RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 C2orf82Q6UX34 121 aa11.46□□□□□ -0.57
PHGDH-230ENST00000641927 FRAS1Q86XX4 4008 aa11.46□□□□□ -0.57
PHGDH-230ENST00000641927 CAMK2N2Q96S95 79 aa11.46□□□□□ -0.58
PHGDH-230ENST00000641927 EREGO14944 169 aa11.45□□□□□ -0.58
PHGDH-230ENST00000641927 DDTP30046 118 aa11.45□□□□□ -0.58
PHGDH-230ENST00000641927 NTN5Q8WTR8 489 aaPredicted RBP11.45□□□□□ -0.58
PHGDH-230ENST00000641927 MIEN1Q9BRT3 115 aa11.45□□□□□ -0.58
PHGDH-230ENST00000641927 UQCR10Q9UDW1 63 aa11.45□□□□□ -0.58
PHGDH-230ENST00000641927 Q8N814 137 aa11.44□□□□□ -0.58
PHGDH-230ENST00000641927 C14orf144Q96I85 54 aa11.44□□□□□ -0.58
PHGDH-230ENST00000641927 TTTY13Q9BZ97 58 aa11.44□□□□□ -0.58
PHGDH-230ENST00000641927 NDUFA12Q9UI09 145 aa11.44□□□□□ -0.58
PHGDH-230ENST00000641927 NDUFA1O15239 70 aa11.43□□□□□ -0.58
PHGDH-230ENST00000641927 CXCL5P42830 114 aa11.43□□□□□ -0.58
PHGDH-230ENST00000641927 C2orf48Q96LS8 159 aa11.43□□□□□ -0.58
PHGDH-230ENST00000641927 UNQ6190/PRO20217Q6UXQ8 127 aa11.43□□□□□ -0.58
PHGDH-230ENST00000641927 PCP2Q8IVA1 136 aa11.43□□□□□ -0.58
PHGDH-230ENST00000641927 DNAH17Q9UFH2 4485 aa11.42□□□□□ -0.58
PHGDH-230ENST00000641927 ZNF815PA8K554 130 aa11.42□□□□□ -0.58
PHGDH-230ENST00000641927 SYCNQ0VAF6 134 aa11.42□□□□□ -0.58
PHGDH-230ENST00000641927 ZNF625Q96I27 306 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-230ENST00000641927 MYMXA0A1B0GTQ4 84 aa11.41□□□□□ -0.58
PHGDH-230ENST00000641927 COX8AP10176 69 aa11.41□□□□□ -0.58
PHGDH-230ENST00000641927 C10orf25Q5T742 122 aa11.41□□□□□ -0.58
PHGDH-230ENST00000641927 SLPIP03973 132 aa11.4□□□□□ -0.58
PHGDH-230ENST00000641927 SLC25A34Q6PIV7 304 aa11.4□□□□□ -0.58
PHGDH-230ENST00000641927 Q6ZRU5 148 aa11.4□□□□□ -0.58
PHGDH-230ENST00000641927 CARD19Q96LW7 228 aa11.4□□□□□ -0.58
PHGDH-230ENST00000641927 SFTA2Q6UW10 78 aa11.4□□□□□ -0.59
PHGDH-230ENST00000641927 LINC00336Q6ZUF6 198 aa11.4□□□□□ -0.59
PHGDH-230ENST00000641927 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-230ENST00000641927 F8WDY8 70 aa11.39□□□□□ -0.59
PHGDH-230ENST00000641927 FUSP35637 526 aaKnown RBP eCLIP11.37□□□□□ -0.59
PHGDH-230ENST00000641927 HERV-K104P63124 156 aa11.37□□□□□ -0.59
PHGDH-230ENST00000641927 C6orf48Q9UBA6 75 aa11.37□□□□□ -0.59
PHGDH-230ENST00000641927 DLEU1O43261 78 aa11.36□□□□□ -0.59
PHGDH-230ENST00000641927 CNBPP62633 177 aaKnown RBP11.36□□□□□ -0.59
PHGDH-230ENST00000641927 C9orf116Q5BN46 136 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-230ENST00000641927 MEIG1Q5JSS6 88 aa11.36□□□□□ -0.59
PHGDH-230ENST00000641927 SCGB1D4Q6XE38 83 aa11.36□□□□□ -0.59
PHGDH-230ENST00000641927 BOD1L2Q8IYS8 172 aa11.36□□□□□ -0.59
PHGDH-230ENST00000641927 TP73-AS1Q9UF72 201 aa11.36□□□□□ -0.59
PHGDH-230ENST00000641927 RYR3Q15413 4870 aa11.36□□□□□ -0.59
PHGDH-230ENST00000641927 TRBV30A0A0K0K1B3 111 aa11.36□□□□□ -0.59
PHGDH-230ENST00000641927 HNRNPA3P51991 378 aaKnown RBP11.36□□□□□ -0.59
PHGDH-230ENST00000641927 PFN2P35080 140 aa11.35□□□□□ -0.59
PHGDH-230ENST00000641927 FAT2Q9NYQ8 4349 aa11.35□□□□□ -0.59
PHGDH-230ENST00000641927 IGLV5-52A0A0A0MRZ9 124 aa11.34□□□□□ -0.59
PHGDH-230ENST00000641927 A0A0J9YXY3 114 aa11.34□□□□□ -0.59
PHGDH-230ENST00000641927 A0A0U1RRA0 63 aa11.34□□□□□ -0.59
PHGDH-230ENST00000641927 ERG28Q9UKR5 140 aa11.34□□□□□ -0.59
PHGDH-230ENST00000641927 SMIM13P0DJ93 91 aa11.32□□□□□ -0.6
PHGDH-230ENST00000641927 LINC00158P58513 81 aa11.32□□□□□ -0.6
PHGDH-230ENST00000641927 LINC01620Q4KN68 170 aa11.32□□□□□ -0.6
PHGDH-230ENST00000641927 LBHQ53QV2 105 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-230ENST00000641927 KRTAP10-2P60368 255 aa11.31□□□□□ -0.6
PHGDH-230ENST00000641927 CIRBPQ14011 172 aaKnown RBP11.31□□□□□ -0.6
PHGDH-230ENST00000641927 RNF151Q2KHN1 245 aa11.3□□□□□ -0.6
PHGDH-230ENST00000641927 C9orf163Q8N9P6 203 aa11.3□□□□□ -0.6
PHGDH-230ENST00000641927 RPL18AQ02543 176 aaKnown RBP11.29□□□□□ -0.6
PHGDH-230ENST00000641927 COX17Q14061 63 aa11.29□□□□□ -0.6
PHGDH-230ENST00000641927 C2orf91Q6ZV80 131 aa11.29□□□□□ -0.6
PHGDH-230ENST00000641927 PGPEP1Q9NXJ5 209 aa11.29□□□□□ -0.6
PHGDH-230ENST00000641927 NDUFC2-KCTD14E9PQ53 114 aa11.28□□□□□ -0.6
PHGDH-230ENST00000641927 DAND5Q8N907 189 aa11.28□□□□□ -0.6
PHGDH-230ENST00000641927 LOC107984640A0A0U1RRK4 108 aa11.27□□□□□ -0.6
PHGDH-230ENST00000641927 TMEM238C9JI98 176 aa11.27□□□□□ -0.61
PHGDH-230ENST00000641927 GAGE2EQ4V326 116 aa11.27□□□□□ -0.61
PHGDH-230ENST00000641927 MIR7-3HGQ8N6C7 128 aa11.27□□□□□ -0.61
PHGDH-230ENST00000641927 HIGD1BQ9P298 99 aa11.27□□□□□ -0.61
PHGDH-230ENST00000641927 GAGE2DQ9UEU5 116 aa11.27□□□□□ -0.61
PHGDH-230ENST00000641927 TIMM17BO60830 172 aa11.26□□□□□ -0.61
PHGDH-230ENST00000641927 GAGE2BQ13066 116 aa11.26□□□□□ -0.61
PHGDH-230ENST00000641927 ADAMTSL4-AS1Q5T5F5 129 aa11.26□□□□□ -0.61
PHGDH-230ENST00000641927 Q6ZRP5 223 aa11.26□□□□□ -0.61
PHGDH-230ENST00000641927 DNAH11Q96DT5 4516 aa11.26□□□□□ -0.61
PHGDH-230ENST00000641927 HECTD4Q9Y4D8 3996 aa11.25□□□□□ -0.61
PHGDH-230ENST00000641927 A0A1B0GV90 55 aa11.25□□□□□ -0.61
PHGDH-230ENST00000641927 PKD1P98161 4303 aa11.24□□□□□ -0.61
PHGDH-230ENST00000641927 TLX1NBP0CAT3 122 aa11.24□□□□□ -0.61
PHGDH-230ENST00000641927 LITAFQ99732 161 aa11.24□□□□□ -0.61
PHGDH-230ENST00000641927 PKIGQ9Y2B9 76 aa11.24□□□□□ -0.61
PHGDH-230ENST00000641927 IGKV2-24A0A0C4DH68 120 aa11.24□□□□□ -0.61
PHGDH-230ENST00000641927 A0A1B0GVY2 172 aa11.24□□□□□ -0.61
PHGDH-230ENST00000641927 M0R143 59 aa11.24□□□□□ -0.61
PHGDH-230ENST00000641927 NPC2P61916 151 aa11.24□□□□□ -0.61
PHGDH-230ENST00000641927 SRSF9Q13242 221 aaKnown RBP eCLIP11.24□□□□□ -0.61
PHGDH-230ENST00000641927 XAGE1AQ9HD64 81 aa11.24□□□□□ -0.61
PHGDH-230ENST00000641927 GCSHP23434 173 aa11.23□□□□□ -0.61
PHGDH-230ENST00000641927 SDIM1Q6ZPB5 146 aa11.23□□□□□ -0.61
PHGDH-230ENST00000641927 SND1-IT1Q9HBX3 110 aa11.22□□□□□ -0.61
PHGDH-230ENST00000641927 A0A096LNI7 61 aa11.21□□□□□ -0.61
PHGDH-230ENST00000641927 HIST1H4GQ99525 98 aa11.21□□□□□ -0.61
PHGDH-230ENST00000641927 SNHG12Q9BXW3 62 aa11.21□□□□□ -0.61
PHGDH-230ENST00000641927 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
PHGDH-230ENST00000641927 PTTG1IPP53801 180 aa11.2□□□□□ -0.62
PHGDH-230ENST00000641927 HSD52Q0P140 79 aa11.2□□□□□ -0.62
PHGDH-230ENST00000641927 SPANXDQ9BXN6 97 aa11.2□□□□□ -0.62
PHGDH-230ENST00000641927 SPANXCQ9NY87 97 aa11.2□□□□□ -0.62
PHGDH-230ENST00000641927 CHTF8P0CG12 524 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms