RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 DNAH14Q0VDD8 3507 aa9.97□□□□□ -0.81
CUX2-201ENST00000261726 LINC01561Q8N1V8 128 aa9.96□□□□□ -0.81
CUX2-201ENST00000261726 TET2Q6N021 2002 aaPredicted RBP9.96□□□□□ -0.82
CUX2-201ENST00000261726 TRANK1O15050 2925 aa9.95□□□□□ -0.82
CUX2-201ENST00000261726 LINC00167Q96N53 147 aa9.95□□□□□ -0.82
CUX2-201ENST00000261726 SPINT4Q6UDR6 99 aa9.95□□□□□ -0.82
CUX2-201ENST00000261726 CHTF8P0CG12 524 aa9.95□□□□□ -0.82
CUX2-201ENST00000261726 NHLRC4P0CG21 123 aaPredicted RBP9.94□□□□□ -0.82
CUX2-201ENST00000261726 COX6B2Q6YFQ2 88 aa9.93□□□□□ -0.82
CUX2-201ENST00000261726 A0A1W2PPR1 153 aa9.93□□□□□ -0.82
CUX2-201ENST00000261726 PHF5AQ7RTV0 110 aaKnown RBP9.92□□□□□ -0.82
CUX2-201ENST00000261726 TP53AIP1Q9HCN2 124 aa9.92□□□□□ -0.82
CUX2-201ENST00000261726 SPTBN5Q9NRC6 3674 aaKnown RBP9.91□□□□□ -0.82
CUX2-201ENST00000261726 ATP11AUNQ6ZP68 121 aa9.91□□□□□ -0.82
CUX2-201ENST00000261726 NAV3Q8IVL0 2385 aa9.91□□□□□ -0.82
CUX2-201ENST00000261726 CCDC168Q8NDH2 2452 aa9.9□□□□□ -0.82
CUX2-201ENST00000261726 LINC00313P59037 77 aa9.9□□□□□ -0.82
CUX2-201ENST00000261726 CACNA1AO00555 2505 aa9.89□□□□□ -0.83
CUX2-201ENST00000261726 COX8CQ7Z4L0 72 aa9.89□□□□□ -0.83
CUX2-201ENST00000261726 RPL37AP61513 92 aaKnown RBP9.88□□□□□ -0.83
CUX2-201ENST00000261726 TYMSOSQ8TAI1 123 aa9.88□□□□□ -0.83
CUX2-201ENST00000261726 FAM229AH3BQW9 127 aa9.88□□□□□ -0.83
CUX2-201ENST00000261726 C4orf26Q17RF5 130 aa9.87□□□□□ -0.83
CUX2-201ENST00000261726 CDIP1Q9H305 208 aa9.87□□□□□ -0.83
CUX2-201ENST00000261726 PTPRBP23467 1997 aa9.87□□□□□ -0.83
CUX2-201ENST00000261726 ABCA2Q9BZC7 2435 aa9.87□□□□□ -0.83
CUX2-201ENST00000261726 C2CD3Q4AC94 2353 aa9.86□□□□□ -0.83
CUX2-201ENST00000261726 Q96NJ1 140 aa9.86□□□□□ -0.83
CUX2-201ENST00000261726 C11orf72Q8NBR9 251 aa9.86□□□□□ -0.83
CUX2-201ENST00000261726 PRO0628Q9UI54 55 aa9.86□□□□□ -0.83
CUX2-201ENST00000261726 LINC00476Q8WZB0 136 aa9.85□□□□□ -0.83
CUX2-201ENST00000261726 RTL8CO15255 209 aa9.85□□□□□ -0.83
CUX2-201ENST00000261726 PCSK5Q92824 1860 aa9.84□□□□□ -0.83
CUX2-201ENST00000261726 IGLV5-39A0A0G2JS06 123 aa9.84□□□□□ -0.83
CUX2-201ENST00000261726 FAM218AQ96MZ4 157 aa9.83□□□□□ -0.84
CUX2-201ENST00000261726 EYSQ5T1H1 3165 aa9.83□□□□□ -0.84
CUX2-201ENST00000261726 ST20-AS1Q8NBB2 130 aa9.83□□□□□ -0.84
CUX2-201ENST00000261726 EPM2AB3EWF7 344 aa9.83□□□□□ -0.84
CUX2-201ENST00000261726 KIF25-AS1Q9Y6Z4 181 aa9.83□□□□□ -0.84
CUX2-201ENST00000261726 IGHV3OR16-9A0A0B4J2B5 98 aa9.82□□□□□ -0.84
CUX2-201ENST00000261726 LINC00315P59091 139 aa9.82□□□□□ -0.84
CUX2-201ENST00000261726 Q8NBF4 154 aa9.82□□□□□ -0.84
CUX2-201ENST00000261726 ELOF1P60002 83 aaKnown RBP9.82□□□□□ -0.84
CUX2-201ENST00000261726 SSBP3-AS1Q7Z2R9 100 aa9.82□□□□□ -0.84
CUX2-201ENST00000261726 C16orf90A8MZG2 172 aa9.82□□□□□ -0.84
CUX2-201ENST00000261726 C8orf87E5RJ46 101 aa9.81□□□□□ -0.84
CUX2-201ENST00000261726 MYO18BQ8IUG5 2567 aa9.8□□□□□ -0.84
CUX2-201ENST00000261726 NAV2Q8IVL1 2488 aa9.8□□□□□ -0.84
CUX2-201ENST00000261726 TRAV22A0A0B4J277 110 aa9.79□□□□□ -0.84
CUX2-201ENST00000261726 Q6ZQT0 140 aa9.78□□□□□ -0.84
CUX2-201ENST00000261726 Q6ZRP5 223 aa9.78□□□□□ -0.84
CUX2-201ENST00000261726 Q6ZRX8 168 aa9.78□□□□□ -0.84
CUX2-201ENST00000261726 TM2D3Q9BRN9 247 aa9.77□□□□□ -0.85
CUX2-201ENST00000261726 PIEZO1Q92508 2521 aa9.75□□□□□ -0.85
CUX2-201ENST00000261726 APLNQ9ULZ1 77 aa9.75□□□□□ -0.85
CUX2-201ENST00000261726 REV3LO60673 3130 aa9.74□□□□□ -0.85
CUX2-201ENST00000261726 SMCPP49901 116 aaPredicted RBP9.74□□□□□ -0.85
CUX2-201ENST00000261726 NBDYA0A0U1RRE5 68 aa9.73□□□□□ -0.85
CUX2-201ENST00000261726 H3BPC8 53 aa9.73□□□□□ -0.85
CUX2-201ENST00000261726 LINC01546A6NGU7 62 aa9.72□□□□□ -0.85
CUX2-201ENST00000261726 LINC01600Q96MT4 127 aa9.72□□□□□ -0.85
CUX2-201ENST00000261726 USP34Q70CQ2 3546 aa9.71□□□□□ -0.85
CUX2-201ENST00000261726 LOC110117498A0A087WWA1 95 aa9.7□□□□□ -0.86
CUX2-201ENST00000261726 FAM168BA1KXE4 195 aa9.7□□□□□ -0.86
CUX2-201ENST00000261726 LINC00588Q9Y4M8 146 aa9.7□□□□□ -0.86
CUX2-201ENST00000261726 BCE1O60756 84 aa9.69□□□□□ -0.86
CUX2-201ENST00000261726 FAM19A4Q96LR4 140 aa9.68□□□□□ -0.86
CUX2-201ENST00000261726 A0A1B0GW54 56 aa9.68□□□□□ -0.86
CUX2-201ENST00000261726 TRBV7-4A0A0J9YYF1 115 aa9.68□□□□□ -0.86
CUX2-201ENST00000261726 TRIOO75962 3097 aa9.67□□□□□ -0.86
CUX2-201ENST00000261726 IGLV5-45A0A087WSX0 123 aa9.67□□□□□ -0.86
CUX2-201ENST00000261726 H3BNG1 76 aa9.66□□□□□ -0.86
CUX2-201ENST00000261726 LOC101927531A0A1B0GV80 90 aa9.66□□□□□ -0.86
CUX2-201ENST00000261726 COA5Q86WW8 74 aa9.66□□□□□ -0.86
CUX2-201ENST00000261726 K7EQZ3 153 aa9.65□□□□□ -0.86
CUX2-201ENST00000261726 VPREB1P12018 145 aa9.65□□□□□ -0.87
CUX2-201ENST00000261726 A8MWP4 228 aa9.65□□□□□ -0.87
CUX2-201ENST00000261726 KRTAP24-1Q3LI83 254 aa9.64□□□□□ -0.87
CUX2-201ENST00000261726 DSCR10P59022 87 aa9.64□□□□□ -0.87
CUX2-201ENST00000261726 MRPL34Q9BQ48 92 aaKnown RBP9.64□□□□□ -0.87
CUX2-201ENST00000261726 C9orf92A6NGG3 77 aa9.64□□□□□ -0.87
CUX2-201ENST00000261726 CRIPTQ9P021 101 aa9.64□□□□□ -0.87
CUX2-201ENST00000261726 LAMA1P25391 3075 aa9.63□□□□□ -0.87
CUX2-201ENST00000261726 PIEZO2Q9H5I5 2752 aa9.63□□□□□ -0.87
CUX2-201ENST00000261726 A8MUN3 132 aa9.62□□□□□ -0.87
CUX2-201ENST00000261726 VCANP13611 3396 aa9.62□□□□□ -0.87
CUX2-201ENST00000261726 IGLV6-57P01721 117 aa9.62□□□□□ -0.87
CUX2-201ENST00000261726 GVQW2A0A096LPI5 108 aaPredicted RBP9.62□□□□□ -0.87
CUX2-201ENST00000261726 PRO0461Q9UI25 63 aa9.61□□□□□ -0.87
CUX2-201ENST00000261726 RPS28P62857 69 aaKnown RBP9.6□□□□□ -0.87
CUX2-201ENST00000261726 TNRC18O15417 2968 aaPredicted RBP9.6□□□□□ -0.87
CUX2-201ENST00000261726 Q8NAQ8 132 aa9.6□□□□□ -0.87
CUX2-201ENST00000261726 NCOR2Q9Y618 2525 aa9.59□□□□□ -0.87
CUX2-201ENST00000261726 UQCR11O14957 56 aa9.59□□□□□ -0.87
CUX2-201ENST00000261726 COL6A3P12111 3177 aa9.58□□□□□ -0.88
CUX2-201ENST00000261726 OBSCN-AS1Q96MR7 158 aa9.58□□□□□ -0.88
CUX2-201ENST00000261726 LINC01554Q52M75 96 aa9.56□□□□□ -0.88
CUX2-201ENST00000261726 MIR22HGQ0VDD5 57 aa9.56□□□□□ -0.88
CUX2-201ENST00000261726 COL27A1Q8IZC6 1860 aaPredicted RBP9.56□□□□□ -0.88
CUX2-201ENST00000261726 MYO15AQ9UKN7 3530 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms