RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 SPATA3Q8NHX4 192 aa10.33□□□□□ -0.76
SPTLC2-201ENST00000216484 IGLV1-40P01703 118 aa10.33□□□□□ -0.76
SPTLC2-201ENST00000216484 LINC01600Q96MT4 127 aa10.33□□□□□ -0.76
SPTLC2-201ENST00000216484 A0A1W2PNU3 283 aaPredicted RBP10.32□□□□□ -0.76
SPTLC2-201ENST00000216484 USP24Q9UPU5 2620 aa10.32□□□□□ -0.76
SPTLC2-201ENST00000216484 A0A1B0GUV1 79 aa10.32□□□□□ -0.76
SPTLC2-201ENST00000216484 AMELXQ99217 191 aa10.32□□□□□ -0.76
SPTLC2-201ENST00000216484 SMR3AQ99954 134 aa10.31□□□□□ -0.76
SPTLC2-201ENST00000216484 CHTF8P0CG12 524 aa10.31□□□□□ -0.76
SPTLC2-201ENST00000216484 C11orf71Q6IPW1 123 aa10.31□□□□□ -0.76
SPTLC2-201ENST00000216484 LYPD5Q6UWN5 251 aa10.31□□□□□ -0.76
SPTLC2-201ENST00000216484 Q96NJ1 140 aa10.31□□□□□ -0.76
SPTLC2-201ENST00000216484 MTORP42345 2549 aa10.3□□□□□ -0.76
SPTLC2-201ENST00000216484 TYMSOSQ8TAI1 123 aa10.29□□□□□ -0.76
SPTLC2-201ENST00000216484 Q6ZSN1 163 aa10.27□□□□□ -0.76
SPTLC2-201ENST00000216484 CDIP1Q9H305 208 aa10.27□□□□□ -0.77
SPTLC2-201ENST00000216484 RPS28P62857 69 aaKnown RBP10.26□□□□□ -0.77
SPTLC2-201ENST00000216484 ODF3L2Q3SX64 289 aa10.26□□□□□ -0.77
SPTLC2-201ENST00000216484 RPL37AP61513 92 aaKnown RBP10.26□□□□□ -0.77
SPTLC2-201ENST00000216484 NCOR2Q9Y618 2525 aa10.26□□□□□ -0.77
SPTLC2-201ENST00000216484 LUZP6Q538Z0 58 aa10.24□□□□□ -0.77
SPTLC2-201ENST00000216484 IGF2RP11717 2491 aa10.24□□□□□ -0.77
SPTLC2-201ENST00000216484 C9orf129Q5T035 196 aaKnown RBP10.24□□□□□ -0.77
SPTLC2-201ENST00000216484 UQCR11O14957 56 aa10.24□□□□□ -0.77
SPTLC2-201ENST00000216484 FAM229AH3BQW9 127 aa10.24□□□□□ -0.77
SPTLC2-201ENST00000216484 TM2D3Q9BRN9 247 aa10.24□□□□□ -0.77
SPTLC2-201ENST00000216484 H3BPC8 53 aa10.23□□□□□ -0.77
SPTLC2-201ENST00000216484 LINC01561Q8N1V8 128 aa10.23□□□□□ -0.77
SPTLC2-201ENST00000216484 COX6B2Q6YFQ2 88 aa10.22□□□□□ -0.77
SPTLC2-201ENST00000216484 IGLV1-51P01701 117 aa10.22□□□□□ -0.77
SPTLC2-201ENST00000216484 LINC01554Q52M75 96 aa10.22□□□□□ -0.77
SPTLC2-201ENST00000216484 LINC00476Q8WZB0 136 aa10.21□□□□□ -0.77
SPTLC2-201ENST00000216484 EPM2AB3EWF7 344 aa10.2□□□□□ -0.78
SPTLC2-201ENST00000216484 URB1-AS1Q96HZ7 61 aa10.2□□□□□ -0.78
SPTLC2-201ENST00000216484 MIR22HGQ0VDD5 57 aa10.2□□□□□ -0.78
SPTLC2-201ENST00000216484 LINC00167Q96N53 147 aa10.2□□□□□ -0.78
SPTLC2-201ENST00000216484 COA5Q86WW8 74 aa10.18□□□□□ -0.78
SPTLC2-201ENST00000216484 C11orf72Q8NBR9 251 aa10.18□□□□□ -0.78
SPTLC2-201ENST00000216484 LINC00310P59036 64 aa10.17□□□□□ -0.78
SPTLC2-201ENST00000216484 FAM19A4Q96LR4 140 aa10.17□□□□□ -0.78
SPTLC2-201ENST00000216484 CRIP3Q6Q6R5 217 aa10.17□□□□□ -0.78
SPTLC2-201ENST00000216484 PHF5AQ7RTV0 110 aaKnown RBP10.17□□□□□ -0.78
SPTLC2-201ENST00000216484 Q6ZQT0 140 aa10.15□□□□□ -0.78
SPTLC2-201ENST00000216484 IGLV6-57P01721 117 aa10.14□□□□□ -0.79
SPTLC2-201ENST00000216484 Q8NBF4 154 aa10.14□□□□□ -0.79
SPTLC2-201ENST00000216484 A8MUN3 132 aa10.14□□□□□ -0.79
SPTLC2-201ENST00000216484 BCE1O60756 84 aa10.13□□□□□ -0.79
SPTLC2-201ENST00000216484 NHLRC4P0CG21 123 aaPredicted RBP10.13□□□□□ -0.79
SPTLC2-201ENST00000216484 CYP4F30PQ9H0H9 118 aa10.13□□□□□ -0.79
SPTLC2-201ENST00000216484 FHL3Q13643 280 aa10.13□□□□□ -0.79
SPTLC2-201ENST00000216484 CHD8Q9HCK8 2581 aa10.13□□□□□ -0.79
SPTLC2-201ENST00000216484 A0A1B0GW54 56 aa10.12□□□□□ -0.79
SPTLC2-201ENST00000216484 LOC101927531A0A1B0GV80 90 aa10.12□□□□□ -0.79
SPTLC2-201ENST00000216484 C16orf90A8MZG2 172 aa10.11□□□□□ -0.79
SPTLC2-201ENST00000216484 ELOF1P60002 83 aaKnown RBP10.11□□□□□ -0.79
SPTLC2-201ENST00000216484 TRBV7-4A0A0J9YYF1 115 aa10.1□□□□□ -0.79
SPTLC2-201ENST00000216484 KIF25-AS1Q9Y6Z4 181 aa10.1□□□□□ -0.79
SPTLC2-201ENST00000216484 AVPP01185 164 aa10.1□□□□□ -0.79
SPTLC2-201ENST00000216484 J3QL48 77 aa10.1□□□□□ -0.79
SPTLC2-201ENST00000216484 FAM218AQ96MZ4 157 aa10.09□□□□□ -0.79
SPTLC2-201ENST00000216484 Q6ZRP5 223 aa10.09□□□□□ -0.79
SPTLC2-201ENST00000216484 Q6ZRX8 168 aa10.09□□□□□ -0.79
SPTLC2-201ENST00000216484 A0A0D9SG42 100 aa10.08□□□□□ -0.8
SPTLC2-201ENST00000216484 LOC110117498A0A087WWA1 95 aa10.08□□□□□ -0.8
SPTLC2-201ENST00000216484 ERC2-IT1O76042 136 aa10.07□□□□□ -0.8
SPTLC2-201ENST00000216484 A8MWP4 228 aa10.07□□□□□ -0.8
SPTLC2-201ENST00000216484 CD164Q04900 197 aa10.07□□□□□ -0.8
SPTLC2-201ENST00000216484 ANKRD11Q6UB99 2663 aaPredicted RBP10.07□□□□□ -0.8
SPTLC2-201ENST00000216484 A0A096LNJ9 63 aa10.06□□□□□ -0.8
SPTLC2-201ENST00000216484 K7EQZ3 153 aa10.06□□□□□ -0.8
SPTLC2-201ENST00000216484 RTL8CO15255 209 aa10.06□□□□□ -0.8
SPTLC2-201ENST00000216484 KTN1-AS1Q86SY8 53 aa10.06□□□□□ -0.8
SPTLC2-201ENST00000216484 MUC22E2RYF6 1773 aaPredicted RBP10.06□□□□□ -0.8
SPTLC2-201ENST00000216484 ST20-AS1Q8NBB2 130 aa10.06□□□□□ -0.8
SPTLC2-201ENST00000216484 CDC42SE1Q9NRR8 79 aa10.06□□□□□ -0.8
SPTLC2-201ENST00000216484 MRPL34Q9BQ48 92 aaKnown RBP10.03□□□□□ -0.8
SPTLC2-201ENST00000216484 IGHV3OR16-9A0A0B4J2B5 98 aa10.02□□□□□ -0.81
SPTLC2-201ENST00000216484 C16orf95Q9H693 158 aa10.02□□□□□ -0.81
SPTLC2-201ENST00000216484 IGLV5-39A0A0G2JS06 123 aa10.01□□□□□ -0.81
SPTLC2-201ENST00000216484 C9orf92A6NGG3 77 aa10.01□□□□□ -0.81
SPTLC2-201ENST00000216484 FASNP49327 2511 aaKnown RBP10.01□□□□□ -0.81
SPTLC2-201ENST00000216484 USP9YO00507 2555 aaPredicted RBP10.01□□□□□ -0.81
SPTLC2-201ENST00000216484 CSNK1G2-AS1Q8NCQ2 148 aa10.01□□□□□ -0.81
SPTLC2-201ENST00000216484 GOLGB1Q14789 3259 aaKnown RBP10□□□□□ -0.81
SPTLC2-201ENST00000216484 SMCPP49901 116 aaPredicted RBP10□□□□□ -0.81
SPTLC2-201ENST00000216484 CDSNQ15517 529 aa10□□□□□ -0.81
SPTLC2-201ENST00000216484 OBSCN-AS1Q96MR7 158 aa9.99□□□□□ -0.81
SPTLC2-201ENST00000216484 LCA10Q71F78 164 aa9.99□□□□□ -0.81
SPTLC2-201ENST00000216484 COX8CQ7Z4L0 72 aa9.97□□□□□ -0.81
SPTLC2-201ENST00000216484 PRO3102Q9H379 93 aa9.97□□□□□ -0.81
SPTLC2-201ENST00000216484 DSCR10P59022 87 aa9.97□□□□□ -0.81
SPTLC2-201ENST00000216484 LINC00315P59091 139 aa9.97□□□□□ -0.81
SPTLC2-201ENST00000216484 FAM168BA1KXE4 195 aa9.96□□□□□ -0.82
SPTLC2-201ENST00000216484 KRTAP10-9P60411 292 aa9.94□□□□□ -0.82
SPTLC2-201ENST00000216484 RBM12B-AS1Q9P1G2 102 aa9.93□□□□□ -0.82
SPTLC2-201ENST00000216484 IGLV5-37A0A075B6J1 123 aa9.93□□□□□ -0.82
SPTLC2-201ENST00000216484 LINC01546A6NGU7 62 aa9.92□□□□□ -0.82
SPTLC2-201ENST00000216484 LINC00483Q53H64 154 aa9.9□□□□□ -0.82
SPTLC2-201ENST00000216484 ZNF575Q86XF7 245 aa9.9□□□□□ -0.82
SPTLC2-201ENST00000216484 LINC00336Q6ZUF6 198 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms