNURFQ9Y675 71 aa5.73□□□□□ -1.49
PTPN3-201ENST00000262539 GVQW2A0A096LPI5 108 aaPredicted RBP5.73□□□□□ -1.49
PTPN3-201ENST00000262539 Q6ZSN1 163 aa5.73□□□□□ -1.49
PTPN3-201ENST00000262539 COX6A2Q02221 97 aa5.72□□□□□ -1.49
PTPN3-201ENST00000262539 NSD1Q96L73 2696 aaPredicted RBP5.72□□□□□ -1.49
PTPN3-201ENST00000262539 FAM240AA0A1B0GVK7 77 aa5.71□□□□□ -1.49
PTPN3-201ENST00000262539 NDUFV3P56181 108 aaKnown RBP5.71□□□□□ -1.49
PTPN3-201ENST00000262539 ATP5EP2Q5VTU8 51 aa5.71□□□□□ -1.49
PTPN3-201ENST00000262539 C9orf116Q5BN46 136 aaPredicted RBP5.71□□□□□ -1.49
PTPN3-201ENST00000262539 SMIM11BQ8TCY0 68 aa5.71□□□□□ -1.49
PTPN3-201ENST00000262539 NDUFC2-KCTD14E9PQ53 114 aa5.71□□□□□ -1.5
PTPN3-201ENST00000262539 UNQ6190/PRO20217Q6UXQ8 127 aa5.71□□□□□ -1.5
PTPN3-201ENST00000262539 V9GYY9 64 aa5.71□□□□□ -1.5
PTPN3-201ENST00000262539 SPACA4Q8TDM5 124 aa5.71□□□□□ -1.5
PTPN3-201ENST00000262539 PRR34Q9NV39 138 aa5.71□□□□□ -1.5
PTPN3-201ENST00000262539 TRBV7-6A0A0J9YX20 115 aa5.7□□□□□ -1.5
PTPN3-201ENST00000262539 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.7□□□□□ -1.5
PTPN3-201ENST00000262539 LINC01600Q96MT4 127 aa5.7□□□□□ -1.5
PTPN3-201ENST00000262539 TRIAP1O43715 76 aa5.7□□□□□ -1.5
PTPN3-201ENST00000262539 LYPD5Q6UWN5 251 aa5.69□□□□□ -1.5
PTPN3-201ENST00000262539 CELA1Q9UNI1 258 aa5.69□□□□□ -1.5
PTPN3-201ENST00000262539 TSPEAR-AS2P59090 65 aa5.69□□□□□ -1.5
PTPN3-201ENST00000262539 A0A0U1RQV1 116 aa5.68□□□□□ -1.5
PTPN3-201ENST00000262539 PCOTHQ58A44 107 aa5.68□□□□□ -1.5
PTPN3-201ENST00000262539 COX6B2Q6YFQ2 88 aa5.68□□□□□ -1.5
PTPN3-201ENST00000262539 C7orf65Q6ZTY9 151 aa5.68□□□□□ -1.5
PTPN3-201ENST00000262539 DEFB116Q30KQ4 102 aa5.68□□□□□ -1.5
PTPN3-201ENST00000262539 IGKV2D-30A0A075B6S6 120 aa5.67□□□□□ -1.5
PTPN3-201ENST00000262539 IGKV2-30P06310 120 aa5.67□□□□□ -1.5
PTPN3-201ENST00000262539 TRBV10-3A0A0K0K1G6 114 aa5.67□□□□□ -1.5
PTPN3-201ENST00000262539 Q6JHZ5 121 aa5.67□□□□□ -1.5
PTPN3-201ENST00000262539 IGLV4-60A0A075B6I1 120 aa5.67□□□□□ -1.5
PTPN3-201ENST00000262539 PRLHP81277 87 aa5.66□□□□□ -1.5
PTPN3-201ENST00000262539 KRTAP10-3P60369 221 aa5.66□□□□□ -1.5
PTPN3-201ENST00000262539 SPATA3Q8NHX4 192 aa5.66□□□□□ -1.5
PTPN3-201ENST00000262539 COL6A5A8TX70 2615 aa5.66□□□□□ -1.5
PTPN3-201ENST00000262539 KMT2BQ9UMN6 2715 aaPredicted RBP5.66□□□□□ -1.5
PTPN3-201ENST00000262539 A0A1B0GW54 56 aa5.65□□□□□ -1.5
PTPN3-201ENST00000262539 LINC00208Q96KT6 92 aa5.65□□□□□ -1.5
PTPN3-201ENST00000262539 LITAFQ99732 161 aa5.65□□□□□ -1.5
PTPN3-201ENST00000262539 ITPR2Q14571 2701 aa5.65□□□□□ -1.51
PTPN3-201ENST00000262539 LINC01547P58512 204 aaPredicted RBP5.65□□□□□ -1.51
PTPN3-201ENST00000262539 TM2D3Q9BRN9 247 aa5.65□□□□□ -1.51
PTPN3-201ENST00000262539 DNAH10OSP0CZ25 163 aa5.64□□□□□ -1.51
PTPN3-201ENST00000262539 PRR3P79522 188 aaKnown RBP5.64□□□□□ -1.51
PTPN3-201ENST00000262539 CR1P17927 2039 aa5.64□□□□□ -1.51
PTPN3-201ENST00000262539 ATP5EP56381 51 aaPredicted RBP5.64□□□□□ -1.51
PTPN3-201ENST00000262539 IMUPQ9GZP8 106 aa5.64□□□□□ -1.51
PTPN3-201ENST00000262539 TYMSOSQ8TAI1 123 aa5.63□□□□□ -1.51
PTPN3-201ENST00000262539 WWC2-AS2Q96NR7 200 aa5.63□□□□□ -1.51
PTPN3-201ENST00000262539 RTL8CO15255 209 aa5.63□□□□□ -1.51
PTPN3-201ENST00000262539 HCG22E2RYF7 251 aa5.63□□□□□ -1.51
PTPN3-201ENST00000262539 SETXQ7Z333 2677 aaKnown RBP5.63□□□□□ -1.51
PTPN3-201ENST00000262539 CDH23Q9H251 3354 aa5.63□□□□□ -1.51
PTPN3-201ENST00000262539 VCANP13611 3396 aa5.63□□□□□ -1.51
PTPN3-201ENST00000262539 A0A087WSZ3 146 aa5.62□□□□□ -1.51
PTPN3-201ENST00000262539 A0A0C4DFX4 3053 aa5.62□□□□□ -1.51
PTPN3-201ENST00000262539 MT-ATP8P03928 68 aa5.62□□□□□ -1.51
PTPN3-201ENST00000262539 MOBPQ13875 183 aa5.62□□□□□ -1.51
PTPN3-201ENST00000262539 NDUFC1O43677 76 aa5.62□□□□□ -1.51
PTPN3-201ENST00000262539 EYSQ5T1H1 3165 aa5.62□□□□□ -1.51
PTPN3-201ENST00000262539 APCP25054 2843 aa5.62□□□□□ -1.51
PTPN3-201ENST00000262539 WDFY4Q6ZS81 3184 aa5.62□□□□□ -1.51
PTPN3-201ENST00000262539 hDV103S1A0JD37 113 aa5.62□□□□□ -1.51
PTPN3-201ENST00000262539 RPL37AP61513 92 aaKnown RBP5.62□□□□□ -1.51
PTPN3-201ENST00000262539 CHTF8P0CG12 524 aa5.61□□□□□ -1.51
PTPN3-201ENST00000262539 SMCR5Q8TEV8 140 aa5.61□□□□□ -1.51
PTPN3-201ENST00000262539 H0Y9P7 68 aa5.61□□□□□ -1.51
PTPN3-201ENST00000262539 XIRP2A4UGR9 3374 aa5.61□□□□□ -1.51
PTPN3-201ENST00000262539 CFAP54Q96N23 3096 aa5.61□□□□□ -1.51
PTPN3-201ENST00000262539 UQCRQO14949 82 aa5.61□□□□□ -1.51
PTPN3-201ENST00000262539 PRUNE2Q8WUY3 3088 aa5.61□□□□□ -1.51
PTPN3-201ENST00000262539 UNC80Q8N2C7 3258 aa5.61□□□□□ -1.51
PTPN3-201ENST00000262539 Q6ZRU5 148 aa5.61□□□□□ -1.51
PTPN3-201ENST00000262539 C22orf24Q9Y442 160 aa5.6□□□□□ -1.51
PTPN3-201ENST00000262539 ADAMTSL4-AS1Q5T5F5 129 aa5.6□□□□□ -1.51
PTPN3-201ENST00000262539 Q8N814 137 aa5.6□□□□□ -1.51
PTPN3-201ENST00000262539 REV3LO60673 3130 aa5.6□□□□□ -1.51
PTPN3-201ENST00000262539 KIAA0087Q14695 138 aa5.6□□□□□ -1.51
PTPN3-201ENST00000262539 ATP11AUNQ6ZP68 121 aa5.59□□□□□ -1.51
PTPN3-201ENST00000262539 NIPBLQ6KC79 2804 aaeCLIP5.58□□□□□ -1.52
PTPN3-201ENST00000262539 FAM104AQ969W3 186 aa5.58□□□□□ -1.52
PTPN3-201ENST00000262539 Q9UF83 564 aa5.58□□□□□ -1.52
PTPN3-201ENST00000262539 LINC00575Q6W349 94 aa5.58□□□□□ -1.52
PTPN3-201ENST00000262539 PRO0461Q9UI25 63 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms