RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CELA1Q9UNI1 258 aa16.92■□□□□ 0.3
RUNDC3A-201ENST00000225441 MRAPQ8TCY5 172 aa16.91■□□□□ 0.3
RUNDC3A-201ENST00000225441 FAM236AA0A1B0GUQ0 79 aa16.91■□□□□ 0.3
RUNDC3A-201ENST00000225441 FAM236BA0A1B0GV22 79 aa16.91■□□□□ 0.3
RUNDC3A-201ENST00000225441 Q8N814 137 aa16.91■□□□□ 0.3
RUNDC3A-201ENST00000225441 TM2D3Q9BRN9 247 aa16.91■□□□□ 0.3
RUNDC3A-201ENST00000225441 TMEM256-PLSCR3K7ERE1 68 aa16.9■□□□□ 0.3
RUNDC3A-201ENST00000225441 C14orf132Q9NPU4 83 aa16.9■□□□□ 0.3
RUNDC3A-201ENST00000225441 PRR34Q9NV39 138 aa16.9■□□□□ 0.3
RUNDC3A-201ENST00000225441 A0A0J9YWU9 116 aa16.89■□□□□ 0.29
RUNDC3A-201ENST00000225441 Q6JHZ5 121 aa16.89■□□□□ 0.29
RUNDC3A-201ENST00000225441 GVQW2A0A096LPI5 108 aaPredicted RBP16.86■□□□□ 0.29
RUNDC3A-201ENST00000225441 IGLV10-54A0A075B6I4 117 aa16.85■□□□□ 0.29
RUNDC3A-201ENST00000225441 CCKP06307 115 aa16.85■□□□□ 0.29
RUNDC3A-201ENST00000225441 SPAG11BQ08648 103 aa16.85■□□□□ 0.29
RUNDC3A-201ENST00000225441 C9orf129Q5T035 196 aaKnown RBP16.85■□□□□ 0.29
RUNDC3A-201ENST00000225441 S100A7L2Q5SY68 101 aa16.84■□□□□ 0.29
RUNDC3A-201ENST00000225441 H3BQ85 93 aa16.84■□□□□ 0.29
RUNDC3A-201ENST00000225441 NCR3O14931 201 aa16.82■□□□□ 0.28
RUNDC3A-201ENST00000225441 SLPIP03973 132 aa16.82■□□□□ 0.28
RUNDC3A-201ENST00000225441 HIST1H4AP62805 103 aaKnown RBP16.82■□□□□ 0.28
RUNDC3A-201ENST00000225441 H3BNG1 76 aa16.81■□□□□ 0.28
RUNDC3A-201ENST00000225441 PRR3P79522 188 aaKnown RBP16.81■□□□□ 0.28
RUNDC3A-201ENST00000225441 SS18L2Q9UHA2 77 aa16.81■□□□□ 0.28
RUNDC3A-201ENST00000225441 Q8N3U1 123 aa16.8■□□□□ 0.28
RUNDC3A-201ENST00000225441 LINC00846Q9NV44 126 aa16.8■□□□□ 0.28
RUNDC3A-201ENST00000225441 B9D2Q9BPU9 175 aa16.79■□□□□ 0.28
RUNDC3A-201ENST00000225441 UQCRQO14949 82 aa16.78■□□□□ 0.28
RUNDC3A-201ENST00000225441 C9orf116Q5BN46 136 aaPredicted RBP16.78■□□□□ 0.28
RUNDC3A-201ENST00000225441 LINC00575Q6W349 94 aa16.78■□□□□ 0.28
RUNDC3A-201ENST00000225441 TENM3Q9P273 2699 aa16.78■□□□□ 0.28
RUNDC3A-201ENST00000225441 ATOX1O00244 68 aa16.77■□□□□ 0.28
RUNDC3A-201ENST00000225441 C6orf99Q4VX62 202 aa16.77■□□□□ 0.27
RUNDC3A-201ENST00000225441 UNQ6190/PRO20217Q6UXQ8 127 aa16.77■□□□□ 0.27
RUNDC3A-201ENST00000225441 C3orf22Q8N5N4 141 aa16.77■□□□□ 0.27
RUNDC3A-201ENST00000225441 ATP5EP2Q5VTU8 51 aa16.76■□□□□ 0.27
RUNDC3A-201ENST00000225441 IGLV6-57P01721 117 aa16.75■□□□□ 0.27
RUNDC3A-201ENST00000225441 KLK12Q9UKR0 248 aa16.75■□□□□ 0.27
RUNDC3A-201ENST00000225441 LYPD5Q6UWN5 251 aa16.75■□□□□ 0.27
RUNDC3A-201ENST00000225441 ENHOQ6UWT2 76 aa16.75■□□□□ 0.27
RUNDC3A-201ENST00000225441 HTN3P15516 51 aa16.74■□□□□ 0.27
RUNDC3A-201ENST00000225441 C10orf25Q5T742 122 aa16.73■□□□□ 0.27
RUNDC3A-201ENST00000225441 C11orf45Q8TAV5 145 aa16.73■□□□□ 0.27
RUNDC3A-201ENST00000225441 LINC00526Q96FQ7 95 aa16.73■□□□□ 0.27
RUNDC3A-201ENST00000225441 hADV29S1A0JD25 119 aa16.71■□□□□ 0.27
RUNDC3A-201ENST00000225441 Q6ZTC4 211 aa16.71■□□□□ 0.27
RUNDC3A-201ENST00000225441 Q8NDZ9 215 aa16.71■□□□□ 0.27
RUNDC3A-201ENST00000225441 C6orf223Q8N319 242 aa16.7■□□□□ 0.26
RUNDC3A-201ENST00000225441 ZNF561-AS1K7EIQ3 104 aa16.69■□□□□ 0.26
RUNDC3A-201ENST00000225441 COX7CP15954 63 aa16.69■□□□□ 0.26
RUNDC3A-201ENST00000225441 RPL18AQ02543 176 aaKnown RBP16.69■□□□□ 0.26
RUNDC3A-201ENST00000225441 GHRHP01286 108 aa16.68■□□□□ 0.26
RUNDC3A-201ENST00000225441 LOC110117498A0A087WWA1 95 aa16.66■□□□□ 0.26
RUNDC3A-201ENST00000225441 TRBV7-6A0A0J9YX20 115 aa16.66■□□□□ 0.26
RUNDC3A-201ENST00000225441 F8WDY8 70 aa16.66■□□□□ 0.26
RUNDC3A-201ENST00000225441 C9orf153Q5TBE3 101 aa16.66■□□□□ 0.26
RUNDC3A-201ENST00000225441 FBN3Q75N90 2809 aa16.65■□□□□ 0.26
RUNDC3A-201ENST00000225441 TRBV10-3A0A0K0K1G6 114 aa16.65■□□□□ 0.26
RUNDC3A-201ENST00000225441 PDE6GP18545 87 aa16.65■□□□□ 0.26
RUNDC3A-201ENST00000225441 C6orf48Q9UBA6 75 aa16.65■□□□□ 0.26
RUNDC3A-201ENST00000225441 HUWE1Q7Z6Z7 4374 aaKnown RBP16.64■□□□□ 0.25
RUNDC3A-201ENST00000225441 IGKV3D-7A0A0C4DH55 119 aa16.63■□□□□ 0.25
RUNDC3A-201ENST00000225441 RBM3P98179 157 aaKnown RBP16.63■□□□□ 0.25
RUNDC3A-201ENST00000225441 C2orf48Q96LS8 159 aa16.63■□□□□ 0.25
RUNDC3A-201ENST00000225441 MEGF8Q7Z7M0 2845 aa16.63■□□□□ 0.25
RUNDC3A-201ENST00000225441 DEFB131BA0A096LNP1 70 aa16.61■□□□□ 0.25
RUNDC3A-201ENST00000225441 DIRC1Q969H9 104 aa16.61■□□□□ 0.25
RUNDC3A-201ENST00000225441 UBL5Q9BZL1 73 aa16.61■□□□□ 0.25
RUNDC3A-201ENST00000225441 CRYGAP11844 174 aa16.6■□□□□ 0.25
RUNDC3A-201ENST00000225441 TRAV23DV6A0A075B6W5 121 aa16.59■□□□□ 0.25
RUNDC3A-201ENST00000225441 DNAH9Q9NYC9 4486 aa16.59■□□□□ 0.25
RUNDC3A-201ENST00000225441 Q6ZQT0 140 aa16.59■□□□□ 0.25
RUNDC3A-201ENST00000225441 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.58■□□□□ 0.24
RUNDC3A-201ENST00000225441 TRAV10A0A0B4J240 114 aa16.57■□□□□ 0.24
RUNDC3A-201ENST00000225441 KRTAP26-1Q6PEX3 210 aa16.57■□□□□ 0.24
RUNDC3A-201ENST00000225441 SERP2Q8N6R1 65 aa16.56■□□□□ 0.24
RUNDC3A-201ENST00000225441 CAMK2N2Q96S95 79 aa16.55■□□□□ 0.24
RUNDC3A-201ENST00000225441 COL7A1Q02388 2944 aa16.55■□□□□ 0.24
RUNDC3A-201ENST00000225441 LAMTOR3Q9UHA4 124 aa16.54■□□□□ 0.24
RUNDC3A-201ENST00000225441 USP17L23D6RBM5 183 aa16.53■□□□□ 0.24
RUNDC3A-201ENST00000225441 M0R378 163 aa16.53■□□□□ 0.24
RUNDC3A-201ENST00000225441 ZNF73O43830 326 aaPredicted RBP16.53■□□□□ 0.24
RUNDC3A-201ENST00000225441 COX7BP24311 80 aa16.53■□□□□ 0.24
RUNDC3A-201ENST00000225441 WFDC10BQ8IUB3 73 aa16.52■□□□□ 0.24
RUNDC3A-201ENST00000225441 VPREB1P12018 145 aa16.52■□□□□ 0.23
RUNDC3A-201ENST00000225441 DSCR8Q96T75 97 aa16.52■□□□□ 0.23
RUNDC3A-201ENST00000225441 ELOF1P60002 83 aaKnown RBP16.51■□□□□ 0.23
RUNDC3A-201ENST00000225441 Q6ZQY7 126 aa16.51■□□□□ 0.23
RUNDC3A-201ENST00000225441 NDUFC2-KCTD14E9PQ53 114 aa16.49■□□□□ 0.23
RUNDC3A-201ENST00000225441 BCE1O60756 84 aa16.49■□□□□ 0.23
RUNDC3A-201ENST00000225441 XAGE1AQ9HD64 81 aa16.49■□□□□ 0.23
RUNDC3A-201ENST00000225441 LINC01556Q5JQF7 62 aa16.48■□□□□ 0.23
RUNDC3A-201ENST00000225441 STAB2Q8WWQ8 2551 aa16.47■□□□□ 0.23
RUNDC3A-201ENST00000225441 A0A087WVE0 104 aa16.46■□□□□ 0.23
RUNDC3A-201ENST00000225441 C15orf56Q8N910 161 aa16.46■□□□□ 0.23
RUNDC3A-201ENST00000225441 C1orf43Q9BWL3 253 aa16.45■□□□□ 0.22
RUNDC3A-201ENST00000225441 HIGD2BQ4VC39 106 aa16.44■□□□□ 0.22
RUNDC3A-201ENST00000225441 Q6ZRU5 148 aa16.44■□□□□ 0.22
RUNDC3A-201ENST00000225441 PRKDCP78527 4128 aaKnown RBP16.44■□□□□ 0.22
RUNDC3A-201ENST00000225441 ESRGQ1W209 222 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms