RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 LECT2O14960 151 aa12.58□□□□□ -0.4
PDLIM4-201ENST00000253754 KRTAP21-3Q3LHN1 58 aa12.58□□□□□ -0.4
PDLIM4-201ENST00000253754 NCR3O14931 201 aa12.58□□□□□ -0.4
PDLIM4-201ENST00000253754 DNAL4O96015 105 aa12.57□□□□□ -0.4
PDLIM4-201ENST00000253754 H0YGX0 51 aa12.57□□□□□ -0.4
PDLIM4-201ENST00000253754 CCDC179H3BU77 68 aa12.57□□□□□ -0.4
PDLIM4-201ENST00000253754 TTC32Q5I0X7 151 aa12.57□□□□□ -0.4
PDLIM4-201ENST00000253754 C15orf53Q8NAA6 179 aa12.57□□□□□ -0.4
PDLIM4-201ENST00000253754 C11orf45Q8TAV5 145 aa12.57□□□□□ -0.4
PDLIM4-201ENST00000253754 SLPIP03973 132 aa12.56□□□□□ -0.4
PDLIM4-201ENST00000253754 GAGE2BQ13066 116 aa12.56□□□□□ -0.4
PDLIM4-201ENST00000253754 GAGE2EQ4V326 116 aa12.56□□□□□ -0.4
PDLIM4-201ENST00000253754 GAGE2DQ9UEU5 116 aa12.56□□□□□ -0.4
PDLIM4-201ENST00000253754 HUWE1Q7Z6Z7 4374 aaKnown RBP12.56□□□□□ -0.4
PDLIM4-201ENST00000253754 SNCGO76070 127 aa12.55□□□□□ -0.4
PDLIM4-201ENST00000253754 C9orf129Q5T035 196 aaKnown RBP12.55□□□□□ -0.4
PDLIM4-201ENST00000253754 ESRGQ1W209 222 aa12.55□□□□□ -0.4
PDLIM4-201ENST00000253754 H3BNG1 76 aa12.54□□□□□ -0.4
PDLIM4-201ENST00000253754 NDUFC2O95298 119 aa12.54□□□□□ -0.4
PDLIM4-201ENST00000253754 FAM240AA0A1B0GVK7 77 aa12.54□□□□□ -0.4
PDLIM4-201ENST00000253754 STAB2Q8WWQ8 2551 aa12.52□□□□□ -0.41
PDLIM4-201ENST00000253754 HIGD2BQ4VC39 106 aa12.51□□□□□ -0.41
PDLIM4-201ENST00000253754 DEFB131BA0A096LNP1 70 aa12.51□□□□□ -0.41
PDLIM4-201ENST00000253754 C6orf48Q9UBA6 75 aa12.51□□□□□ -0.41
PDLIM4-201ENST00000253754 TMEM126AQ9H061 195 aa12.5□□□□□ -0.41
PDLIM4-201ENST00000253754 TGP01266 2768 aa12.5□□□□□ -0.41
PDLIM4-201ENST00000253754 KRTAP26-1Q6PEX3 210 aa12.49□□□□□ -0.41
PDLIM4-201ENST00000253754 FBN3Q75N90 2809 aa12.48□□□□□ -0.41
PDLIM4-201ENST00000253754 DNAH9Q9NYC9 4486 aa12.48□□□□□ -0.41
PDLIM4-201ENST00000253754 SMCR5Q8TEV8 140 aa12.48□□□□□ -0.41
PDLIM4-201ENST00000253754 XAGE1AQ9HD64 81 aa12.48□□□□□ -0.41
PDLIM4-201ENST00000253754 S100A7L2Q5SY68 101 aa12.47□□□□□ -0.41
PDLIM4-201ENST00000253754 C6orf99Q4VX62 202 aa12.46□□□□□ -0.41
PDLIM4-201ENST00000253754 RPL18AQ02543 176 aaKnown RBP12.46□□□□□ -0.42
PDLIM4-201ENST00000253754 GAGE2AQ6NT46 116 aa12.46□□□□□ -0.42
PDLIM4-201ENST00000253754 C14orf132Q9NPU4 83 aa12.46□□□□□ -0.42
PDLIM4-201ENST00000253754 GVQW2A0A096LPI5 108 aaPredicted RBP12.45□□□□□ -0.42
PDLIM4-201ENST00000253754 INAFM2P0DMQ5 153 aa12.45□□□□□ -0.42
PDLIM4-201ENST00000253754 ZNF561-AS1K7EIQ3 104 aa12.44□□□□□ -0.42
PDLIM4-201ENST00000253754 Q8N814 137 aa12.44□□□□□ -0.42
PDLIM4-201ENST00000253754 C15orf56Q8N910 161 aa12.44□□□□□ -0.42
PDLIM4-201ENST00000253754 ORMDL1Q9P0S3 153 aa12.44□□□□□ -0.42
PDLIM4-201ENST00000253754 ACYP1P07311 99 aa12.43□□□□□ -0.42
PDLIM4-201ENST00000253754 CAMK2N2Q96S95 79 aa12.43□□□□□ -0.42
PDLIM4-201ENST00000253754 B9D2Q9BPU9 175 aa12.42□□□□□ -0.42
PDLIM4-201ENST00000253754 TRAV10A0A0B4J240 114 aa12.41□□□□□ -0.42
PDLIM4-201ENST00000253754 Q6ZRU5 148 aa12.41□□□□□ -0.42
PDLIM4-201ENST00000253754 MUC7Q8TAX7 377 aa12.41□□□□□ -0.42
PDLIM4-201ENST00000253754 OBSCN-AS1Q96MR7 158 aa12.41□□□□□ -0.42
PDLIM4-201ENST00000253754 LINC00167Q96N53 147 aa12.41□□□□□ -0.42
PDLIM4-201ENST00000253754 LINC01556Q5JQF7 62 aa12.4□□□□□ -0.42
PDLIM4-201ENST00000253754 IGKV2D-24A0A075B6R9 120 aa12.4□□□□□ -0.42
PDLIM4-201ENST00000253754 IGLV6-57P01721 117 aa12.4□□□□□ -0.42
PDLIM4-201ENST00000253754 C1orf43Q9BWL3 253 aa12.4□□□□□ -0.42
PDLIM4-201ENST00000253754 TRBV10-3A0A0K0K1G6 114 aa12.37□□□□□ -0.43
PDLIM4-201ENST00000253754 A0A1B0GX51 115 aa12.36□□□□□ -0.43
PDLIM4-201ENST00000253754 LINC00575Q6W349 94 aa12.36□□□□□ -0.43
PDLIM4-201ENST00000253754 SDIM1Q6ZPB5 146 aa12.35□□□□□ -0.43
PDLIM4-201ENST00000253754 TRBV7-7A0A0K0K1E9 115 aa12.34□□□□□ -0.43
PDLIM4-201ENST00000253754 LINC00643Q86TS7 51 aa12.33□□□□□ -0.44
PDLIM4-201ENST00000253754 LINC00588Q9Y4M8 146 aa12.33□□□□□ -0.44
PDLIM4-201ENST00000253754 DNAH10OSP0CZ25 163 aa12.32□□□□□ -0.44
PDLIM4-201ENST00000253754 TRAV23DV6A0A075B6W5 121 aa12.32□□□□□ -0.44
PDLIM4-201ENST00000253754 VPREB1P12018 145 aa12.32□□□□□ -0.44
PDLIM4-201ENST00000253754 CSMD3Q7Z407 3707 aa12.31□□□□□ -0.44
PDLIM4-201ENST00000253754 hADV29S1A0JD25 119 aa12.31□□□□□ -0.44
PDLIM4-201ENST00000253754 C2orf48Q96LS8 159 aa12.31□□□□□ -0.44
PDLIM4-201ENST00000253754 TENM2Q9NT68 2774 aa12.31□□□□□ -0.44
PDLIM4-201ENST00000253754 NDUFC2-KCTD14E9PQ53 114 aa12.31□□□□□ -0.44
PDLIM4-201ENST00000253754 TMEM256-PLSCR3K7ERE1 68 aa12.31□□□□□ -0.44
PDLIM4-201ENST00000253754 Q6ZRP5 223 aa12.31□□□□□ -0.44
PDLIM4-201ENST00000253754 LINC00846Q9NV44 126 aa12.3□□□□□ -0.44
PDLIM4-201ENST00000253754 LYSTQ99698 3801 aa12.3□□□□□ -0.44
PDLIM4-201ENST00000253754 C5orf47Q569G3 176 aa12.28□□□□□ -0.44
PDLIM4-201ENST00000253754 CASC10Q5T4H9 136 aa12.28□□□□□ -0.44
PDLIM4-201ENST00000253754 ZNF73O43830 326 aaPredicted RBP12.27□□□□□ -0.44
PDLIM4-201ENST00000253754 DIRC1Q969H9 104 aa12.27□□□□□ -0.44
PDLIM4-201ENST00000253754 DNAH1Q9P2D7 4330 aa12.27□□□□□ -0.45
PDLIM4-201ENST00000253754 SYCNQ0VAF6 134 aa12.27□□□□□ -0.45
PDLIM4-201ENST00000253754 Q6ZQY7 126 aa12.26□□□□□ -0.45
PDLIM4-201ENST00000253754 JMJD7-PLA2G4BH0Y9G9 81 aa12.25□□□□□ -0.45
PDLIM4-201ENST00000253754 CCKP06307 115 aa12.25□□□□□ -0.45
PDLIM4-201ENST00000253754 IMUPQ9GZP8 106 aa12.25□□□□□ -0.45
PDLIM4-201ENST00000253754 FAM236AA0A1B0GUQ0 79 aa12.24□□□□□ -0.45
PDLIM4-201ENST00000253754 FAM236BA0A1B0GV22 79 aa12.24□□□□□ -0.45
PDLIM4-201ENST00000253754 M0R378 163 aa12.23□□□□□ -0.45
PDLIM4-201ENST00000253754 COX7BP24311 80 aa12.22□□□□□ -0.45
PDLIM4-201ENST00000253754 IGKV3D-7A0A0C4DH55 119 aa12.21□□□□□ -0.45
PDLIM4-201ENST00000253754 ELOF1P60002 83 aaKnown RBP12.21□□□□□ -0.46
PDLIM4-201ENST00000253754 USP17L23D6RBM5 183 aa12.2□□□□□ -0.46
PDLIM4-201ENST00000253754 LAMTOR3Q9UHA4 124 aa12.2□□□□□ -0.46
PDLIM4-201ENST00000253754 SERTAD4-AS1Q5TG53 156 aa12.2□□□□□ -0.46
PDLIM4-201ENST00000253754 C3orf22Q8N5N4 141 aa12.2□□□□□ -0.46
PDLIM4-201ENST00000253754 UQCRQO14949 82 aa12.17□□□□□ -0.46
PDLIM4-201ENST00000253754 DNAH7Q8WXX0 4024 aa12.17□□□□□ -0.46
PDLIM4-201ENST00000253754 F8WDY8 70 aa12.17□□□□□ -0.46
PDLIM4-201ENST00000253754 J3KT08 172 aa12.17□□□□□ -0.46
PDLIM4-201ENST00000253754 RBM3P98179 157 aaKnown RBP12.17□□□□□ -0.46
PDLIM4-201ENST00000253754 C9orf153Q5TBE3 101 aa12.16□□□□□ -0.46
PDLIM4-201ENST00000253754 M0R2N4 97 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms