RNA–Protein interactions for RNA: ENSMUST00000199079.1

Rpf1-203, Transcript of Ribosome production factor 1, mousemouse

TSL 1 (best) BASIC

Gene Rpf1, Length 1,978 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-203ENSMUST00000199079 Tmem89Q9DA04 169 aa13.45□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Tmub1Q9JMG3 245 aa13.45□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Gm3512L7N206 146 aa13.45□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Zcwpw2Q08EN7 125 aa13.45□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Olfr958Q8VEY3 312 aa13.45□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Ndufa2Q9CQ75 99 aa13.45□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Fam103a1Q9CQY2 119 aaKnown RBP13.45□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Ankrd11E9Q4F7 2643 aa13.44□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Gm26965M0QWH4 86 aa13.44□□□□□ -0.26
Rpf1-203ENSMUST00000199079 CampP51437 172 aa13.44□□□□□ -0.26
Rpf1-203ENSMUST00000199079 YrdcQ3U5F4 280 aa13.44□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Tmem129Q8K304 362 aa13.44□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Stxbp6Q8R3T5 210 aa13.44□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Dolpp1Q9JMF7 238 aa13.44□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Sptbn4E9PX29 2561 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Ighv1-81A0A075B5Y4 117 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Trav7-1A0A0G2JEV5 112 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Fgfbp1O70514 251 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 CebpdQ00322 268 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 V1rd19Q3KNP5 305 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Mex3bQ69Z36 601 aaKnown RBP13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 9230109A22RikQ8BHE6 111 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Tmem177Q8BPE4 311 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Gm26566Q8CAC1 153 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Ndfip1Q8R0W6 221 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Leprotl1Q9CQ74 131 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Chchd5Q9CQP3 110 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Cnih1O35372 144 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Icam2P35330 277 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Reg1P43137 165 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Rhbdd1Q8BHC7 315 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Insig2Q91WG1 225 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Rab1bQ9D1G1 201 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 F5O88783 2183 aa13.43□□□□□ -0.26
Rpf1-203ENSMUST00000199079 SetxA2AKX3 2646 aa13.42□□□□□ -0.26
Rpf1-203ENSMUST00000199079 CenpeQ6RT24 2474 aaKnown RBP13.42□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Amn1B8JKV0 258 aa13.42□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Gm15056F6ZR08 88 aa13.42□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Olfr1465Q7TQR2 307 aa13.42□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Olfr1256Q8VGP1 306 aa13.42□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Pla2g2eQ9QUL3 142 aa13.42□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Bhlha15Q9QYC3 197 aa13.42□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Plekhb2Q9QZC7 221 aa13.42□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Timm23Q9WTQ8 209 aa13.42□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Gm14214V9GX35 225 aa13.42□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Trav14-3A0A075B607 120 aa13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Trav6d-7A0A075B6B0 112 aa13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Ighv1-37A0A0A6YW32 117 aa13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Tmem29A2ANF5 204 aa13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Gm2174F6ZVF2 133 aa13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Onecut1O08755 465 aa13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 SeleQ00690 612 aa13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Spsb3Q571F5 354 aa13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Olfr433Q7TRV9 314 aa13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Olfr975Q8VG91 310 aa13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Abca7Q91V24 2159 aa13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 F2rl1P55086 399 aa13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Rbfox2Q8BP71 449 aaKnown RBP13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Ndufb3Q9CQZ6 104 aa13.41□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP13.4□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Zfp114B2RRA8 586 aa13.4□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Gm9920D3YVZ2 140 aa13.4□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Lcn2P11672 200 aa13.4□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Cd5P13379 494 aa13.4□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Igfbpl1Q80W15 270 aa13.4□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Rnf182Q8C432 247 aa13.4□□□□□ -0.26
Rpf1-203ENSMUST00000199079 EppinQ9DA01 134 aa13.4□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Zfp53Q9Z117 652 aa13.4□□□□□ -0.26
Rpf1-203ENSMUST00000199079 AcacbE9Q4Z2 2448 aa13.4□□□□□ -0.26
Rpf1-203ENSMUST00000199079 Trav9-1A0A075B601 112 aa13.4□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Trdv1A0A075B657 112 aa13.4□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Esp23A8R0V5 104 aa13.4□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Svs5P30933 122 aa13.4□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Shisal1Q0VBP7 198 aa13.4□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Bst1Q64277 311 aa13.4□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Ifi27Q8C6G0 260 aa13.4□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Ncor2Q9WU42 2472 aaKnown RBP13.39□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Ighv8-6A0A0A6YXA3 118 aa13.39□□□□□ -0.27
Rpf1-203ENSMUST00000199079 1810011H11RikE9PVZ2 95 aa13.39□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Gm9964E9Q9S5 144 aa13.39□□□□□ -0.27
Rpf1-203ENSMUST00000199079 P01725 110 aa13.39□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Pde6hP61249 83 aa13.39□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Msrb2Q78J03 175 aa13.39□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Crybb3Q9JJU9 211 aa13.39□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Usp24B1AY13 2617 aaKnown RBP13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Ighv1-69A0A0G2JFS5 117 aa13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 P01748 117 aa13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Sub1P11031 127 aaKnown RBP13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Ripply2Q2WG76 128 aa13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Megf10Q6DIB5 1147 aa13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Ccsmst1Q6RUT7 136 aa13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Plrg1Q922V4 513 aaKnown RBP13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Gng10Q9CXP8 68 aa13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Dopey1Q8BL99 2399 aa13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Trbv31A0A075B5J5 111 aa13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Ighv1-55A0A075B5W6 117 aa13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Olfr1192-ps1A0A1L1SRD7 309 aa13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 D930048N14RikA2AA67 225 aa13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 HrkP62816 92 aa13.38□□□□□ -0.27
Rpf1-203ENSMUST00000199079 Cend1Q9JKC6 149 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms