RNA–Protein interactions for RNA: ENST00000217260.8

RSPO4-201, Transcript of R-spondin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO4, Length 2,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-201ENST00000217260 KIAA0087Q14695 138 aa12.58□□□□□ -0.4
RSPO4-201ENST00000217260 IGHV4-28A0A0C4DH34 117 aa12.57□□□□□ -0.4
RSPO4-201ENST00000217260 TMEM256-PLSCR3K7ERE1 68 aa12.57□□□□□ -0.4
RSPO4-201ENST00000217260 REG3AQ06141 175 aa12.57□□□□□ -0.4
RSPO4-201ENST00000217260 PRR3P79522 188 aaKnown RBP12.56□□□□□ -0.4
RSPO4-201ENST00000217260 UBL5Q9BZL1 73 aa12.56□□□□□ -0.4
RSPO4-201ENST00000217260 APOC4P55056 127 aa12.56□□□□□ -0.4
RSPO4-201ENST00000217260 C20orf197Q8N268 126 aa12.55□□□□□ -0.4
RSPO4-201ENST00000217260 Q8N814 137 aa12.55□□□□□ -0.4
RSPO4-201ENST00000217260 LINC00167Q96N53 147 aa12.55□□□□□ -0.4
RSPO4-201ENST00000217260 COX17Q14061 63 aa12.54□□□□□ -0.4
RSPO4-201ENST00000217260 LYPD5Q6UWN5 251 aa12.54□□□□□ -0.4
RSPO4-201ENST00000217260 CELA1Q9UNI1 258 aa12.53□□□□□ -0.4
RSPO4-201ENST00000217260 TRBV10-3A0A0K0K1G6 114 aa12.53□□□□□ -0.4
RSPO4-201ENST00000217260 C9orf116Q5BN46 136 aaPredicted RBP12.53□□□□□ -0.4
RSPO4-201ENST00000217260 NANOS2P60321 138 aaKnown RBP12.52□□□□□ -0.41
RSPO4-201ENST00000217260 INAFM1C9JVW0 142 aa12.52□□□□□ -0.41
RSPO4-201ENST00000217260 NOTCH2Q04721 2471 aa12.51□□□□□ -0.41
RSPO4-201ENST00000217260 FAM236DA0A1B0GTK5 79 aa12.51□□□□□ -0.41
RSPO4-201ENST00000217260 FAM236CP0DP71 79 aa12.51□□□□□ -0.41
RSPO4-201ENST00000217260 Q8NAQ8 132 aa12.51□□□□□ -0.41
RSPO4-201ENST00000217260 HTN3P15516 51 aa12.5□□□□□ -0.41
RSPO4-201ENST00000217260 TENM1Q9UKZ4 2725 aa12.5□□□□□ -0.41
RSPO4-201ENST00000217260 MIFP14174 115 aa12.49□□□□□ -0.41
RSPO4-201ENST00000217260 HECTD1Q9ULT8 2610 aa12.48□□□□□ -0.41
RSPO4-201ENST00000217260 KMT2BQ9UMN6 2715 aaPredicted RBP12.47□□□□□ -0.41
RSPO4-201ENST00000217260 SPART-AS1P0CW21 52 aa12.47□□□□□ -0.41
RSPO4-201ENST00000217260 OTOGQ6ZRI0 2925 aa12.46□□□□□ -0.42
RSPO4-201ENST00000217260 LELP1Q5T871 98 aa12.46□□□□□ -0.42
RSPO4-201ENST00000217260 C6orf223Q8N319 242 aa12.45□□□□□ -0.42
RSPO4-201ENST00000217260 Q8NDZ9 215 aa12.45□□□□□ -0.42
RSPO4-201ENST00000217260 C10orf25Q5T742 122 aa12.45□□□□□ -0.42
RSPO4-201ENST00000217260 NSD1Q96L73 2696 aaPredicted RBP12.44□□□□□ -0.42
RSPO4-201ENST00000217260 TRAV7A0A075B6U4 112 aa12.44□□□□□ -0.42
RSPO4-201ENST00000217260 SPAG11BQ08648 103 aa12.44□□□□□ -0.42
RSPO4-201ENST00000217260 UNQ6190/PRO20217Q6UXQ8 127 aa12.44□□□□□ -0.42
RSPO4-201ENST00000217260 SERP1Q9Y6X1 66 aa12.44□□□□□ -0.42
RSPO4-201ENST00000217260 RBM3P98179 157 aaKnown RBP12.43□□□□□ -0.42
RSPO4-201ENST00000217260 KLK12Q9UKR0 248 aa12.43□□□□□ -0.42
RSPO4-201ENST00000217260 H7BZZ5 65 aa12.43□□□□□ -0.42
RSPO4-201ENST00000217260 BCE1O60756 84 aa12.43□□□□□ -0.42
RSPO4-201ENST00000217260 C6orf99Q4VX62 202 aa12.42□□□□□ -0.42
RSPO4-201ENST00000217260 MRAPQ8TCY5 172 aa12.42□□□□□ -0.42
RSPO4-201ENST00000217260 IGHV4-30-4P0DP06 118 aa12.41□□□□□ -0.42
RSPO4-201ENST00000217260 ATRQ13535 2644 aa12.41□□□□□ -0.42
RSPO4-201ENST00000217260 Q6ZQT0 140 aa12.41□□□□□ -0.42
RSPO4-201ENST00000217260 CYSRT1A8MQ03 144 aa12.4□□□□□ -0.42
RSPO4-201ENST00000217260 PRR34Q9NV39 138 aa12.4□□□□□ -0.42
RSPO4-201ENST00000217260 HAMPP81172 84 aa12.4□□□□□ -0.42
RSPO4-201ENST00000217260 LAMTOR3Q9UHA4 124 aa12.4□□□□□ -0.42
RSPO4-201ENST00000217260 LINC01547P58512 204 aaPredicted RBP12.39□□□□□ -0.43
RSPO4-201ENST00000217260 A0A0J9YWU9 116 aa12.38□□□□□ -0.43
RSPO4-201ENST00000217260 EPM2AB3EWF7 344 aa12.38□□□□□ -0.43
RSPO4-201ENST00000217260 LINC00575Q6W349 94 aa12.38□□□□□ -0.43
RSPO4-201ENST00000217260 TEP1Q99973 2627 aaKnown RBP12.37□□□□□ -0.43
RSPO4-201ENST00000217260 ZNF561-AS1K7EIQ3 104 aa12.37□□□□□ -0.43
RSPO4-201ENST00000217260 KLKP1Q107X0 134 aa12.37□□□□□ -0.43
RSPO4-201ENST00000217260 MUC7Q8TAX7 377 aa12.37□□□□□ -0.43
RSPO4-201ENST00000217260 TRRAPQ9Y4A5 3859 aa12.37□□□□□ -0.43
RSPO4-201ENST00000217260 LOC110117498A0A087WWA1 95 aa12.37□□□□□ -0.43
RSPO4-201ENST00000217260 SNURFQ9Y675 71 aa12.36□□□□□ -0.43
RSPO4-201ENST00000217260 Q6ZVQ6 151 aa12.35□□□□□ -0.43
RSPO4-201ENST00000217260 TRAV10A0A0B4J240 114 aa12.35□□□□□ -0.43
RSPO4-201ENST00000217260 HIVEP1P15822 2718 aa12.35□□□□□ -0.43
RSPO4-201ENST00000217260 RMI2Q96E14 147 aa12.33□□□□□ -0.44
RSPO4-201ENST00000217260 M0R2N4 97 aa12.33□□□□□ -0.44
RSPO4-201ENST00000217260 PRO0628Q9UI54 55 aa12.32□□□□□ -0.44
RSPO4-201ENST00000217260 F8WEM9 126 aa12.31□□□□□ -0.44
RSPO4-201ENST00000217260 IGLV6-57P01721 117 aa12.31□□□□□ -0.44
RSPO4-201ENST00000217260 LINC00336Q6ZUF6 198 aa12.31□□□□□ -0.44
RSPO4-201ENST00000217260 GVQW2A0A096LPI5 108 aaPredicted RBP12.31□□□□□ -0.44
RSPO4-201ENST00000217260 C6orf48Q9UBA6 75 aa12.31□□□□□ -0.44
RSPO4-201ENST00000217260 SMIM26A0A096LP01 95 aa12.3□□□□□ -0.44
RSPO4-201ENST00000217260 CXCL6P80162 114 aa12.3□□□□□ -0.44
RSPO4-201ENST00000217260 PDE6GP18545 87 aa12.29□□□□□ -0.44
RSPO4-201ENST00000217260 XAGE1AQ9HD64 81 aa12.29□□□□□ -0.44
RSPO4-201ENST00000217260 WFDC10BQ8IUB3 73 aa12.28□□□□□ -0.44
RSPO4-201ENST00000217260 Q6ZQY7 126 aa12.27□□□□□ -0.45
RSPO4-201ENST00000217260 KPRPQ5T749 579 aaPredicted RBP12.26□□□□□ -0.45
RSPO4-201ENST00000217260 RETNQ9HD89 108 aa12.26□□□□□ -0.45
RSPO4-201ENST00000217260 NDUFC1O43677 76 aa12.25□□□□□ -0.45
RSPO4-201ENST00000217260 HIGD2BQ4VC39 106 aa12.25□□□□□ -0.45
RSPO4-201ENST00000217260 FP248Q71RG6 208 aaPredicted RBP12.24□□□□□ -0.45
RSPO4-201ENST00000217260 H3BQ85 93 aa12.24□□□□□ -0.45
RSPO4-201ENST00000217260 OXLD1Q5BKU9 147 aa12.24□□□□□ -0.45
RSPO4-201ENST00000217260 TM2D3Q9BRN9 247 aa12.24□□□□□ -0.45
RSPO4-201ENST00000217260 CAMK2N2Q96S95 79 aa12.23□□□□□ -0.45
RSPO4-201ENST00000217260 H3BNG1 76 aa12.23□□□□□ -0.45
RSPO4-201ENST00000217260 SCXQ7RTU7 201 aa12.22□□□□□ -0.45
RSPO4-201ENST00000217260 DIRC1Q969H9 104 aa12.22□□□□□ -0.45
RSPO4-201ENST00000217260 Q6ZTC4 211 aa12.22□□□□□ -0.45
RSPO4-201ENST00000217260 TRBV7-6A0A0J9YX20 115 aa12.21□□□□□ -0.45
RSPO4-201ENST00000217260 C1orf43Q9BWL3 253 aa12.21□□□□□ -0.45
RSPO4-201ENST00000217260 KRTAP26-1Q6PEX3 210 aa12.2□□□□□ -0.46
RSPO4-201ENST00000217260 TRBV7-4A0A0J9YYF1 115 aa12.2□□□□□ -0.46
RSPO4-201ENST00000217260 ATP5EP56381 51 aaPredicted RBP12.2□□□□□ -0.46
RSPO4-201ENST00000217260 KRTAP10-11P60412 298 aa12.19□□□□□ -0.46
RSPO4-201ENST00000217260 ZNF73O43830 326 aaPredicted RBP12.19□□□□□ -0.46
RSPO4-201ENST00000217260 Q6ZRU5 148 aa12.18□□□□□ -0.46
RSPO4-201ENST00000217260 EGFEM1PQ0D2K5 195 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms