RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 COX7A2LO14548 114 aa8.7□□□□□ -1.02
VEGFA-201ENST00000230480 PPDPFLQ8WWR9 84 aa8.7□□□□□ -1.02
VEGFA-201ENST00000230480 GEMIN7Q9H840 131 aaKnown RBP8.7□□□□□ -1.02
VEGFA-201ENST00000230480 IGHV3-64A0A075B6Q5 118 aa8.69□□□□□ -1.02
VEGFA-201ENST00000230480 LINC01549A6NIU2 74 aa8.69□□□□□ -1.02
VEGFA-201ENST00000230480 Q6ZRU5 148 aa8.69□□□□□ -1.02
VEGFA-201ENST00000230480 LINC00528Q8N1L1 170 aa8.69□□□□□ -1.02
VEGFA-201ENST00000230480 SPACA4Q8TDM5 124 aa8.69□□□□□ -1.02
VEGFA-201ENST00000230480 MRPL35Q9NZE8 188 aaKnown RBP8.69□□□□□ -1.02
VEGFA-201ENST00000230480 A0A096LNI7 61 aa8.68□□□□□ -1.02
VEGFA-201ENST00000230480 INAFM2P0DMQ5 153 aa8.68□□□□□ -1.02
VEGFA-201ENST00000230480 C10orf25Q5T742 122 aa8.68□□□□□ -1.02
VEGFA-201ENST00000230480 TIMM17AQ99595 171 aa8.68□□□□□ -1.02
VEGFA-201ENST00000230480 HERC1Q15751 4861 aa8.68□□□□□ -1.02
VEGFA-201ENST00000230480 TRBV20-1A0A075B6N2 111 aa8.67□□□□□ -1.02
VEGFA-201ENST00000230480 A0A087WYN8 130 aa8.67□□□□□ -1.02
VEGFA-201ENST00000230480 A0A087WZ39 114 aa8.67□□□□□ -1.02
VEGFA-201ENST00000230480 TSPAN13O95857 204 aa8.67□□□□□ -1.02
VEGFA-201ENST00000230480 CDIP1Q9H305 208 aa8.67□□□□□ -1.02
VEGFA-201ENST00000230480 FAM229AH3BQW9 127 aa8.66□□□□□ -1.02
VEGFA-201ENST00000230480 SYCNQ0VAF6 134 aa8.66□□□□□ -1.02
VEGFA-201ENST00000230480 PAPPA-AS1Q5QFB9 102 aa8.66□□□□□ -1.02
VEGFA-201ENST00000230480 TTTY13Q9BZ97 58 aa8.66□□□□□ -1.02
VEGFA-201ENST00000230480 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
VEGFA-201ENST00000230480 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.65□□□□□ -1.02
VEGFA-201ENST00000230480 A0A0J9YXV3 536 aa8.65□□□□□ -1.02
VEGFA-201ENST00000230480 SPINK8P0C7L1 97 aa8.65□□□□□ -1.02
VEGFA-201ENST00000230480 TEN1Q86WV5 123 aa8.65□□□□□ -1.02
VEGFA-201ENST00000230480 C2orf48Q96LS8 159 aa8.65□□□□□ -1.02
VEGFA-201ENST00000230480 PLAC8Q9NZF1 115 aa8.65□□□□□ -1.02
VEGFA-201ENST00000230480 UNQ6190/PRO20217Q6UXQ8 127 aa8.64□□□□□ -1.03
VEGFA-201ENST00000230480 CARD19Q96LW7 228 aa8.64□□□□□ -1.03
VEGFA-201ENST00000230480 ZNF561-AS1K7EIQ3 104 aa8.63□□□□□ -1.03
VEGFA-201ENST00000230480 MALP21145 153 aa8.63□□□□□ -1.03
VEGFA-201ENST00000230480 SPAG11BQ08648 103 aa8.63□□□□□ -1.03
VEGFA-201ENST00000230480 SCGB3A1Q96QR1 104 aa8.63□□□□□ -1.03
VEGFA-201ENST00000230480 CDKN2A-AS1Q9UH64 79 aa8.63□□□□□ -1.03
VEGFA-201ENST00000230480 SMCPP49901 116 aaPredicted RBP8.62□□□□□ -1.03
VEGFA-201ENST00000230480 HERVK_113P61574 105 aa8.62□□□□□ -1.03
VEGFA-201ENST00000230480 LINC01561Q8N1V8 128 aa8.62□□□□□ -1.03
VEGFA-201ENST00000230480 LINC01600Q96MT4 127 aa8.62□□□□□ -1.03
VEGFA-201ENST00000230480 C6orf48Q9UBA6 75 aa8.62□□□□□ -1.03
VEGFA-201ENST00000230480 DMBT1Q9UGM3 2413 aaPredicted RBP8.62□□□□□ -1.03
VEGFA-201ENST00000230480 IGLV5-45A0A087WSX0 123 aa8.61□□□□□ -1.03
VEGFA-201ENST00000230480 IGKV2-24A0A0C4DH68 120 aa8.61□□□□□ -1.03
VEGFA-201ENST00000230480 A0A1W2PNN7 141 aa8.61□□□□□ -1.03
VEGFA-201ENST00000230480 C2orf82Q6UX34 121 aa8.61□□□□□ -1.03
VEGFA-201ENST00000230480 KRTAP7-1Q8IUC3 87 aa8.61□□□□□ -1.03
VEGFA-201ENST00000230480 CAMK2N2Q96S95 79 aa8.61□□□□□ -1.03
VEGFA-201ENST00000230480 Q6Q795 121 aa8.6□□□□□ -1.03
VEGFA-201ENST00000230480 ZNF815PA8K554 130 aa8.59□□□□□ -1.03
VEGFA-201ENST00000230480 MT-ATP8P03928 68 aa8.59□□□□□ -1.03
VEGFA-201ENST00000230480 PSMB2P49721 201 aa8.58□□□□□ -1.04
VEGFA-201ENST00000230480 ANAPC13Q9BS18 74 aa8.58□□□□□ -1.04
VEGFA-201ENST00000230480 LOC107984640A0A0U1RRK4 108 aa8.57□□□□□ -1.04
VEGFA-201ENST00000230480 TINCRA0A1B0GVN0 87 aa8.57□□□□□ -1.04
VEGFA-201ENST00000230480 SMIM1B2RUZ4 78 aa8.57□□□□□ -1.04
VEGFA-201ENST00000230480 PLA2G1BP04054 148 aaKnown RBP8.57□□□□□ -1.04
VEGFA-201ENST00000230480 TLX1NBP0CAT3 122 aa8.57□□□□□ -1.04
VEGFA-201ENST00000230480 PMVKQ15126 192 aa8.57□□□□□ -1.04
VEGFA-201ENST00000230480 C9orf116Q5BN46 136 aaPredicted RBP8.57□□□□□ -1.04
VEGFA-201ENST00000230480 Q6ZRP5 223 aa8.57□□□□□ -1.04
VEGFA-201ENST00000230480 F8WDY8 70 aa8.56□□□□□ -1.04
VEGFA-201ENST00000230480 HERVK_113P63121 156 aa8.56□□□□□ -1.04
VEGFA-201ENST00000230480 SRSF9Q13242 221 aaKnown RBP eCLIP8.56□□□□□ -1.04
VEGFA-201ENST00000230480 SCGB1D4Q6XE38 83 aa8.56□□□□□ -1.04
VEGFA-201ENST00000230480 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
VEGFA-201ENST00000230480 NDUFA1O15239 70 aa8.55□□□□□ -1.04
VEGFA-201ENST00000230480 GAGE2BQ13066 116 aa8.55□□□□□ -1.04
VEGFA-201ENST00000230480 KRTAP11-1Q8IUC1 163 aa8.55□□□□□ -1.04
VEGFA-201ENST00000230480 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
VEGFA-201ENST00000230480 TNXBP22105 4242 aa8.54□□□□□ -1.04
VEGFA-201ENST00000230480 FAM168BA1KXE4 195 aa8.54□□□□□ -1.04
VEGFA-201ENST00000230480 C11orf86A6NJI1 115 aa8.54□□□□□ -1.04
VEGFA-201ENST00000230480 TCL1BO95988 128 aa8.54□□□□□ -1.04
VEGFA-201ENST00000230480 RPL37AP61513 92 aaKnown RBP8.54□□□□□ -1.04
VEGFA-201ENST00000230480 Q8IZM0 81 aa8.54□□□□□ -1.04
VEGFA-201ENST00000230480 ANKRD29Q8N6D5 301 aa8.54□□□□□ -1.04
VEGFA-201ENST00000230480 A0A0B4J2C4 111 aa8.53□□□□□ -1.04
VEGFA-201ENST00000230480 SCGB1C2P0DMR2 95 aa8.53□□□□□ -1.04
VEGFA-201ENST00000230480 ZNF22P17026 224 aaPredicted RBP8.53□□□□□ -1.04
VEGFA-201ENST00000230480 PRO1854Q9UHT4 67 aa8.53□□□□□ -1.04
VEGFA-201ENST00000230480 IGLV5-39A0A0G2JS06 123 aa8.52□□□□□ -1.05
VEGFA-201ENST00000230480 RPL13AP40429 203 aaKnown RBP8.52□□□□□ -1.05
VEGFA-201ENST00000230480 C9orf129Q5T035 196 aaKnown RBP8.52□□□□□ -1.05
VEGFA-201ENST00000230480 PLEKHB2Q96CS7 222 aa8.52□□□□□ -1.05
VEGFA-201ENST00000230480 DPH3Q96FX2 82 aa8.52□□□□□ -1.05
VEGFA-201ENST00000230480 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
VEGFA-201ENST00000230480 TRBV30A0A0K0K1B3 111 aa8.51□□□□□ -1.05
VEGFA-201ENST00000230480 SLC25A20O43772 301 aa8.51□□□□□ -1.05
VEGFA-201ENST00000230480 TOMM7Q9P0U1 55 aa8.51□□□□□ -1.05
VEGFA-201ENST00000230480 SNCGO76070 127 aa8.5□□□□□ -1.05
VEGFA-201ENST00000230480 CFC1BP0CG36 223 aa8.5□□□□□ -1.05
VEGFA-201ENST00000230480 CFC1P0CG37 223 aa8.5□□□□□ -1.05
VEGFA-201ENST00000230480 GAGE2EQ4V326 116 aa8.5□□□□□ -1.05
VEGFA-201ENST00000230480 LINC00474Q9P2X8 69 aa8.5□□□□□ -1.05
VEGFA-201ENST00000230480 GAGE2DQ9UEU5 116 aa8.5□□□□□ -1.05
VEGFA-201ENST00000230480 KRTAP29-1A8MX34 341 aaPredicted RBP8.49□□□□□ -1.05
VEGFA-201ENST00000230480 J3QL48 77 aa8.49□□□□□ -1.05
VEGFA-201ENST00000230480 RPL18AQ02543 176 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms