RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 C21orf62-AS1Q17RA5 79 aa11.4□□□□□ -0.58
RABGGTA-201ENST00000216840 CARD19Q96LW7 228 aa11.4□□□□□ -0.58
RABGGTA-201ENST00000216840 H3BT86 120 aa11.39□□□□□ -0.59
RABGGTA-201ENST00000216840 J3QR89 54 aa11.39□□□□□ -0.59
RABGGTA-201ENST00000216840 PPDPFLQ8WWR9 84 aa11.39□□□□□ -0.59
RABGGTA-201ENST00000216840 VPS25Q9BRG1 176 aa11.39□□□□□ -0.59
RABGGTA-201ENST00000216840 DNAH1Q9P2D7 4330 aa11.38□□□□□ -0.59
RABGGTA-201ENST00000216840 TRACP01848 142 aa11.38□□□□□ -0.59
RABGGTA-201ENST00000216840 APLNQ9ULZ1 77 aa11.38□□□□□ -0.59
RABGGTA-201ENST00000216840 DYNC2H1Q8NCM8 4307 aaKnown RBP11.38□□□□□ -0.59
RABGGTA-201ENST00000216840 F8WDY8 70 aa11.37□□□□□ -0.59
RABGGTA-201ENST00000216840 NCR3O14931 201 aa11.37□□□□□ -0.59
RABGGTA-201ENST00000216840 NHLRC4P0CG21 123 aaPredicted RBP11.37□□□□□ -0.59
RABGGTA-201ENST00000216840 TMEM126AQ9H061 195 aa11.36□□□□□ -0.59
RABGGTA-201ENST00000216840 H0YGX0 51 aa11.36□□□□□ -0.59
RABGGTA-201ENST00000216840 CASC10Q5T4H9 136 aa11.36□□□□□ -0.59
RABGGTA-201ENST00000216840 RMI2Q96E14 147 aa11.36□□□□□ -0.59
RABGGTA-201ENST00000216840 XAGE1AQ9HD64 81 aa11.36□□□□□ -0.59
RABGGTA-201ENST00000216840 SYCNQ0VAF6 134 aa11.34□□□□□ -0.59
RABGGTA-201ENST00000216840 A0A087WYN8 130 aa11.32□□□□□ -0.6
RABGGTA-201ENST00000216840 NDUFC2-KCTD14E9PQ53 114 aa11.32□□□□□ -0.6
RABGGTA-201ENST00000216840 USP17L23D6RBM5 183 aa11.32□□□□□ -0.6
RABGGTA-201ENST00000216840 S100A7L2Q5SY68 101 aa11.31□□□□□ -0.6
RABGGTA-201ENST00000216840 TEX49A0A1B0GTD5 131 aa11.31□□□□□ -0.6
RABGGTA-201ENST00000216840 RPL18AQ02543 176 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-201ENST00000216840 UBE2DNLQ8IWF7 75 aa11.3□□□□□ -0.6
RABGGTA-201ENST00000216840 KRTAP1-5Q9BYS1 174 aa11.3□□□□□ -0.6
RABGGTA-201ENST00000216840 IGLV6-57P01721 117 aa11.29□□□□□ -0.6
RABGGTA-201ENST00000216840 SLPIP03973 132 aa11.29□□□□□ -0.6
RABGGTA-201ENST00000216840 BAALC-AS2P0C853 105 aa11.29□□□□□ -0.6
RABGGTA-201ENST00000216840 Q6ZRP5 223 aa11.29□□□□□ -0.6
RABGGTA-201ENST00000216840 GAGE2EQ4V326 116 aa11.28□□□□□ -0.6
RABGGTA-201ENST00000216840 GAGE2DQ9UEU5 116 aa11.28□□□□□ -0.6
RABGGTA-201ENST00000216840 CSMD3Q7Z407 3707 aa11.28□□□□□ -0.6
RABGGTA-201ENST00000216840 NUPR2A6NF83 97 aa11.28□□□□□ -0.6
RABGGTA-201ENST00000216840 VPREB1P12018 145 aa11.28□□□□□ -0.6
RABGGTA-201ENST00000216840 PRKDCP78527 4128 aaKnown RBP11.27□□□□□ -0.6
RABGGTA-201ENST00000216840 LYSTQ99698 3801 aa11.27□□□□□ -0.6
RABGGTA-201ENST00000216840 LECT2O14960 151 aa11.27□□□□□ -0.61
RABGGTA-201ENST00000216840 DNHD1Q96M86 4753 aa11.26□□□□□ -0.61
RABGGTA-201ENST00000216840 DNAL4O96015 105 aa11.26□□□□□ -0.61
RABGGTA-201ENST00000216840 C6orf99Q4VX62 202 aa11.26□□□□□ -0.61
RABGGTA-201ENST00000216840 C22orf24Q9Y442 160 aa11.26□□□□□ -0.61
RABGGTA-201ENST00000216840 TRBV10-3A0A0K0K1G6 114 aa11.24□□□□□ -0.61
RABGGTA-201ENST00000216840 TLX1NBP0CAT3 122 aa11.24□□□□□ -0.61
RABGGTA-201ENST00000216840 C9orf129Q5T035 196 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-201ENST00000216840 DNAH7Q8WXX0 4024 aa11.23□□□□□ -0.61
RABGGTA-201ENST00000216840 PLECQ15149 4684 aaKnown RBP11.23□□□□□ -0.61
RABGGTA-201ENST00000216840 A0A1B0GX51 115 aa11.22□□□□□ -0.61
RABGGTA-201ENST00000216840 M0R378 163 aa11.21□□□□□ -0.61
RABGGTA-201ENST00000216840 LINC00167Q96N53 147 aa11.21□□□□□ -0.61
RABGGTA-201ENST00000216840 Q8N814 137 aa11.21□□□□□ -0.62
RABGGTA-201ENST00000216840 CDIP1Q9H305 208 aa11.21□□□□□ -0.62
RABGGTA-201ENST00000216840 MEGF8Q7Z7M0 2845 aa11.21□□□□□ -0.62
RABGGTA-201ENST00000216840 TRAV23DV6A0A075B6W5 121 aa11.2□□□□□ -0.62
RABGGTA-201ENST00000216840 LINC00575Q6W349 94 aa11.18□□□□□ -0.62
RABGGTA-201ENST00000216840 ORMDL1Q9P0S3 153 aa11.17□□□□□ -0.62
RABGGTA-201ENST00000216840 PSCAO43653 123 aa11.16□□□□□ -0.62
RABGGTA-201ENST00000216840 SERTAD4-AS1Q5TG53 156 aa11.16□□□□□ -0.62
RABGGTA-201ENST00000216840 DNAH10Q8IVF4 4471 aa11.16□□□□□ -0.62
RABGGTA-201ENST00000216840 TENM2Q9NT68 2774 aa11.16□□□□□ -0.62
RABGGTA-201ENST00000216840 ZNF73O43830 326 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-201ENST00000216840 DIRC1Q969H9 104 aa11.16□□□□□ -0.62
RABGGTA-201ENST00000216840 STARD9Q9P2P6 4700 aa11.15□□□□□ -0.62
RABGGTA-201ENST00000216840 PLA2G2DQ9UNK4 145 aa11.15□□□□□ -0.62
RABGGTA-201ENST00000216840 NBDYA0A0U1RRE5 68 aa11.15□□□□□ -0.63
RABGGTA-201ENST00000216840 SIGMAR1Q99720 223 aa11.15□□□□□ -0.63
RABGGTA-201ENST00000216840 SNCGO76070 127 aa11.13□□□□□ -0.63
RABGGTA-201ENST00000216840 TTC32Q5I0X7 151 aa11.13□□□□□ -0.63
RABGGTA-201ENST00000216840 NKAPP1Q8N9T2 125 aa11.13□□□□□ -0.63
RABGGTA-201ENST00000216840 LOC107984640A0A0U1RRK4 108 aa11.13□□□□□ -0.63
RABGGTA-201ENST00000216840 hADV29S1A0JD25 119 aa11.13□□□□□ -0.63
RABGGTA-201ENST00000216840 GAGE2BQ13066 116 aa11.13□□□□□ -0.63
RABGGTA-201ENST00000216840 TRBV7-6A0A0J9YX20 115 aa11.12□□□□□ -0.63
RABGGTA-201ENST00000216840 C7orf33Q8WU49 177 aa11.12□□□□□ -0.63
RABGGTA-201ENST00000216840 FAM168BA1KXE4 195 aa11.11□□□□□ -0.63
RABGGTA-201ENST00000216840 COX7BP24311 80 aa11.11□□□□□ -0.63
RABGGTA-201ENST00000216840 CNBPP62633 177 aaKnown RBP11.11□□□□□ -0.63
RABGGTA-201ENST00000216840 OBSCN-AS1Q96MR7 158 aa11.11□□□□□ -0.63
RABGGTA-201ENST00000216840 IGLV5-37A0A075B6J1 123 aa11.1□□□□□ -0.63
RABGGTA-201ENST00000216840 INAFM2P0DMQ5 153 aa11.1□□□□□ -0.63
RABGGTA-201ENST00000216840 ELOF1P60002 83 aaKnown RBP11.1□□□□□ -0.63
RABGGTA-201ENST00000216840 FAM240AA0A1B0GVK7 77 aa11.1□□□□□ -0.63
RABGGTA-201ENST00000216840 VPS13DQ5THJ4 4388 aa11.09□□□□□ -0.63
RABGGTA-201ENST00000216840 KRTAP7-1Q8IUC3 87 aa11.09□□□□□ -0.63
RABGGTA-201ENST00000216840 TMEM256-PLSCR3K7ERE1 68 aa11.08□□□□□ -0.63
RABGGTA-201ENST00000216840 XGP55808 180 aa11.08□□□□□ -0.63
RABGGTA-201ENST00000216840 C14orf177Q52M58 125 aa11.08□□□□□ -0.64
RABGGTA-201ENST00000216840 KCNQ1DNQ9H478 68 aa11.08□□□□□ -0.64
RABGGTA-201ENST00000216840 SVIPQ8NHG7 77 aa11.07□□□□□ -0.64
RABGGTA-201ENST00000216840 Q6ZRN7 208 aaPredicted RBP11.07□□□□□ -0.64
RABGGTA-201ENST00000216840 LRCOL1A6NCL2 159 aa11.06□□□□□ -0.64
RABGGTA-201ENST00000216840 MT-ATP8P03928 68 aa11.06□□□□□ -0.64
RABGGTA-201ENST00000216840 LINC00528Q8N1L1 170 aa11.05□□□□□ -0.64
RABGGTA-201ENST00000216840 C14orf132Q9NPU4 83 aa11.05□□□□□ -0.64
RABGGTA-201ENST00000216840 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.05□□□□□ -0.64
RABGGTA-201ENST00000216840 Q6ZQY7 126 aa11.05□□□□□ -0.64
RABGGTA-201ENST00000216840 FAM19A5Q7Z5A7 132 aaPredicted RBP11.04□□□□□ -0.64
RABGGTA-201ENST00000216840 ACYP1P07311 99 aa11.04□□□□□ -0.64
RABGGTA-201ENST00000216840 IGLV1-50A0A075B6I6 118 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms