RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 Q6ZTC4 211 aa10.24□□□□□ -0.77
UBE2D4-201ENST00000222402 C11orf45Q8TAV5 145 aa10.24□□□□□ -0.77
UBE2D4-201ENST00000222402 LYPD5Q6UWN5 251 aa10.24□□□□□ -0.77
UBE2D4-201ENST00000222402 WFDC10BQ8IUB3 73 aa10.24□□□□□ -0.77
UBE2D4-201ENST00000222402 LINC00846Q9NV44 126 aa10.24□□□□□ -0.77
UBE2D4-201ENST00000222402 KLK5Q9Y337 293 aaPredicted RBP10.24□□□□□ -0.77
UBE2D4-201ENST00000222402 TRBV7-7A0A0K0K1E9 115 aa10.23□□□□□ -0.77
UBE2D4-201ENST00000222402 COX7BP24311 80 aa10.23□□□□□ -0.77
UBE2D4-201ENST00000222402 TRAV23DV6A0A075B6W5 121 aa10.22□□□□□ -0.77
UBE2D4-201ENST00000222402 DEFB105AQ8NG35 78 aa10.22□□□□□ -0.77
UBE2D4-201ENST00000222402 SMCR5Q8TEV8 140 aa10.21□□□□□ -0.77
UBE2D4-201ENST00000222402 PPDPFQ9H3Y8 114 aa10.21□□□□□ -0.77
UBE2D4-201ENST00000222402 TRBV10-3A0A0K0K1G6 114 aa10.21□□□□□ -0.78
UBE2D4-201ENST00000222402 A0A087WVE0 104 aa10.21□□□□□ -0.78
UBE2D4-201ENST00000222402 NANOS2P60321 138 aaKnown RBP10.21□□□□□ -0.78
UBE2D4-201ENST00000222402 LINC01600Q96MT4 127 aa10.21□□□□□ -0.78
UBE2D4-201ENST00000222402 KIAA0087Q14695 138 aa10.2□□□□□ -0.78
UBE2D4-201ENST00000222402 A0A0J9YWU9 116 aa10.19□□□□□ -0.78
UBE2D4-201ENST00000222402 CCKP06307 115 aa10.19□□□□□ -0.78
UBE2D4-201ENST00000222402 NHLRC4P0CG21 123 aaPredicted RBP10.19□□□□□ -0.78
UBE2D4-201ENST00000222402 UQCRQO14949 82 aa10.19□□□□□ -0.78
UBE2D4-201ENST00000222402 WFDC9Q8NEX5 89 aa10.18□□□□□ -0.78
UBE2D4-201ENST00000222402 ENHOQ6UWT2 76 aa10.18□□□□□ -0.78
UBE2D4-201ENST00000222402 NOTCH1P46531 2555 aa10.18□□□□□ -0.78
UBE2D4-201ENST00000222402 C9orf129Q5T035 196 aaKnown RBP10.17□□□□□ -0.78
UBE2D4-201ENST00000222402 C3orf22Q8N5N4 141 aa10.17□□□□□ -0.78
UBE2D4-201ENST00000222402 PRB2P02812 416 aaPredicted RBP10.17□□□□□ -0.78
UBE2D4-201ENST00000222402 ZNF73O43830 326 aaPredicted RBP10.16□□□□□ -0.78
UBE2D4-201ENST00000222402 Q6JHZ5 121 aa10.16□□□□□ -0.78
UBE2D4-201ENST00000222402 LINC00575Q6W349 94 aa10.16□□□□□ -0.78
UBE2D4-201ENST00000222402 MUC7Q8TAX7 377 aa10.16□□□□□ -0.78
UBE2D4-201ENST00000222402 NSD1Q96L73 2696 aaPredicted RBP10.15□□□□□ -0.78
UBE2D4-201ENST00000222402 SYCNQ0VAF6 134 aa10.15□□□□□ -0.78
UBE2D4-201ENST00000222402 USP17L23D6RBM5 183 aa10.15□□□□□ -0.78
UBE2D4-201ENST00000222402 TENM4Q6N022 2769 aa10.14□□□□□ -0.79
UBE2D4-201ENST00000222402 C6orf48Q9UBA6 75 aa10.14□□□□□ -0.79
UBE2D4-201ENST00000222402 UPK3BQ9BT76 320 aa10.14□□□□□ -0.79
UBE2D4-201ENST00000222402 STAB1Q9NY15 2570 aa10.14□□□□□ -0.79
UBE2D4-201ENST00000222402 PSCAO43653 123 aa10.13□□□□□ -0.79
UBE2D4-201ENST00000222402 Q6ZRU5 148 aa10.13□□□□□ -0.79
UBE2D4-201ENST00000222402 EGFEM1PQ0D2K5 195 aa10.12□□□□□ -0.79
UBE2D4-201ENST00000222402 M0R378 163 aa10.12□□□□□ -0.79
UBE2D4-201ENST00000222402 UBE2DNLQ8IWF7 75 aa10.12□□□□□ -0.79
UBE2D4-201ENST00000222402 COX7CP15954 63 aa10.12□□□□□ -0.79
UBE2D4-201ENST00000222402 SCXQ7RTU7 201 aa10.12□□□□□ -0.79
UBE2D4-201ENST00000222402 HIVEP1P15822 2718 aa10.11□□□□□ -0.79
UBE2D4-201ENST00000222402 H3BQ85 93 aa10.11□□□□□ -0.79
UBE2D4-201ENST00000222402 PDE6GP18545 87 aa10.11□□□□□ -0.79
UBE2D4-201ENST00000222402 DPH3Q96FX2 82 aa10.11□□□□□ -0.79
UBE2D4-201ENST00000222402 ETDCA0A1B0GVM5 59 aa10.11□□□□□ -0.79
UBE2D4-201ENST00000222402 RMI2Q96E14 147 aa10.11□□□□□ -0.79
UBE2D4-201ENST00000222402 ESRGQ1W209 222 aa10.1□□□□□ -0.79
UBE2D4-201ENST00000222402 ATP5EP2Q5VTU8 51 aa10.09□□□□□ -0.79
UBE2D4-201ENST00000222402 MGAM2Q2M2H8 2515 aa10.09□□□□□ -0.79
UBE2D4-201ENST00000222402 NDUFC2-KCTD14E9PQ53 114 aa10.08□□□□□ -0.8
UBE2D4-201ENST00000222402 FAM19A1Q7Z5A9 133 aa10.07□□□□□ -0.8
UBE2D4-201ENST00000222402 SERP2Q8N6R1 65 aa10.07□□□□□ -0.8
UBE2D4-201ENST00000222402 PRR34Q9NV39 138 aa10.07□□□□□ -0.8
UBE2D4-201ENST00000222402 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.07□□□□□ -0.8
UBE2D4-201ENST00000222402 UBE2BP63146 152 aa10.07□□□□□ -0.8
UBE2D4-201ENST00000222402 COL6A5A8TX70 2615 aa10.06□□□□□ -0.8
UBE2D4-201ENST00000222402 NREPQ16612 68 aa10.05□□□□□ -0.8
UBE2D4-201ENST00000222402 NBPF19A0A087WUL8 3843 aa10.05□□□□□ -0.8
UBE2D4-201ENST00000222402 RPL37AP8A6NKH3 93 aa10.05□□□□□ -0.8
UBE2D4-201ENST00000222402 C20orf197Q8N268 126 aa10.05□□□□□ -0.8
UBE2D4-201ENST00000222402 TRAV10A0A0B4J240 114 aa10.04□□□□□ -0.8
UBE2D4-201ENST00000222402 C22orf24Q9Y442 160 aa10.04□□□□□ -0.8
UBE2D4-201ENST00000222402 VWFP04275 2813 aa10.03□□□□□ -0.8
UBE2D4-201ENST00000222402 F8WEM9 126 aa10.03□□□□□ -0.8
UBE2D4-201ENST00000222402 KRTAP24-1Q3LI83 254 aa10.03□□□□□ -0.8
UBE2D4-201ENST00000222402 C2orf48Q96LS8 159 aa10.02□□□□□ -0.8
UBE2D4-201ENST00000222402 PDZD2O15018 2839 aa10.02□□□□□ -0.8
UBE2D4-201ENST00000222402 IGLV6-57P01721 117 aa10.02□□□□□ -0.81
UBE2D4-201ENST00000222402 KRTAP10-11P60412 298 aa10.02□□□□□ -0.81
UBE2D4-201ENST00000222402 FAM19A5Q7Z5A7 132 aaPredicted RBP10.02□□□□□ -0.81
UBE2D4-201ENST00000222402 IGKV2-24A0A0C4DH68 120 aa10.01□□□□□ -0.81
UBE2D4-201ENST00000222402 FUSP35637 526 aaKnown RBP eCLIP10.01□□□□□ -0.81
UBE2D4-201ENST00000222402 C3orf84H3BNL1 204 aa10.01□□□□□ -0.81
UBE2D4-201ENST00000222402 Q8NDZ9 215 aa10.01□□□□□ -0.81
UBE2D4-201ENST00000222402 GVQW2A0A096LPI5 108 aaPredicted RBP10□□□□□ -0.81
UBE2D4-201ENST00000222402 H3BNG1 76 aa10□□□□□ -0.81
UBE2D4-201ENST00000222402 LINC01556Q5JQF7 62 aa10□□□□□ -0.81
UBE2D4-201ENST00000222402 Q6ZVQ6 151 aa9.99□□□□□ -0.81
UBE2D4-201ENST00000222402 Q6ZQT0 140 aa9.98□□□□□ -0.81
UBE2D4-201ENST00000222402 TENM1Q9UKZ4 2725 aa9.98□□□□□ -0.81
UBE2D4-201ENST00000222402 VPREB1P12018 145 aa9.97□□□□□ -0.81
UBE2D4-201ENST00000222402 J3KT08 172 aa9.97□□□□□ -0.81
UBE2D4-201ENST00000222402 OBSCN-AS1Q96MR7 158 aa9.97□□□□□ -0.81
UBE2D4-201ENST00000222402 NBEAL1Q6ZS30 2694 aa9.96□□□□□ -0.81
UBE2D4-201ENST00000222402 Q6ZRP5 223 aa9.96□□□□□ -0.82
UBE2D4-201ENST00000222402 LINC01547P58512 204 aaPredicted RBP9.96□□□□□ -0.82
UBE2D4-201ENST00000222402 ELOF1P60002 83 aaKnown RBP9.96□□□□□ -0.82
UBE2D4-201ENST00000222402 BPY2O14599 106 aa9.95□□□□□ -0.82
UBE2D4-201ENST00000222402 LINC00167Q96N53 147 aa9.95□□□□□ -0.82
UBE2D4-201ENST00000222402 C15orf56Q8N910 161 aa9.95□□□□□ -0.82
UBE2D4-201ENST00000222402 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.93□□□□□ -0.82
UBE2D4-201ENST00000222402 C7orf33Q8WU49 177 aa9.93□□□□□ -0.82
UBE2D4-201ENST00000222402 OTOGQ6ZRI0 2925 aa9.93□□□□□ -0.82
UBE2D4-201ENST00000222402 ZNF469Q96JG9 3925 aaPredicted RBP9.92□□□□□ -0.82
UBE2D4-201ENST00000222402 HIGD2AQ9BW72 106 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms