RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 KIAA1644Q3SXP7 199 aa9.94□□□□□ -0.82
PHGDH-213ENST00000641272 FAM19A3Q7Z5A8 133 aa9.94□□□□□ -0.82
PHGDH-213ENST00000641272 NXT2Q9NPJ8 142 aaKnown RBP9.94□□□□□ -0.82
PHGDH-213ENST00000641272 F8VRH5 84 aa9.93□□□□□ -0.82
PHGDH-213ENST00000641272 NUPR1O60356 82 aa9.93□□□□□ -0.82
PHGDH-213ENST00000641272 TSPAN13O95857 204 aa9.93□□□□□ -0.82
PHGDH-213ENST00000641272 NPSP0C0P6 89 aa9.92□□□□□ -0.82
PHGDH-213ENST00000641272 MRPL55Q7Z7F7 128 aaKnown RBP9.92□□□□□ -0.82
PHGDH-213ENST00000641272 A0A087X002 238 aa9.91□□□□□ -0.82
PHGDH-213ENST00000641272 GAGE10A6NGK3 116 aa9.91□□□□□ -0.82
PHGDH-213ENST00000641272 SMIM1B2RUZ4 78 aa9.91□□□□□ -0.82
PHGDH-213ENST00000641272 SEC11AP67812 179 aa9.91□□□□□ -0.82
PHGDH-213ENST00000641272 LBHQ53QV2 105 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-213ENST00000641272 PAPPA-AS1Q5QFB9 102 aa9.91□□□□□ -0.82
PHGDH-213ENST00000641272 TOMM6Q96B49 74 aa9.91□□□□□ -0.82
PHGDH-213ENST00000641272 TIMM17AQ99595 171 aa9.91□□□□□ -0.82
PHGDH-213ENST00000641272 RPL37AP8A6NKH3 93 aa9.9□□□□□ -0.82
PHGDH-213ENST00000641272 K7EMI3 77 aa9.9□□□□□ -0.82
PHGDH-213ENST00000641272 ADCYAP1P18509 176 aa9.89□□□□□ -0.83
PHGDH-213ENST00000641272 CXCL5P42830 114 aa9.89□□□□□ -0.83
PHGDH-213ENST00000641272 SCGB3A1Q96QR1 104 aa9.89□□□□□ -0.83
PHGDH-213ENST00000641272 CARHSP1Q9Y2V2 147 aaKnown RBP9.89□□□□□ -0.83
PHGDH-213ENST00000641272 BCE1O60756 84 aa9.88□□□□□ -0.83
PHGDH-213ENST00000641272 COX7B2Q8TF08 81 aa9.88□□□□□ -0.83
PHGDH-213ENST00000641272 TP73-AS1Q9UF72 201 aa9.88□□□□□ -0.83
PHGDH-213ENST00000641272 SPINK8P0C7L1 97 aa9.87□□□□□ -0.83
PHGDH-213ENST00000641272 RPL28P46779 137 aaKnown RBP9.87□□□□□ -0.83
PHGDH-213ENST00000641272 LINC00167Q96N53 147 aa9.87□□□□□ -0.83
PHGDH-213ENST00000641272 ANAPC11Q9NYG5 84 aa9.87□□□□□ -0.83
PHGDH-213ENST00000641272 RAB5BP61020 215 aa9.86□□□□□ -0.83
PHGDH-213ENST00000641272 RAB14P61106 215 aa9.86□□□□□ -0.83
PHGDH-213ENST00000641272 ERASQ7Z444 233 aa9.86□□□□□ -0.83
PHGDH-213ENST00000641272 SCO1O75880 301 aa9.85□□□□□ -0.83
PHGDH-213ENST00000641272 MUC2Q02817 5179 aa9.85□□□□□ -0.83
PHGDH-213ENST00000641272 TINCRA0A1B0GVN0 87 aa9.84□□□□□ -0.83
PHGDH-213ENST00000641272 G0S2P27469 103 aa9.84□□□□□ -0.83
PHGDH-213ENST00000641272 PDZD11Q5EBL8 140 aa9.84□□□□□ -0.83
PHGDH-213ENST00000641272 TYMSOSQ8TAI1 123 aa9.84□□□□□ -0.83
PHGDH-213ENST00000641272 IGLV5-45A0A087WSX0 123 aa9.83□□□□□ -0.84
PHGDH-213ENST00000641272 CRYGAP11844 174 aa9.83□□□□□ -0.84
PHGDH-213ENST00000641272 UBE2AP49459 152 aa9.82□□□□□ -0.84
PHGDH-213ENST00000641272 NKAPP1Q8N9T2 125 aa9.82□□□□□ -0.84
PHGDH-213ENST00000641272 IGKV2-28A0A075B6P5 120 aa9.81□□□□□ -0.84
PHGDH-213ENST00000641272 IGKV2D-28P01615 120 aa9.81□□□□□ -0.84
PHGDH-213ENST00000641272 RETNLBQ9BQ08 111 aa9.81□□□□□ -0.84
PHGDH-213ENST00000641272 KRTAP13-2Q52LG2 175 aa9.8□□□□□ -0.84
PHGDH-213ENST00000641272 CST9LQ9H4G1 147 aa9.8□□□□□ -0.84
PHGDH-213ENST00000641272 IGLV5-37A0A075B6J1 123 aa9.79□□□□□ -0.84
PHGDH-213ENST00000641272 PFN2P35080 140 aa9.79□□□□□ -0.84
PHGDH-213ENST00000641272 PRLHP81277 87 aa9.78□□□□□ -0.84
PHGDH-213ENST00000641272 CLLU1Q5K131 121 aa9.78□□□□□ -0.84
PHGDH-213ENST00000641272 FA2HQ7L5A8 372 aa9.78□□□□□ -0.84
PHGDH-213ENST00000641272 KRTAP13-1Q8IUC0 172 aa9.78□□□□□ -0.84
PHGDH-213ENST00000641272 TRAV9-1A0A075B6T8 112 aa9.77□□□□□ -0.85
PHGDH-213ENST00000641272 ATP5LO75964 103 aa9.77□□□□□ -0.85
PHGDH-213ENST00000641272 PMVKQ15126 192 aa9.77□□□□□ -0.85
PHGDH-213ENST00000641272 SMCO4Q9NRQ5 59 aa9.77□□□□□ -0.85
PHGDH-213ENST00000641272 LINC01546A6NGU7 62 aa9.76□□□□□ -0.85
PHGDH-213ENST00000641272 S100PP25815 95 aa9.76□□□□□ -0.85
PHGDH-213ENST00000641272 TMEM218A2RU14 115 aa9.75□□□□□ -0.85
PHGDH-213ENST00000641272 H3BRM9 83 aa9.75□□□□□ -0.85
PHGDH-213ENST00000641272 NDUFA6P56556 154 aa9.75□□□□□ -0.85
PHGDH-213ENST00000641272 GNB1LQ9BYB4 327 aa9.75□□□□□ -0.85
PHGDH-213ENST00000641272 MRPL18Q9H0U6 180 aaKnown RBP9.75□□□□□ -0.85
PHGDH-213ENST00000641272 TMEM238C9JI98 176 aa9.74□□□□□ -0.85
PHGDH-213ENST00000641272 LINC01549A6NIU2 74 aa9.73□□□□□ -0.85
PHGDH-213ENST00000641272 IGLC3P0DOY3 106 aa9.73□□□□□ -0.85
PHGDH-213ENST00000641272 VPREB1P12018 145 aa9.73□□□□□ -0.85
PHGDH-213ENST00000641272 ZNF22P17026 224 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-213ENST00000641272 FABP9Q0Z7S8 132 aa9.73□□□□□ -0.85
PHGDH-213ENST00000641272 FAM19A1Q7Z5A9 133 aa9.73□□□□□ -0.85
PHGDH-213ENST00000641272 LINC00304Q8N9R0 145 aa9.73□□□□□ -0.85
PHGDH-213ENST00000641272 ZNF625Q96I27 306 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-213ENST00000641272 A0A096LNJ9 63 aa9.72□□□□□ -0.85
PHGDH-213ENST00000641272 A0A0U1RQV1 116 aa9.72□□□□□ -0.85
PHGDH-213ENST00000641272 Q8NDZ9 215 aa9.72□□□□□ -0.85
PHGDH-213ENST00000641272 SND1-IT1Q9HBX3 110 aa9.72□□□□□ -0.85
PHGDH-213ENST00000641272 ERG28Q9UKR5 140 aa9.72□□□□□ -0.85
PHGDH-213ENST00000641272 IGLV5-39A0A0G2JS06 123 aa9.71□□□□□ -0.86
PHGDH-213ENST00000641272 UQCC3Q6UW78 93 aa9.71□□□□□ -0.86
PHGDH-213ENST00000641272 TMEM126AQ9H061 195 aa9.71□□□□□ -0.86
PHGDH-213ENST00000641272 PMCHL1Q16048 86 aa9.7□□□□□ -0.86
PHGDH-213ENST00000641272 FAM229BQ4G0N7 80 aa9.7□□□□□ -0.86
PHGDH-213ENST00000641272 IGKV2D-26A0A0A0MRZ7 120 aa9.69□□□□□ -0.86
PHGDH-213ENST00000641272 URB1-AS1Q96HZ7 61 aa9.69□□□□□ -0.86
PHGDH-213ENST00000641272 MUC17Q685J3 4493 aa9.68□□□□□ -0.86
PHGDH-213ENST00000641272 M0R378 163 aa9.68□□□□□ -0.86
PHGDH-213ENST00000641272 C3orf22Q8N5N4 141 aa9.68□□□□□ -0.86
PHGDH-213ENST00000641272 SEC11CQ9BY50 192 aa9.68□□□□□ -0.86
PHGDH-213ENST00000641272 C11orf86A6NJI1 115 aa9.67□□□□□ -0.86
PHGDH-213ENST00000641272 IFITM2Q01629 132 aa9.67□□□□□ -0.86
PHGDH-213ENST00000641272 COX19Q49B96 90 aa9.67□□□□□ -0.86
PHGDH-213ENST00000641272 HBDP02042 147 aa9.66□□□□□ -0.86
PHGDH-213ENST00000641272 TMEM170BQ5T4T1 132 aa9.66□□□□□ -0.86
PHGDH-213ENST00000641272 COMMD7Q86VX2 200 aa9.66□□□□□ -0.86
PHGDH-213ENST00000641272 C18orf32Q8TCD1 76 aa9.66□□□□□ -0.86
PHGDH-213ENST00000641272 HIGD2AQ9BW72 106 aa9.66□□□□□ -0.86
PHGDH-213ENST00000641272 RPS10P5Q9NQ39 176 aa9.66□□□□□ -0.86
PHGDH-213ENST00000641272 RPL24P83731 157 aaKnown RBP9.65□□□□□ -0.86
PHGDH-213ENST00000641272 FAT4Q6V0I7 4981 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms