RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 HAMPP81172 84 aa11.86□□□□□ -0.51
TRAM1-201ENST00000262213 C20orf197Q8N268 126 aa11.86□□□□□ -0.51
TRAM1-201ENST00000262213 ITPR2Q14571 2701 aa11.85□□□□□ -0.51
TRAM1-201ENST00000262213 OXTP01178 125 aa11.85□□□□□ -0.51
TRAM1-201ENST00000262213 ATP5EP2Q5VTU8 51 aa11.85□□□□□ -0.51
TRAM1-201ENST00000262213 CYSRT1A8MQ03 144 aa11.84□□□□□ -0.51
TRAM1-201ENST00000262213 KRTAP10-3P60369 221 aa11.84□□□□□ -0.51
TRAM1-201ENST00000262213 KRTAP1-1Q07627 177 aa11.84□□□□□ -0.51
TRAM1-201ENST00000262213 Q6ZQY7 126 aa11.84□□□□□ -0.51
TRAM1-201ENST00000262213 IGHV4-28A0A0C4DH34 117 aa11.84□□□□□ -0.51
TRAM1-201ENST00000262213 Q6ZQT0 140 aa11.84□□□□□ -0.51
TRAM1-201ENST00000262213 XAGE1AQ9HD64 81 aa11.84□□□□□ -0.51
TRAM1-201ENST00000262213 SMIM9A6NGZ8 99 aa11.84□□□□□ -0.51
TRAM1-201ENST00000262213 DAD1P61803 113 aa11.84□□□□□ -0.51
TRAM1-201ENST00000262213 KLK12Q9UKR0 248 aa11.83□□□□□ -0.52
TRAM1-201ENST00000262213 HELZ2Q9BYK8 2649 aaKnown RBP11.83□□□□□ -0.52
TRAM1-201ENST00000262213 RPS28P62857 69 aaKnown RBP11.83□□□□□ -0.52
TRAM1-201ENST00000262213 ZNF561-AS1K7EIQ3 104 aa11.82□□□□□ -0.52
TRAM1-201ENST00000262213 CELA1Q9UNI1 258 aa11.82□□□□□ -0.52
TRAM1-201ENST00000262213 LYPD5Q6UWN5 251 aa11.8□□□□□ -0.52
TRAM1-201ENST00000262213 SMR3AQ99954 134 aa11.8□□□□□ -0.52
TRAM1-201ENST00000262213 TRBV10-3A0A0K0K1G6 114 aa11.79□□□□□ -0.52
TRAM1-201ENST00000262213 LYRM9A8MSI8 78 aa11.79□□□□□ -0.52
TRAM1-201ENST00000262213 SCXQ7RTU7 201 aa11.79□□□□□ -0.52
TRAM1-201ENST00000262213 LINC01547P58512 204 aaPredicted RBP11.79□□□□□ -0.52
TRAM1-201ENST00000262213 Q6ZVQ6 151 aa11.78□□□□□ -0.52
TRAM1-201ENST00000262213 PDZD2O15018 2839 aa11.77□□□□□ -0.52
TRAM1-201ENST00000262213 ANK3Q12955 4377 aaKnown RBP11.76□□□□□ -0.53
TRAM1-201ENST00000262213 TRAV10A0A0B4J240 114 aa11.76□□□□□ -0.53
TRAM1-201ENST00000262213 IGLV6-57P01721 117 aa11.76□□□□□ -0.53
TRAM1-201ENST00000262213 LOC110117498A0A087WWA1 95 aa11.75□□□□□ -0.53
TRAM1-201ENST00000262213 C5orf47Q569G3 176 aa11.75□□□□□ -0.53
TRAM1-201ENST00000262213 C4orf26Q17RF5 130 aa11.74□□□□□ -0.53
TRAM1-201ENST00000262213 HIGD2BQ4VC39 106 aa11.73□□□□□ -0.53
TRAM1-201ENST00000262213 DIRC1Q969H9 104 aa11.73□□□□□ -0.53
TRAM1-201ENST00000262213 C6orf48Q9UBA6 75 aa11.73□□□□□ -0.53
TRAM1-201ENST00000262213 SNURFQ9Y675 71 aa11.73□□□□□ -0.53
TRAM1-201ENST00000262213 A0A0J9YWU9 116 aa11.72□□□□□ -0.53
TRAM1-201ENST00000262213 IGHV4-30-4P0DP06 118 aa11.72□□□□□ -0.53
TRAM1-201ENST00000262213 NOTCH2Q04721 2471 aa11.72□□□□□ -0.53
TRAM1-201ENST00000262213 FASNP49327 2511 aaKnown RBP11.72□□□□□ -0.53
TRAM1-201ENST00000262213 UNC79Q9P2D8 2635 aa11.71□□□□□ -0.53
TRAM1-201ENST00000262213 MUC7Q8TAX7 377 aa11.71□□□□□ -0.53
TRAM1-201ENST00000262213 LELP1Q5T871 98 aa11.71□□□□□ -0.54
TRAM1-201ENST00000262213 ZNF73O43830 326 aaPredicted RBP11.7□□□□□ -0.54
TRAM1-201ENST00000262213 HRCT1Q6UXD1 115 aa11.7□□□□□ -0.54
TRAM1-201ENST00000262213 COX7BP24311 80 aa11.69□□□□□ -0.54
TRAM1-201ENST00000262213 FAM236DA0A1B0GTK5 79 aa11.69□□□□□ -0.54
TRAM1-201ENST00000262213 FAM236CP0DP71 79 aa11.69□□□□□ -0.54
TRAM1-201ENST00000262213 TENM1Q9UKZ4 2725 aa11.69□□□□□ -0.54
TRAM1-201ENST00000262213 TRAV7A0A075B6U4 112 aa11.68□□□□□ -0.54
TRAM1-201ENST00000262213 RMI2Q96E14 147 aa11.68□□□□□ -0.54
TRAM1-201ENST00000262213 APOC4P55056 127 aa11.67□□□□□ -0.54
TRAM1-201ENST00000262213 Q8NAQ8 132 aa11.67□□□□□ -0.54
TRAM1-201ENST00000262213 SPART-AS1P0CW21 52 aa11.67□□□□□ -0.54
TRAM1-201ENST00000262213 C9orf66Q5T8R8 295 aa11.66□□□□□ -0.54
TRAM1-201ENST00000262213 Q5XG85 94 aa11.66□□□□□ -0.54
TRAM1-201ENST00000262213 CAMK2N2Q96S95 79 aa11.66□□□□□ -0.54
TRAM1-201ENST00000262213 PRR34Q9NV39 138 aa11.66□□□□□ -0.54
TRAM1-201ENST00000262213 HIVEP1P15822 2718 aa11.66□□□□□ -0.54
TRAM1-201ENST00000262213 NDUFC2-KCTD14E9PQ53 114 aa11.65□□□□□ -0.54
TRAM1-201ENST00000262213 H7BZZ5 65 aa11.65□□□□□ -0.54
TRAM1-201ENST00000262213 ATRQ13535 2644 aa11.65□□□□□ -0.54
TRAM1-201ENST00000262213 PDE6GP18545 87 aa11.63□□□□□ -0.55
TRAM1-201ENST00000262213 Q8N9L7 120 aa11.63□□□□□ -0.55
TRAM1-201ENST00000262213 TM2D3Q9BRN9 247 aa11.63□□□□□ -0.55
TRAM1-201ENST00000262213 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.62□□□□□ -0.55
TRAM1-201ENST00000262213 WFDC10BQ8IUB3 73 aa11.62□□□□□ -0.55
TRAM1-201ENST00000262213 TRBV7-4A0A0J9YYF1 115 aa11.62□□□□□ -0.55
TRAM1-201ENST00000262213 MIFP14174 115 aa11.62□□□□□ -0.55
TRAM1-201ENST00000262213 ELOF1P60002 83 aaKnown RBP11.62□□□□□ -0.55
TRAM1-201ENST00000262213 CXCL6P80162 114 aa11.62□□□□□ -0.55
TRAM1-201ENST00000262213 GVQW2A0A096LPI5 108 aaPredicted RBP11.61□□□□□ -0.55
TRAM1-201ENST00000262213 F8WEM9 126 aa11.61□□□□□ -0.55
TRAM1-201ENST00000262213 Q6ZRU5 148 aa11.6□□□□□ -0.55
TRAM1-201ENST00000262213 VPREB1P12018 145 aa11.6□□□□□ -0.55
TRAM1-201ENST00000262213 HECTD1Q9ULT8 2610 aa11.59□□□□□ -0.55
TRAM1-201ENST00000262213 DEFB105AQ8NG35 78 aa11.57□□□□□ -0.56
TRAM1-201ENST00000262213 PKD1L1Q8TDX9 2849 aa11.57□□□□□ -0.56
TRAM1-201ENST00000262213 TEP1Q99973 2627 aaKnown RBP11.56□□□□□ -0.56
TRAM1-201ENST00000262213 H3BQ85 93 aa11.56□□□□□ -0.56
TRAM1-201ENST00000262213 KLKP1Q107X0 134 aa11.56□□□□□ -0.56
TRAM1-201ENST00000262213 TRRAPQ9Y4A5 3859 aa11.55□□□□□ -0.56
TRAM1-201ENST00000262213 C3orf84H3BNL1 204 aa11.55□□□□□ -0.56
TRAM1-201ENST00000262213 M0R378 163 aa11.55□□□□□ -0.56
TRAM1-201ENST00000262213 BCE1O60756 84 aa11.55□□□□□ -0.56
TRAM1-201ENST00000262213 RETNQ9HD89 108 aa11.55□□□□□ -0.56
TRAM1-201ENST00000262213 SERP1Q9Y6X1 66 aa11.54□□□□□ -0.56
TRAM1-201ENST00000262213 NREPQ16612 68 aa11.53□□□□□ -0.56
TRAM1-201ENST00000262213 BPY2O14599 106 aa11.53□□□□□ -0.56
TRAM1-201ENST00000262213 LINC00528Q8N1L1 170 aa11.53□□□□□ -0.56
TRAM1-201ENST00000262213 KPRPQ5T749 579 aaPredicted RBP11.52□□□□□ -0.56
TRAM1-201ENST00000262213 EGFEM1PQ0D2K5 195 aa11.52□□□□□ -0.57
TRAM1-201ENST00000262213 C15orf56Q8N910 161 aa11.52□□□□□ -0.57
TRAM1-201ENST00000262213 TRBV7-6A0A0J9YX20 115 aa11.51□□□□□ -0.57
TRAM1-201ENST00000262213 Q6ZRP5 223 aa11.51□□□□□ -0.57
TRAM1-201ENST00000262213 INAFM1C9JVW0 142 aa11.5□□□□□ -0.57
TRAM1-201ENST00000262213 IGKV2D-24A0A075B6R9 120 aa11.49□□□□□ -0.57
TRAM1-201ENST00000262213 KRTAP26-1Q6PEX3 210 aa11.48□□□□□ -0.57
TRAM1-201ENST00000262213 OTOGQ6ZRI0 2925 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms