RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 LITAFQ99732 161 aa6.6□□□□□ -1.35
PHGDH-215ENST00000641371 C1orf43Q9BWL3 253 aa6.6□□□□□ -1.35
PHGDH-215ENST00000641371 TENM3Q9P273 2699 aa6.6□□□□□ -1.35
PHGDH-215ENST00000641371 GAGE12HA6NDE8 117 aa6.59□□□□□ -1.35
PHGDH-215ENST00000641371 ENHOQ6UWT2 76 aa6.59□□□□□ -1.35
PHGDH-215ENST00000641371 GTF2H5Q6ZYL4 71 aa6.59□□□□□ -1.35
PHGDH-215ENST00000641371 MUSTN1Q8IVN3 82 aa6.59□□□□□ -1.35
PHGDH-215ENST00000641371 FABP2P12104 132 aa6.58□□□□□ -1.36
PHGDH-215ENST00000641371 VAMP3Q15836 100 aa6.58□□□□□ -1.36
PHGDH-215ENST00000641371 RAB37Q96AX2 223 aa6.58□□□□□ -1.36
PHGDH-215ENST00000641371 IGLV10-54A0A075B6I4 117 aa6.57□□□□□ -1.36
PHGDH-215ENST00000641371 A4D1N5 150 aa6.57□□□□□ -1.36
PHGDH-215ENST00000641371 SPAG11BQ08648 103 aa6.57□□□□□ -1.36
PHGDH-215ENST00000641371 PRO1854Q9UHT4 67 aa6.57□□□□□ -1.36
PHGDH-215ENST00000641371 LINC00588Q9Y4M8 146 aa6.57□□□□□ -1.36
PHGDH-215ENST00000641371 GVQW2A0A096LPI5 108 aaPredicted RBP6.56□□□□□ -1.36
PHGDH-215ENST00000641371 A0A1W2PPM0 123 aa6.56□□□□□ -1.36
PHGDH-215ENST00000641371 CFC1BP0CG36 223 aa6.56□□□□□ -1.36
PHGDH-215ENST00000641371 CFC1P0CG37 223 aa6.56□□□□□ -1.36
PHGDH-215ENST00000641371 LINC00308Q8TCZ7 52 aa6.56□□□□□ -1.36
PHGDH-215ENST00000641371 ERG28Q9UKR5 140 aa6.56□□□□□ -1.36
PHGDH-215ENST00000641371 H3BUT2 72 aa6.55□□□□□ -1.36
PHGDH-215ENST00000641371 LINC00158P58513 81 aa6.55□□□□□ -1.36
PHGDH-215ENST00000641371 UBE2V1Q13404 147 aa6.55□□□□□ -1.36
PHGDH-215ENST00000641371 KIAA0087Q14695 138 aa6.55□□□□□ -1.36
PHGDH-215ENST00000641371 ADAMTSL4-AS1Q5T5F5 129 aa6.55□□□□□ -1.36
PHGDH-215ENST00000641371 Q8N3U1 123 aa6.55□□□□□ -1.36
PHGDH-215ENST00000641371 C2orf48Q96LS8 159 aa6.55□□□□□ -1.36
PHGDH-215ENST00000641371 MEGF8Q7Z7M0 2845 aa6.54□□□□□ -1.36
PHGDH-215ENST00000641371 LOC107984156A0A0G2JMH3 177 aa6.54□□□□□ -1.36
PHGDH-215ENST00000641371 TRBV30A0A0K0K1B3 111 aa6.54□□□□□ -1.36
PHGDH-215ENST00000641371 GAGE10A6NGK3 116 aa6.54□□□□□ -1.36
PHGDH-215ENST00000641371 ZNF561-AS1K7EIQ3 104 aa6.54□□□□□ -1.36
PHGDH-215ENST00000641371 TTC32Q5I0X7 151 aa6.54□□□□□ -1.36
PHGDH-215ENST00000641371 ARL17AQ8IVW1 177 aa6.54□□□□□ -1.36
PHGDH-215ENST00000641371 UBE2DNLQ8IWF7 75 aa6.54□□□□□ -1.36
PHGDH-215ENST00000641371 PGPEP1Q9NXJ5 209 aa6.54□□□□□ -1.36
PHGDH-215ENST00000641371 APLNQ9ULZ1 77 aa6.54□□□□□ -1.36
PHGDH-215ENST00000641371 DYNC2H1Q8NCM8 4307 aaKnown RBP6.54□□□□□ -1.36
PHGDH-215ENST00000641371 TRBV20-1A0A075B6N2 111 aa6.53□□□□□ -1.36
PHGDH-215ENST00000641371 IGKV2D-24A0A075B6R9 120 aa6.53□□□□□ -1.36
PHGDH-215ENST00000641371 TRAV13-2A0A0B4J235 113 aa6.53□□□□□ -1.36
PHGDH-215ENST00000641371 K7ERJ3 54 aa6.53□□□□□ -1.36
PHGDH-215ENST00000641371 KRTAP26-1Q6PEX3 210 aa6.53□□□□□ -1.36
PHGDH-215ENST00000641371 MIR7-3HGQ8N6C7 128 aa6.53□□□□□ -1.36
PHGDH-215ENST00000641371 K7EP34 96 aa6.52□□□□□ -1.37
PHGDH-215ENST00000641371 COX6CP09669 75 aa6.52□□□□□ -1.37
PHGDH-215ENST00000641371 NTN5Q8WTR8 489 aaPredicted RBP6.52□□□□□ -1.37
PHGDH-215ENST00000641371 SPCS1Q9Y6A9 102 aa6.52□□□□□ -1.37
PHGDH-215ENST00000641371 TGP01266 2768 aa6.51□□□□□ -1.37
PHGDH-215ENST00000641371 NDUFC2O95298 119 aa6.51□□□□□ -1.37
PHGDH-215ENST00000641371 TSPAN13O95857 204 aa6.51□□□□□ -1.37
PHGDH-215ENST00000641371 STAB2Q8WWQ8 2551 aa6.51□□□□□ -1.37
PHGDH-215ENST00000641371 PFN2P35080 140 aa6.5□□□□□ -1.37
PHGDH-215ENST00000641371 Q1RN00 199 aa6.5□□□□□ -1.37
PHGDH-215ENST00000641371 SND1-IT1Q9HBX3 110 aa6.5□□□□□ -1.37
PHGDH-215ENST00000641371 A0A0U1RRA0 63 aa6.49□□□□□ -1.37
PHGDH-215ENST00000641371 PSMB2P49721 201 aa6.49□□□□□ -1.37
PHGDH-215ENST00000641371 RNF151Q2KHN1 245 aa6.49□□□□□ -1.37
PHGDH-215ENST00000641371 DAND5Q8N907 189 aa6.49□□□□□ -1.37
PHGDH-215ENST00000641371 CAMK2N2Q96S95 79 aa6.49□□□□□ -1.37
PHGDH-215ENST00000641371 SCGB1C2P0DMR2 95 aa6.48□□□□□ -1.37
PHGDH-215ENST00000641371 NPC2P61916 151 aa6.48□□□□□ -1.37
PHGDH-215ENST00000641371 C14orf177Q52M58 125 aa6.48□□□□□ -1.37
PHGDH-215ENST00000641371 C2orf82Q6UX34 121 aa6.48□□□□□ -1.37
PHGDH-215ENST00000641371 SOSTDC1Q6X4U4 206 aa6.48□□□□□ -1.37
PHGDH-215ENST00000641371 Q9HAA7 133 aa6.48□□□□□ -1.37
PHGDH-215ENST00000641371 PKIGQ9Y2B9 76 aa6.48□□□□□ -1.37
PHGDH-215ENST00000641371 CBY1Q9Y3M2 126 aa6.48□□□□□ -1.37
PHGDH-215ENST00000641371 RPL13AP40429 203 aaKnown RBP6.47□□□□□ -1.37
PHGDH-215ENST00000641371 C15orf56Q8N910 161 aa6.47□□□□□ -1.37
PHGDH-215ENST00000641371 SYCNQ0VAF6 134 aa6.46□□□□□ -1.38
PHGDH-215ENST00000641371 UNQ6190/PRO20217Q6UXQ8 127 aa6.46□□□□□ -1.38
PHGDH-215ENST00000641371 DNAH7Q8WXX0 4024 aa6.45□□□□□ -1.38
PHGDH-215ENST00000641371 PRKDCP78527 4128 aaKnown RBP6.45□□□□□ -1.38
PHGDH-215ENST00000641371 TRBV10-2A0A0K0K1G8 114 aa6.45□□□□□ -1.38
PHGDH-215ENST00000641371 F8W1H4 67 aa6.45□□□□□ -1.38
PHGDH-215ENST00000641371 TLX1NBP0CAT3 122 aa6.45□□□□□ -1.38
PHGDH-215ENST00000641371 ATXN8Q156A1 80 aa6.45□□□□□ -1.38
PHGDH-215ENST00000641371 C6orf48Q9UBA6 75 aa6.45□□□□□ -1.38
PHGDH-215ENST00000641371 COL7A1Q02388 2944 aa6.44□□□□□ -1.38
PHGDH-215ENST00000641371 NDUFC2-KCTD14E9PQ53 114 aa6.44□□□□□ -1.38
PHGDH-215ENST00000641371 EIF4EBP3O60516 100 aaPredicted RBP6.44□□□□□ -1.38
PHGDH-215ENST00000641371 RPL28P46779 137 aaKnown RBP6.44□□□□□ -1.38
PHGDH-215ENST00000641371 HIGD2BQ4VC39 106 aa6.44□□□□□ -1.38
PHGDH-215ENST00000641371 C6orf223Q8N319 242 aa6.44□□□□□ -1.38
PHGDH-215ENST00000641371 CARD19Q96LW7 228 aa6.44□□□□□ -1.38
PHGDH-215ENST00000641371 NAA38Q9BRA0 125 aaKnown RBP6.44□□□□□ -1.38
PHGDH-215ENST00000641371 TMEM126AQ9H061 195 aa6.44□□□□□ -1.38
PHGDH-215ENST00000641371 NBDYA0A0U1RRE5 68 aa6.43□□□□□ -1.38
PHGDH-215ENST00000641371 USP17L23D6RBM5 183 aa6.43□□□□□ -1.38
PHGDH-215ENST00000641371 H0YGX0 51 aa6.43□□□□□ -1.38
PHGDH-215ENST00000641371 H7C2G1 150 aa6.43□□□□□ -1.38
PHGDH-215ENST00000641371 PSCAO43653 123 aa6.43□□□□□ -1.38
PHGDH-215ENST00000641371 C10orf25Q5T742 122 aa6.43□□□□□ -1.38
PHGDH-215ENST00000641371 IGKV2-28A0A075B6P5 120 aa6.42□□□□□ -1.38
PHGDH-215ENST00000641371 M0QXV9 152 aa6.42□□□□□ -1.38
PHGDH-215ENST00000641371 TRIAP1O43715 76 aa6.42□□□□□ -1.38
PHGDH-215ENST00000641371 IGKV2D-28P01615 120 aa6.42□□□□□ -1.38
PHGDH-215ENST00000641371 Q6ZRU5 148 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms