RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.43
PHGDH-219ENST00000641513 ANGP03950 147 aaKnown RBP6.09□□□□□ -1.43
PHGDH-219ENST00000641513 COX6CP09669 75 aa6.09□□□□□ -1.43
PHGDH-219ENST00000641513 SPINK8P0C7L1 97 aa6.09□□□□□ -1.43
PHGDH-219ENST00000641513 COX6A2Q02221 97 aa6.09□□□□□ -1.43
PHGDH-219ENST00000641513 SS18Q15532 418 aa6.09□□□□□ -1.43
PHGDH-219ENST00000641513 LCE2AQ5TA79 106 aaPredicted RBP6.09□□□□□ -1.43
PHGDH-219ENST00000641513 ZNF625Q96I27 306 aaPredicted RBP6.09□□□□□ -1.43
PHGDH-219ENST00000641513 SIGMAR1Q99720 223 aa6.09□□□□□ -1.43
PHGDH-219ENST00000641513 TENM3Q9P273 2699 aa6.08□□□□□ -1.44
PHGDH-219ENST00000641513 A0A1B0GUV1 79 aa6.08□□□□□ -1.44
PHGDH-219ENST00000641513 H3BT86 120 aa6.08□□□□□ -1.44
PHGDH-219ENST00000641513 SCGB1C2P0DMR2 95 aa6.08□□□□□ -1.44
PHGDH-219ENST00000641513 RPL13AP40429 203 aaKnown RBP6.08□□□□□ -1.44
PHGDH-219ENST00000641513 LINC00959A0A1B0GUT2 108 aa6.07□□□□□ -1.44
PHGDH-219ENST00000641513 SLC25A20O43772 301 aa6.07□□□□□ -1.44
PHGDH-219ENST00000641513 LINC01620Q4KN68 170 aa6.07□□□□□ -1.44
PHGDH-219ENST00000641513 ADAMTSL4-AS1Q5T5F5 129 aa6.07□□□□□ -1.44
PHGDH-219ENST00000641513 LINC01561Q8N1V8 128 aa6.07□□□□□ -1.44
PHGDH-219ENST00000641513 LINC00269Q8N2A0 174 aa6.07□□□□□ -1.44
PHGDH-219ENST00000641513 Q8N3U1 123 aa6.07□□□□□ -1.44
PHGDH-219ENST00000641513 C15orf53Q8NAA6 179 aa6.07□□□□□ -1.44
PHGDH-219ENST00000641513 TRBV10-2A0A0K0K1G8 114 aa6.06□□□□□ -1.44
PHGDH-219ENST00000641513 TRIAP1O43715 76 aa6.06□□□□□ -1.44
PHGDH-219ENST00000641513 NHLRC4P0CG21 123 aaPredicted RBP6.06□□□□□ -1.44
PHGDH-219ENST00000641513 Q1RN00 199 aa6.06□□□□□ -1.44
PHGDH-219ENST00000641513 ESRGQ1W209 222 aa6.06□□□□□ -1.44
PHGDH-219ENST00000641513 ANKRD29Q8N6D5 301 aa6.06□□□□□ -1.44
PHGDH-219ENST00000641513 LINC00308Q8TCZ7 52 aa6.06□□□□□ -1.44
PHGDH-219ENST00000641513 HUWE1Q7Z6Z7 4374 aaKnown RBP6.06□□□□□ -1.44
PHGDH-219ENST00000641513 MGAM2Q2M2H8 2515 aa6.05□□□□□ -1.44
PHGDH-219ENST00000641513 LST1O00453 97 aa6.05□□□□□ -1.44
PHGDH-219ENST00000641513 PRSS2P07478 247 aa6.05□□□□□ -1.44
PHGDH-219ENST00000641513 XCL1P47992 114 aa6.05□□□□□ -1.44
PHGDH-219ENST00000641513 REG3AQ06141 175 aa6.05□□□□□ -1.44
PHGDH-219ENST00000641513 C5orf38Q86SI9 138 aa6.05□□□□□ -1.44
PHGDH-219ENST00000641513 WFDC10BQ8IUB3 73 aa6.05□□□□□ -1.44
PHGDH-219ENST00000641513 CARD19Q96LW7 228 aa6.05□□□□□ -1.44
PHGDH-219ENST00000641513 Q9H8V8 135 aa6.05□□□□□ -1.44
PHGDH-219ENST00000641513 KLK12Q9UKR0 248 aa6.05□□□□□ -1.44
PHGDH-219ENST00000641513 IGLV10-54A0A075B6I4 117 aa6.04□□□□□ -1.44
PHGDH-219ENST00000641513 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
PHGDH-219ENST00000641513 C9JAW5 83 aa6.04□□□□□ -1.44
PHGDH-219ENST00000641513 CRPP02741 224 aa6.04□□□□□ -1.44
PHGDH-219ENST00000641513 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
PHGDH-219ENST00000641513 TGP01266 2768 aa6.03□□□□□ -1.44
PHGDH-219ENST00000641513 FAM240AA0A1B0GVK7 77 aa6.03□□□□□ -1.44
PHGDH-219ENST00000641513 CCL18P55774 89 aa6.03□□□□□ -1.44
PHGDH-219ENST00000641513 C21orf62-AS1Q17RA5 79 aa6.03□□□□□ -1.44
PHGDH-219ENST00000641513 CHCHD10Q8WYQ3 142 aaPredicted RBP6.03□□□□□ -1.44
PHGDH-219ENST00000641513 TOMM7Q9P0U1 55 aa6.03□□□□□ -1.44
PHGDH-219ENST00000641513 A0A087WZ39 114 aa6.02□□□□□ -1.45
PHGDH-219ENST00000641513 IGHV3OR16-9A0A0B4J2B5 98 aa6.02□□□□□ -1.45
PHGDH-219ENST00000641513 IBA57-AS1B1ANH7 110 aa6.02□□□□□ -1.45
PHGDH-219ENST00000641513 COX7A2LO14548 114 aa6.02□□□□□ -1.45
PHGDH-219ENST00000641513 MTURNQ8N3F0 131 aa6.02□□□□□ -1.45
PHGDH-219ENST00000641513 COX7B2Q8TF08 81 aa6.02□□□□□ -1.45
PHGDH-219ENST00000641513 UBE2WQ96B02 151 aa6.02□□□□□ -1.45
PHGDH-219ENST00000641513 CDIP1Q9H305 208 aa6.02□□□□□ -1.45
PHGDH-219ENST00000641513 TRAV13-2A0A0B4J235 113 aa6.01□□□□□ -1.45
PHGDH-219ENST00000641513 TRACP01848 142 aa6.01□□□□□ -1.45
PHGDH-219ENST00000641513 MALP21145 153 aa6.01□□□□□ -1.45
PHGDH-219ENST00000641513 CD164L2Q6UWJ8 174 aa6.01□□□□□ -1.45
PHGDH-219ENST00000641513 DNAH9Q9NYC9 4486 aa6.01□□□□□ -1.45
PHGDH-219ENST00000641513 MEIG1Q5JSS6 88 aa6□□□□□ -1.45
PHGDH-219ENST00000641513 UBE2DNLQ8IWF7 75 aa6□□□□□ -1.45
PHGDH-219ENST00000641513 LINC00588Q9Y4M8 146 aa6□□□□□ -1.45
PHGDH-219ENST00000641513 H7C2G1 150 aa5.99□□□□□ -1.45
PHGDH-219ENST00000641513 LINC01556Q5JQF7 62 aa5.99□□□□□ -1.45
PHGDH-219ENST00000641513 ENHOQ6UWT2 76 aa5.99□□□□□ -1.45
PHGDH-219ENST00000641513 C2orf82Q6UX34 121 aa5.99□□□□□ -1.45
PHGDH-219ENST00000641513 MUC7Q8TAX7 377 aa5.99□□□□□ -1.45
PHGDH-219ENST00000641513 KLK5Q9Y337 293 aaPredicted RBP5.99□□□□□ -1.45
PHGDH-219ENST00000641513 MEGF8Q7Z7M0 2845 aa5.98□□□□□ -1.45
PHGDH-219ENST00000641513 TRAV8-4A0A0B4J246 113 aa5.98□□□□□ -1.45
PHGDH-219ENST00000641513 NUPR2A6NF83 97 aa5.98□□□□□ -1.45
PHGDH-219ENST00000641513 CXCL5P42830 114 aa5.98□□□□□ -1.45
PHGDH-219ENST00000641513 RPL28P46779 137 aaKnown RBP5.98□□□□□ -1.45
PHGDH-219ENST00000641513 C6orf226Q5I0X4 101 aa5.98□□□□□ -1.45
PHGDH-219ENST00000641513 CFAP161Q6P656 301 aa5.98□□□□□ -1.45
PHGDH-219ENST00000641513 SOSTDC1Q6X4U4 206 aa5.98□□□□□ -1.45
PHGDH-219ENST00000641513 Q8IZM0 81 aa5.98□□□□□ -1.45
PHGDH-219ENST00000641513 KRTAP17-1Q9BYP8 105 aa5.98□□□□□ -1.45
PHGDH-219ENST00000641513 PRR34Q9NV39 138 aa5.98□□□□□ -1.45
PHGDH-219ENST00000641513 COL7A1Q02388 2944 aa5.98□□□□□ -1.45
PHGDH-219ENST00000641513 A0A0U1RRA0 63 aa5.97□□□□□ -1.45
PHGDH-219ENST00000641513 A0A1B0GV72 72 aa5.97□□□□□ -1.45
PHGDH-219ENST00000641513 ACYP1P07311 99 aa5.97□□□□□ -1.45
PHGDH-219ENST00000641513 DNAH10OSP0CZ25 163 aa5.97□□□□□ -1.45
PHGDH-219ENST00000641513 NPC2P61916 151 aa5.97□□□□□ -1.45
PHGDH-219ENST00000641513 Q6Q795 121 aa5.97□□□□□ -1.45
PHGDH-219ENST00000641513 NTN5Q8WTR8 489 aaPredicted RBP5.97□□□□□ -1.45
PHGDH-219ENST00000641513 C1orf43Q9BWL3 253 aa5.97□□□□□ -1.45
PHGDH-219ENST00000641513 Q9HAA7 133 aa5.97□□□□□ -1.45
PHGDH-219ENST00000641513 IGKV2D-24A0A075B6R9 120 aa5.96□□□□□ -1.46
PHGDH-219ENST00000641513 XGP55808 180 aa5.96□□□□□ -1.46
PHGDH-219ENST00000641513 CKS1BP61024 79 aa5.96□□□□□ -1.46
PHGDH-219ENST00000641513 COX17Q14061 63 aa5.96□□□□□ -1.46
PHGDH-219ENST00000641513 APLNQ9ULZ1 77 aa5.96□□□□□ -1.46
PHGDH-219ENST00000641513 H0YGX0 51 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms