RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 Q9HAA7 133 aa9.47□□□□□ -0.89
RTFDC1-201ENST00000023939 DNAH9Q9NYC9 4486 aa9.47□□□□□ -0.89
RTFDC1-201ENST00000023939 H0YGX0 51 aa9.46□□□□□ -0.89
RTFDC1-201ENST00000023939 J3QR89 54 aa9.46□□□□□ -0.89
RTFDC1-201ENST00000023939 CARD19Q96LW7 228 aa9.46□□□□□ -0.89
RTFDC1-201ENST00000023939 Q6ZRU5 148 aa9.45□□□□□ -0.9
RTFDC1-201ENST00000023939 OR13C6PQ8NH95 151 aa9.45□□□□□ -0.9
RTFDC1-201ENST00000023939 TMEM126AQ9H061 195 aa9.45□□□□□ -0.9
RTFDC1-201ENST00000023939 Q8NDZ9 215 aa9.45□□□□□ -0.9
RTFDC1-201ENST00000023939 PPDPFLQ8WWR9 84 aa9.45□□□□□ -0.9
RTFDC1-201ENST00000023939 NDUFC2-KCTD14E9PQ53 114 aa9.43□□□□□ -0.9
RTFDC1-201ENST00000023939 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
RTFDC1-201ENST00000023939 SYCNQ0VAF6 134 aa9.43□□□□□ -0.9
RTFDC1-201ENST00000023939 RNF151Q2KHN1 245 aa9.43□□□□□ -0.9
RTFDC1-201ENST00000023939 NUPR2A6NF83 97 aa9.42□□□□□ -0.9
RTFDC1-201ENST00000023939 FAM218AQ96MZ4 157 aa9.42□□□□□ -0.9
RTFDC1-201ENST00000023939 USP17L23D6RBM5 183 aa9.4□□□□□ -0.9
RTFDC1-201ENST00000023939 NCR3O14931 201 aa9.39□□□□□ -0.91
RTFDC1-201ENST00000023939 IGLV6-57P01721 117 aa9.39□□□□□ -0.91
RTFDC1-201ENST00000023939 TLX1NBP0CAT3 122 aa9.39□□□□□ -0.91
RTFDC1-201ENST00000023939 STAB2Q8WWQ8 2551 aa9.39□□□□□ -0.91
RTFDC1-201ENST00000023939 A0A1B0GX51 115 aa9.38□□□□□ -0.91
RTFDC1-201ENST00000023939 S100A7L2Q5SY68 101 aa9.38□□□□□ -0.91
RTFDC1-201ENST00000023939 CASC10Q5T4H9 136 aa9.38□□□□□ -0.91
RTFDC1-201ENST00000023939 UBE2DNLQ8IWF7 75 aa9.38□□□□□ -0.91
RTFDC1-201ENST00000023939 VPS25Q9BRG1 176 aa9.38□□□□□ -0.91
RTFDC1-201ENST00000023939 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
RTFDC1-201ENST00000023939 VPREB1P12018 145 aa9.37□□□□□ -0.91
RTFDC1-201ENST00000023939 KRTAP1-5Q9BYS1 174 aa9.37□□□□□ -0.91
RTFDC1-201ENST00000023939 A0A087WYN8 130 aa9.36□□□□□ -0.91
RTFDC1-201ENST00000023939 SLPIP03973 132 aa9.36□□□□□ -0.91
RTFDC1-201ENST00000023939 RPL18AQ02543 176 aaKnown RBP9.36□□□□□ -0.91
RTFDC1-201ENST00000023939 Q6ZRP5 223 aa9.36□□□□□ -0.91
RTFDC1-201ENST00000023939 BAALC-AS2P0C853 105 aa9.35□□□□□ -0.91
RTFDC1-201ENST00000023939 LINC00167Q96N53 147 aa9.34□□□□□ -0.91
RTFDC1-201ENST00000023939 M0R378 163 aa9.34□□□□□ -0.92
RTFDC1-201ENST00000023939 DNAL4O96015 105 aa9.34□□□□□ -0.92
RTFDC1-201ENST00000023939 DYNC2H1Q8NCM8 4307 aaKnown RBP9.33□□□□□ -0.92
RTFDC1-201ENST00000023939 TEX49A0A1B0GTD5 131 aa9.33□□□□□ -0.92
RTFDC1-201ENST00000023939 GAGE2EQ4V326 116 aa9.33□□□□□ -0.92
RTFDC1-201ENST00000023939 C6orf99Q4VX62 202 aa9.33□□□□□ -0.92
RTFDC1-201ENST00000023939 GAGE2DQ9UEU5 116 aa9.33□□□□□ -0.92
RTFDC1-201ENST00000023939 PLA2G2DQ9UNK4 145 aa9.33□□□□□ -0.92
RTFDC1-201ENST00000023939 COL7A1Q02388 2944 aa9.32□□□□□ -0.92
RTFDC1-201ENST00000023939 TRBV10-3A0A0K0K1G6 114 aa9.32□□□□□ -0.92
RTFDC1-201ENST00000023939 LECT2O14960 151 aa9.32□□□□□ -0.92
RTFDC1-201ENST00000023939 TTC32Q5I0X7 151 aa9.32□□□□□ -0.92
RTFDC1-201ENST00000023939 C9orf129Q5T035 196 aaKnown RBP9.32□□□□□ -0.92
RTFDC1-201ENST00000023939 C22orf24Q9Y442 160 aa9.32□□□□□ -0.92
RTFDC1-201ENST00000023939 DNAH1Q9P2D7 4330 aa9.32□□□□□ -0.92
RTFDC1-201ENST00000023939 TRAV23DV6A0A075B6W5 121 aa9.3□□□□□ -0.92
RTFDC1-201ENST00000023939 TRBV7-6A0A0J9YX20 115 aa9.3□□□□□ -0.92
RTFDC1-201ENST00000023939 Q8N814 137 aa9.3□□□□□ -0.92
RTFDC1-201ENST00000023939 SNCGO76070 127 aa9.29□□□□□ -0.92
RTFDC1-201ENST00000023939 LINC00575Q6W349 94 aa9.29□□□□□ -0.92
RTFDC1-201ENST00000023939 IGLV5-37A0A075B6J1 123 aa9.28□□□□□ -0.92
RTFDC1-201ENST00000023939 NBDYA0A0U1RRE5 68 aa9.28□□□□□ -0.92
RTFDC1-201ENST00000023939 CNBPP62633 177 aaKnown RBP9.28□□□□□ -0.92
RTFDC1-201ENST00000023939 DIRC1Q969H9 104 aa9.28□□□□□ -0.92
RTFDC1-201ENST00000023939 ORMDL1Q9P0S3 153 aa9.28□□□□□ -0.92
RTFDC1-201ENST00000023939 LOC107984640A0A0U1RRK4 108 aa9.27□□□□□ -0.93
RTFDC1-201ENST00000023939 ZNF73O43830 326 aaPredicted RBP9.27□□□□□ -0.93
RTFDC1-201ENST00000023939 PCP4P48539 62 aa9.27□□□□□ -0.93
RTFDC1-201ENST00000023939 C14orf177Q52M58 125 aa9.27□□□□□ -0.93
RTFDC1-201ENST00000023939 MEGF8Q7Z7M0 2845 aa9.26□□□□□ -0.93
RTFDC1-201ENST00000023939 PSCAO43653 123 aa9.26□□□□□ -0.93
RTFDC1-201ENST00000023939 CDIP1Q9H305 208 aa9.26□□□□□ -0.93
RTFDC1-201ENST00000023939 FAM240AA0A1B0GVK7 77 aa9.25□□□□□ -0.93
RTFDC1-201ENST00000023939 OBSCN-AS1Q96MR7 158 aa9.25□□□□□ -0.93
RTFDC1-201ENST00000023939 SERTAD4-AS1Q5TG53 156 aa9.25□□□□□ -0.93
RTFDC1-201ENST00000023939 hADV29S1A0JD25 119 aa9.24□□□□□ -0.93
RTFDC1-201ENST00000023939 INAFM2P0DMQ5 153 aa9.24□□□□□ -0.93
RTFDC1-201ENST00000023939 ELOF1P60002 83 aaKnown RBP9.24□□□□□ -0.93
RTFDC1-201ENST00000023939 NKAPP1Q8N9T2 125 aa9.24□□□□□ -0.93
RTFDC1-201ENST00000023939 KCNQ1DNQ9H478 68 aa9.23□□□□□ -0.93
RTFDC1-201ENST00000023939 COX7BP24311 80 aa9.22□□□□□ -0.93
RTFDC1-201ENST00000023939 Q6ZRN7 208 aaPredicted RBP9.22□□□□□ -0.93
RTFDC1-201ENST00000023939 C7orf33Q8WU49 177 aa9.22□□□□□ -0.93
RTFDC1-201ENST00000023939 H3BQ85 93 aa9.22□□□□□ -0.93
RTFDC1-201ENST00000023939 TMEM256-PLSCR3K7ERE1 68 aa9.22□□□□□ -0.93
RTFDC1-201ENST00000023939 GAGE2BQ13066 116 aa9.22□□□□□ -0.93
RTFDC1-201ENST00000023939 SIGMAR1Q99720 223 aa9.22□□□□□ -0.93
RTFDC1-201ENST00000023939 LRCOL1A6NCL2 159 aa9.21□□□□□ -0.94
RTFDC1-201ENST00000023939 PRKDCP78527 4128 aaKnown RBP9.2□□□□□ -0.94
RTFDC1-201ENST00000023939 ACYP1P07311 99 aa9.2□□□□□ -0.94
RTFDC1-201ENST00000023939 KRTAP7-1Q8IUC3 87 aa9.19□□□□□ -0.94
RTFDC1-201ENST00000023939 C16orf90A8MZG2 172 aa9.19□□□□□ -0.94
RTFDC1-201ENST00000023939 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.19□□□□□ -0.94
RTFDC1-201ENST00000023939 LINC00528Q8N1L1 170 aa9.19□□□□□ -0.94
RTFDC1-201ENST00000023939 IGLV1-50A0A075B6I6 118 aa9.17□□□□□ -0.94
RTFDC1-201ENST00000023939 FAM168BA1KXE4 195 aa9.17□□□□□ -0.94
RTFDC1-201ENST00000023939 JMJD7-PLA2G4BH0Y9G9 81 aa9.17□□□□□ -0.94
RTFDC1-201ENST00000023939 PKIGQ9Y2B9 76 aa9.17□□□□□ -0.94
RTFDC1-201ENST00000023939 PRYO14603 147 aa9.17□□□□□ -0.94
RTFDC1-201ENST00000023939 GHRHP01286 108 aa9.17□□□□□ -0.94
RTFDC1-201ENST00000023939 PLECQ15149 4684 aaKnown RBP9.16□□□□□ -0.94
RTFDC1-201ENST00000023939 SPRR1AP35321 89 aa9.16□□□□□ -0.94
RTFDC1-201ENST00000023939 C21orf62-AS1Q17RA5 79 aa9.16□□□□□ -0.94
RTFDC1-201ENST00000023939 Q6ZR54 194 aa9.16□□□□□ -0.94
RTFDC1-201ENST00000023939 A0A096LNI7 61 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms