RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 IGKCP01834 107 aa11.5□□□□□ -0.57
TRAPPC6A-201ENST00000006275 S100A1P23297 94 aa11.5□□□□□ -0.57
TRAPPC6A-201ENST00000006275 LINC00158P58513 81 aa11.5□□□□□ -0.57
TRAPPC6A-201ENST00000006275 SND1-IT1Q9HBX3 110 aa11.5□□□□□ -0.57
TRAPPC6A-201ENST00000006275 NKAPP1Q8N9T2 125 aa11.49□□□□□ -0.57
TRAPPC6A-201ENST00000006275 IGLV5-37A0A075B6J1 123 aa11.48□□□□□ -0.57
TRAPPC6A-201ENST00000006275 A0A0U1RRA0 63 aa11.48□□□□□ -0.57
TRAPPC6A-201ENST00000006275 LEPROTO15243 131 aa11.48□□□□□ -0.57
TRAPPC6A-201ENST00000006275 HERVK_113P61574 105 aa11.48□□□□□ -0.57
TRAPPC6A-201ENST00000006275 NDUFA12Q9UI09 145 aa11.48□□□□□ -0.57
TRAPPC6A-201ENST00000006275 HERV-K104P63124 156 aa11.47□□□□□ -0.57
TRAPPC6A-201ENST00000006275 MEIG1Q5JSS6 88 aa11.47□□□□□ -0.57
TRAPPC6A-201ENST00000006275 PLEKHB2Q96CS7 222 aa11.47□□□□□ -0.57
TRAPPC6A-201ENST00000006275 LINC00167Q96N53 147 aa11.47□□□□□ -0.57
TRAPPC6A-201ENST00000006275 MYMXA0A1B0GTQ4 84 aa11.46□□□□□ -0.57
TRAPPC6A-201ENST00000006275 GAGE10A6NGK3 116 aa11.46□□□□□ -0.57
TRAPPC6A-201ENST00000006275 SYS1-DBNDD2H3BUS1 97 aa11.46□□□□□ -0.57
TRAPPC6A-201ENST00000006275 ATP6V1G1O75348 118 aa11.46□□□□□ -0.57
TRAPPC6A-201ENST00000006275 COA6Q5JTJ3 125 aaKnown RBP11.46□□□□□ -0.57
TRAPPC6A-201ENST00000006275 RPL37AP8A6NKH3 93 aa11.45□□□□□ -0.58
TRAPPC6A-201ENST00000006275 SMIM13P0DJ93 91 aa11.45□□□□□ -0.58
TRAPPC6A-201ENST00000006275 DIRC1Q969H9 104 aa11.45□□□□□ -0.58
TRAPPC6A-201ENST00000006275 A0A0U1RQV1 116 aa11.44□□□□□ -0.58
TRAPPC6A-201ENST00000006275 VPREB1P12018 145 aa11.44□□□□□ -0.58
TRAPPC6A-201ENST00000006275 TSPEAR-AS2P59090 65 aa11.44□□□□□ -0.58
TRAPPC6A-201ENST00000006275 RPL24P83731 157 aaKnown RBP11.44□□□□□ -0.58
TRAPPC6A-201ENST00000006275 LINC00587B1AMM8 73 aa11.43□□□□□ -0.58
TRAPPC6A-201ENST00000006275 J3QQQ9 107 aa11.43□□□□□ -0.58
TRAPPC6A-201ENST00000006275 PET117Q6UWS5 81 aa11.42□□□□□ -0.58
TRAPPC6A-201ENST00000006275 H0Y9J4 135 aa11.41□□□□□ -0.58
TRAPPC6A-201ENST00000006275 LGALS3P17931 250 aaKnown RBP11.41□□□□□ -0.58
TRAPPC6A-201ENST00000006275 ZNF861PO60384 105 aa11.4□□□□□ -0.58
TRAPPC6A-201ENST00000006275 LINC01545Q5VT33 79 aa11.4□□□□□ -0.58
TRAPPC6A-201ENST00000006275 MIR7-3HGQ8N6C7 128 aa11.4□□□□□ -0.58
TRAPPC6A-201ENST00000006275 IGKV2-28A0A075B6P5 120 aa11.39□□□□□ -0.59
TRAPPC6A-201ENST00000006275 BCE1O60756 84 aa11.39□□□□□ -0.59
TRAPPC6A-201ENST00000006275 IGKV2D-28P01615 120 aa11.39□□□□□ -0.59
TRAPPC6A-201ENST00000006275 C3orf79P0CE67 100 aa11.39□□□□□ -0.59
TRAPPC6A-201ENST00000006275 NMUP48645 174 aa11.39□□□□□ -0.59
TRAPPC6A-201ENST00000006275 PRR26Q8N8Z3 221 aa11.39□□□□□ -0.59
TRAPPC6A-201ENST00000006275 Q8NDZ9 215 aa11.39□□□□□ -0.59
TRAPPC6A-201ENST00000006275 MUC2Q02817 5179 aa11.39□□□□□ -0.59
TRAPPC6A-201ENST00000006275 KRTAP9-6A0A140TA67 174 aa11.38□□□□□ -0.59
TRAPPC6A-201ENST00000006275 E9PLD3 99 aa11.38□□□□□ -0.59
TRAPPC6A-201ENST00000006275 KRTDAPP60985 99 aa11.37□□□□□ -0.59
TRAPPC6A-201ENST00000006275 IGLV1-50A0A075B6I6 118 aa11.36□□□□□ -0.59
TRAPPC6A-201ENST00000006275 RPL28P46779 137 aaKnown RBP11.35□□□□□ -0.59
TRAPPC6A-201ENST00000006275 PRR4Q16378 134 aa11.35□□□□□ -0.59
TRAPPC6A-201ENST00000006275 BOD1L2Q8IYS8 172 aa11.35□□□□□ -0.59
TRAPPC6A-201ENST00000006275 M0R378 163 aa11.33□□□□□ -0.6
TRAPPC6A-201ENST00000006275 UBE2AP49459 152 aa11.33□□□□□ -0.6
TRAPPC6A-201ENST00000006275 DAND5Q8N907 189 aa11.33□□□□□ -0.6
TRAPPC6A-201ENST00000006275 C20orf202A1L168 122 aa11.31□□□□□ -0.6
TRAPPC6A-201ENST00000006275 TMEM126AQ9H061 195 aa11.31□□□□□ -0.6
TRAPPC6A-201ENST00000006275 A0A0J9YXY3 114 aa11.3□□□□□ -0.6
TRAPPC6A-201ENST00000006275 TMEM238C9JI98 176 aa11.3□□□□□ -0.6
TRAPPC6A-201ENST00000006275 NCR3O14931 201 aa11.3□□□□□ -0.6
TRAPPC6A-201ENST00000006275 KRTAP1-4P0C5Y4 121 aa11.3□□□□□ -0.6
TRAPPC6A-201ENST00000006275 FAM19A1Q7Z5A9 133 aa11.29□□□□□ -0.6
TRAPPC6A-201ENST00000006275 MIEN1Q9BRT3 115 aa11.29□□□□□ -0.6
TRAPPC6A-201ENST00000006275 IGKV2D-26A0A0A0MRZ7 120 aa11.28□□□□□ -0.6
TRAPPC6A-201ENST00000006275 LOC107984156A0A0G2JMH3 177 aa11.28□□□□□ -0.6
TRAPPC6A-201ENST00000006275 ARL17AQ8IVW1 177 aa11.28□□□□□ -0.6
TRAPPC6A-201ENST00000006275 S100A2P29034 98 aa11.27□□□□□ -0.61
TRAPPC6A-201ENST00000006275 KRTAP13-1Q8IUC0 172 aa11.27□□□□□ -0.61
TRAPPC6A-201ENST00000006275 FAT4Q6V0I7 4981 aa11.27□□□□□ -0.61
TRAPPC6A-201ENST00000006275 S100A6P06703 90 aa11.26□□□□□ -0.61
TRAPPC6A-201ENST00000006275 PRLHP81277 87 aa11.26□□□□□ -0.61
TRAPPC6A-201ENST00000006275 HIST3H2BBQ8N257 126 aa11.26□□□□□ -0.61
TRAPPC6A-201ENST00000006275 ZNF815PA8K554 130 aa11.25□□□□□ -0.61
TRAPPC6A-201ENST00000006275 LCE2AQ5TA79 106 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC6A-201ENST00000006275 AKR1D1P51857 326 aa11.24□□□□□ -0.61
TRAPPC6A-201ENST00000006275 NPC2P61916 151 aa11.24□□□□□ -0.61
TRAPPC6A-201ENST00000006275 ADAMTSL4-AS1Q5T5F5 129 aa11.24□□□□□ -0.61
TRAPPC6A-201ENST00000006275 PRYO14603 147 aa11.23□□□□□ -0.61
TRAPPC6A-201ENST00000006275 ATOH7Q8N100 152 aa11.23□□□□□ -0.61
TRAPPC6A-201ENST00000006275 TTTY13Q9BZ97 58 aa11.23□□□□□ -0.61
TRAPPC6A-201ENST00000006275 TRBV10-3A0A0K0K1G6 114 aa11.22□□□□□ -0.61
TRAPPC6A-201ENST00000006275 HIST1H2BLQ99880 126 aa11.22□□□□□ -0.61
TRAPPC6A-201ENST00000006275 SPANXB1Q9NS25 103 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC6A-201ENST00000006275 TRBV10-2A0A0K0K1G8 114 aa11.21□□□□□ -0.61
TRAPPC6A-201ENST00000006275 TIMM17BO60830 172 aa11.21□□□□□ -0.61
TRAPPC6A-201ENST00000006275 NDUFC2O95298 119 aa11.21□□□□□ -0.61
TRAPPC6A-201ENST00000006275 RPL13AP40429 203 aaKnown RBP11.21□□□□□ -0.61
TRAPPC6A-201ENST00000006275 S100A12P80511 92 aa11.21□□□□□ -0.61
TRAPPC6A-201ENST00000006275 ANKRD39Q53RE8 183 aa11.21□□□□□ -0.61
TRAPPC6A-201ENST00000006275 SOSTDC1Q6X4U4 206 aa11.21□□□□□ -0.61
TRAPPC6A-201ENST00000006275 KCNQ1DNQ9H478 68 aa11.21□□□□□ -0.61
TRAPPC6A-201ENST00000006275 DDTP30046 118 aa11.19□□□□□ -0.62
TRAPPC6A-201ENST00000006275 LITAFQ99732 161 aa11.19□□□□□ -0.62
TRAPPC6A-201ENST00000006275 EIF4EBP3O60516 100 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC6A-201ENST00000006275 SPRR1AP35321 89 aa11.17□□□□□ -0.62
TRAPPC6A-201ENST00000006275 SNRPEP62304 92 aaKnown RBP11.17□□□□□ -0.62
TRAPPC6A-201ENST00000006275 S100A7L2Q5SY68 101 aa11.17□□□□□ -0.62
TRAPPC6A-201ENST00000006275 LINC00337Q8N6G1 96 aa11.17□□□□□ -0.62
TRAPPC6A-201ENST00000006275 LINC00308Q8TCZ7 52 aa11.17□□□□□ -0.62
TRAPPC6A-201ENST00000006275 HIGD2AQ9BW72 106 aa11.17□□□□□ -0.62
TRAPPC6A-201ENST00000006275 ETDCA0A1B0GVM5 59 aa11.16□□□□□ -0.62
TRAPPC6A-201ENST00000006275 SCGB1D4Q6XE38 83 aa11.16□□□□□ -0.62
TRAPPC6A-201ENST00000006275 ANAPC11Q9NYG5 84 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms