RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 NDUFC2-KCTD14E9PQ53 114 aa12.93□□□□□ -0.34
SNX4-201ENST00000251775 A0A1B0GUV1 79 aa12.93□□□□□ -0.34
SNX4-201ENST00000251775 C20orf197Q8N268 126 aa12.92□□□□□ -0.34
SNX4-201ENST00000251775 LYRM9A8MSI8 78 aa12.91□□□□□ -0.34
SNX4-201ENST00000251775 OTOGQ6ZRI0 2925 aa12.91□□□□□ -0.34
SNX4-201ENST00000251775 WIPF1O43516 503 aa12.91□□□□□ -0.34
SNX4-201ENST00000251775 C6orf99Q4VX62 202 aa12.91□□□□□ -0.34
SNX4-201ENST00000251775 KIAA0087Q14695 138 aa12.9□□□□□ -0.34
SNX4-201ENST00000251775 Q8NDZ9 215 aa12.9□□□□□ -0.34
SNX4-201ENST00000251775 NSD1Q96L73 2696 aaPredicted RBP12.9□□□□□ -0.35
SNX4-201ENST00000251775 IGHV4-28A0A0C4DH34 117 aa12.89□□□□□ -0.35
SNX4-201ENST00000251775 Q6ZQT0 140 aa12.89□□□□□ -0.35
SNX4-201ENST00000251775 COX17Q14061 63 aa12.88□□□□□ -0.35
SNX4-201ENST00000251775 TENM1Q9UKZ4 2725 aa12.88□□□□□ -0.35
SNX4-201ENST00000251775 HRCT1Q6UXD1 115 aa12.88□□□□□ -0.35
SNX4-201ENST00000251775 LINC00575Q6W349 94 aa12.88□□□□□ -0.35
SNX4-201ENST00000251775 C9orf116Q5BN46 136 aaPredicted RBP12.87□□□□□ -0.35
SNX4-201ENST00000251775 APOC4P55056 127 aa12.87□□□□□ -0.35
SNX4-201ENST00000251775 Q8N3U1 123 aa12.86□□□□□ -0.35
SNX4-201ENST00000251775 M0R2N4 97 aa12.86□□□□□ -0.35
SNX4-201ENST00000251775 RBM3P98179 157 aaKnown RBP12.86□□□□□ -0.35
SNX4-201ENST00000251775 CELA1Q9UNI1 258 aa12.86□□□□□ -0.35
SNX4-201ENST00000251775 LOC110117498A0A087WWA1 95 aa12.84□□□□□ -0.35
SNX4-201ENST00000251775 FAM236DA0A1B0GTK5 79 aa12.84□□□□□ -0.35
SNX4-201ENST00000251775 FAM236CP0DP71 79 aa12.84□□□□□ -0.35
SNX4-201ENST00000251775 DAD1P61803 113 aa12.84□□□□□ -0.35
SNX4-201ENST00000251775 LINC00269Q8N2A0 174 aa12.84□□□□□ -0.35
SNX4-201ENST00000251775 Q8NAQ8 132 aa12.84□□□□□ -0.35
SNX4-201ENST00000251775 ZNF561-AS1K7EIQ3 104 aa12.83□□□□□ -0.36
SNX4-201ENST00000251775 TRAV7A0A075B6U4 112 aa12.83□□□□□ -0.36
SNX4-201ENST00000251775 H7BZZ5 65 aa12.83□□□□□ -0.36
SNX4-201ENST00000251775 CD164L2Q6UWJ8 174 aa12.83□□□□□ -0.36
SNX4-201ENST00000251775 LINC01547P58512 204 aaPredicted RBP12.82□□□□□ -0.36
SNX4-201ENST00000251775 C6orf223Q8N319 242 aa12.82□□□□□ -0.36
SNX4-201ENST00000251775 BCE1O60756 84 aa12.81□□□□□ -0.36
SNX4-201ENST00000251775 LAMTOR3Q9UHA4 124 aa12.81□□□□□ -0.36
SNX4-201ENST00000251775 IGLV10-54A0A075B6I4 117 aa12.8□□□□□ -0.36
SNX4-201ENST00000251775 CHCHD10Q8WYQ3 142 aaPredicted RBP12.8□□□□□ -0.36
SNX4-201ENST00000251775 EPM2AB3EWF7 344 aa12.8□□□□□ -0.36
SNX4-201ENST00000251775 ANGP03950 147 aaKnown RBP12.8□□□□□ -0.36
SNX4-201ENST00000251775 Q6ZVQ6 151 aa12.8□□□□□ -0.36
SNX4-201ENST00000251775 ATRQ13535 2644 aa12.79□□□□□ -0.36
SNX4-201ENST00000251775 MIFP14174 115 aa12.79□□□□□ -0.36
SNX4-201ENST00000251775 TRAV10A0A0B4J240 114 aa12.79□□□□□ -0.36
SNX4-201ENST00000251775 HAMPP81172 84 aa12.78□□□□□ -0.36
SNX4-201ENST00000251775 REG3AQ06141 175 aa12.78□□□□□ -0.36
SNX4-201ENST00000251775 HIVEP1P15822 2718 aa12.78□□□□□ -0.36
SNX4-201ENST00000251775 TEP1Q99973 2627 aaKnown RBP12.77□□□□□ -0.36
SNX4-201ENST00000251775 HTN3P15516 51 aa12.77□□□□□ -0.37
SNX4-201ENST00000251775 KLKP1Q107X0 134 aa12.77□□□□□ -0.37
SNX4-201ENST00000251775 IGHV4-30-4P0DP06 118 aa12.76□□□□□ -0.37
SNX4-201ENST00000251775 SERP1Q9Y6X1 66 aa12.76□□□□□ -0.37
SNX4-201ENST00000251775 SPART-AS1P0CW21 52 aa12.76□□□□□ -0.37
SNX4-201ENST00000251775 C10orf25Q5T742 122 aa12.75□□□□□ -0.37
SNX4-201ENST00000251775 Q6ZQY7 126 aa12.74□□□□□ -0.37
SNX4-201ENST00000251775 IGLV6-57P01721 117 aa12.73□□□□□ -0.37
SNX4-201ENST00000251775 SNURFQ9Y675 71 aa12.73□□□□□ -0.37
SNX4-201ENST00000251775 UNQ6190/PRO20217Q6UXQ8 127 aa12.72□□□□□ -0.37
SNX4-201ENST00000251775 CXCL6P80162 114 aa12.72□□□□□ -0.37
SNX4-201ENST00000251775 RMI2Q96E14 147 aa12.72□□□□□ -0.37
SNX4-201ENST00000251775 TRRAPQ9Y4A5 3859 aa12.72□□□□□ -0.37
SNX4-201ENST00000251775 LELP1Q5T871 98 aa12.7□□□□□ -0.38
SNX4-201ENST00000251775 PDE6GP18545 87 aa12.7□□□□□ -0.38
SNX4-201ENST00000251775 MUC7Q8TAX7 377 aa12.7□□□□□ -0.38
SNX4-201ENST00000251775 SPAG11BQ08648 103 aa12.68□□□□□ -0.38
SNX4-201ENST00000251775 F8WEM9 126 aa12.67□□□□□ -0.38
SNX4-201ENST00000251775 A0A0J9YWU9 116 aa12.67□□□□□ -0.38
SNX4-201ENST00000251775 CYSRT1A8MQ03 144 aa12.66□□□□□ -0.38
SNX4-201ENST00000251775 KLK12Q9UKR0 248 aa12.66□□□□□ -0.38
SNX4-201ENST00000251775 TRBV7-4A0A0J9YYF1 115 aa12.65□□□□□ -0.38
SNX4-201ENST00000251775 SCXQ7RTU7 201 aa12.65□□□□□ -0.38
SNX4-201ENST00000251775 TM2D3Q9BRN9 247 aa12.65□□□□□ -0.38
SNX4-201ENST00000251775 H3BQ85 93 aa12.65□□□□□ -0.38
SNX4-201ENST00000251775 PRR34Q9NV39 138 aa12.64□□□□□ -0.39
SNX4-201ENST00000251775 OXLD1Q5BKU9 147 aa12.64□□□□□ -0.39
SNX4-201ENST00000251775 RETNQ9HD89 108 aa12.63□□□□□ -0.39
SNX4-201ENST00000251775 DIRC1Q969H9 104 aa12.62□□□□□ -0.39
SNX4-201ENST00000251775 FP248Q71RG6 208 aaPredicted RBP12.62□□□□□ -0.39
SNX4-201ENST00000251775 MRAPQ8TCY5 172 aa12.61□□□□□ -0.39
SNX4-201ENST00000251775 KRTAP10-11P60412 298 aa12.61□□□□□ -0.39
SNX4-201ENST00000251775 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.61□□□□□ -0.39
SNX4-201ENST00000251775 LINC00336Q6ZUF6 198 aa12.61□□□□□ -0.39
SNX4-201ENST00000251775 SMIM26A0A096LP01 95 aa12.59□□□□□ -0.39
SNX4-201ENST00000251775 XAGE1AQ9HD64 81 aa12.59□□□□□ -0.39
SNX4-201ENST00000251775 ZNF73O43830 326 aaPredicted RBP12.58□□□□□ -0.4
SNX4-201ENST00000251775 NDUFC1O43677 76 aa12.58□□□□□ -0.4
SNX4-201ENST00000251775 COX7BP24311 80 aa12.58□□□□□ -0.4
SNX4-201ENST00000251775 C6orf48Q9UBA6 75 aa12.57□□□□□ -0.4
SNX4-201ENST00000251775 GVQW2A0A096LPI5 108 aaPredicted RBP12.57□□□□□ -0.4
SNX4-201ENST00000251775 ELOF1P60002 83 aaKnown RBP12.57□□□□□ -0.4
SNX4-201ENST00000251775 TRBV7-6A0A0J9YX20 115 aa12.56□□□□□ -0.4
SNX4-201ENST00000251775 NREPQ16612 68 aa12.56□□□□□ -0.4
SNX4-201ENST00000251775 WFDC10BQ8IUB3 73 aa12.55□□□□□ -0.4
SNX4-201ENST00000251775 KPRPQ5T749 579 aaPredicted RBP12.55□□□□□ -0.4
SNX4-201ENST00000251775 PRO0628Q9UI54 55 aa12.55□□□□□ -0.4
SNX4-201ENST00000251775 BPY2O14599 106 aa12.54□□□□□ -0.4
SNX4-201ENST00000251775 F8P00451 2351 aa12.54□□□□□ -0.4
SNX4-201ENST00000251775 Q6ZTC4 211 aa12.53□□□□□ -0.4
SNX4-201ENST00000251775 LINC00474Q9P2X8 69 aa12.53□□□□□ -0.4
SNX4-201ENST00000251775 TMEM254Q8TBM7 123 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms