RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 FAM19A2Q8N3H0 131 aa13.7□□□□□ -0.22
SCN1B-206ENST00000638536 SMIM1B2RUZ4 78 aa13.69□□□□□ -0.22
SCN1B-206ENST00000638536 C9orf116Q5BN46 136 aaPredicted RBP13.69□□□□□ -0.22
SCN1B-206ENST00000638536 BAGE3Q86Y29 109 aa13.69□□□□□ -0.22
SCN1B-206ENST00000638536 LRP1Q07954 4544 aaKnown RBP13.69□□□□□ -0.22
SCN1B-206ENST00000638536 Q6ZRP5 223 aa13.68□□□□□ -0.22
SCN1B-206ENST00000638536 PACRGQ96M98 296 aaPredicted RBP13.68□□□□□ -0.22
SCN1B-206ENST00000638536 A0A1W2PNN7 141 aa13.68□□□□□ -0.22
SCN1B-206ENST00000638536 RPL37AP61513 92 aaKnown RBP13.68□□□□□ -0.22
SCN1B-206ENST00000638536 Q8IZM0 81 aa13.68□□□□□ -0.22
SCN1B-206ENST00000638536 LINC00474Q9P2X8 69 aa13.68□□□□□ -0.22
SCN1B-206ENST00000638536 NUPR1O60356 82 aa13.67□□□□□ -0.22
SCN1B-206ENST00000638536 SPINK8P0C7L1 97 aa13.67□□□□□ -0.22
SCN1B-206ENST00000638536 IGLC3P0DOY3 106 aa13.67□□□□□ -0.22
SCN1B-206ENST00000638536 C6orf226Q5I0X4 101 aa13.67□□□□□ -0.22
SCN1B-206ENST00000638536 PKIGQ9Y2B9 76 aa13.67□□□□□ -0.22
SCN1B-206ENST00000638536 ATP5LO75964 103 aa13.66□□□□□ -0.22
SCN1B-206ENST00000638536 PRSS2P07478 247 aa13.66□□□□□ -0.22
SCN1B-206ENST00000638536 SERF1AO75920 110 aa13.65□□□□□ -0.22
SCN1B-206ENST00000638536 HNRNPA3P51991 378 aaKnown RBP13.65□□□□□ -0.22
SCN1B-206ENST00000638536 HSBP1O75506 76 aa13.64□□□□□ -0.23
SCN1B-206ENST00000638536 TLX1NBP0CAT3 122 aa13.64□□□□□ -0.23
SCN1B-206ENST00000638536 TRBV30A0A0K0K1B3 111 aa13.64□□□□□ -0.23
SCN1B-206ENST00000638536 LOC105371267A0A1B0GV96 52 aa13.64□□□□□ -0.23
SCN1B-206ENST00000638536 ZNF22P17026 224 aaPredicted RBP13.64□□□□□ -0.23
SCN1B-206ENST00000638536 FAT3Q8TDW7 4589 aa13.63□□□□□ -0.23
SCN1B-206ENST00000638536 CKS1BP61024 79 aa13.63□□□□□ -0.23
SCN1B-206ENST00000638536 C11orf86A6NJI1 115 aa13.62□□□□□ -0.23
SCN1B-206ENST00000638536 GAGE2EQ4V326 116 aa13.62□□□□□ -0.23
SCN1B-206ENST00000638536 IFI27L1Q96BM0 104 aa13.62□□□□□ -0.23
SCN1B-206ENST00000638536 GAGE2DQ9UEU5 116 aa13.62□□□□□ -0.23
SCN1B-206ENST00000638536 FAM168BA1KXE4 195 aa13.61□□□□□ -0.23
SCN1B-206ENST00000638536 COX7B2Q8TF08 81 aa13.61□□□□□ -0.23
SCN1B-206ENST00000638536 DMBT1Q9UGM3 2413 aaPredicted RBP13.6□□□□□ -0.23
SCN1B-206ENST00000638536 CHTOPQ9Y3Y2 248 aaKnown RBP13.59□□□□□ -0.23
SCN1B-206ENST00000638536 HERC1Q15751 4861 aa13.59□□□□□ -0.23
SCN1B-206ENST00000638536 NDUFC2-KCTD14E9PQ53 114 aa13.58□□□□□ -0.24
SCN1B-206ENST00000638536 F8VRH5 84 aa13.58□□□□□ -0.24
SCN1B-206ENST00000638536 KRTAP7-1Q8IUC3 87 aa13.58□□□□□ -0.24
SCN1B-206ENST00000638536 IGLV5-39A0A0G2JS06 123 aa13.57□□□□□ -0.24
SCN1B-206ENST00000638536 H3BRM9 83 aa13.57□□□□□ -0.24
SCN1B-206ENST00000638536 C7orf33Q8WU49 177 aa13.57□□□□□ -0.24
SCN1B-206ENST00000638536 TRAV12-1A0A0B4J245 112 aa13.57□□□□□ -0.24
SCN1B-206ENST00000638536 C9orf129Q5T035 196 aaKnown RBP13.57□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BKO60814 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BJP06899 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BOP23527 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BBP33778 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BDP58876 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BCP62807 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST2H2BEQ16778 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.56□□□□□ -0.24
SCN1B-206ENST00000638536 PHF5AQ7RTV0 110 aaKnown RBP13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BHQ93079 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BNQ99877 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 HIST1H2BMQ99879 126 aa13.56□□□□□ -0.24
SCN1B-206ENST00000638536 TMEM170BQ5T4T1 132 aa13.55□□□□□ -0.24
SCN1B-206ENST00000638536 LEPROTL1O95214 131 aa13.54□□□□□ -0.24
SCN1B-206ENST00000638536 H0Y8G0 127 aa13.53□□□□□ -0.24
SCN1B-206ENST00000638536 CXCL5P42830 114 aa13.53□□□□□ -0.24
SCN1B-206ENST00000638536 FABP4P15090 132 aa13.53□□□□□ -0.24
SCN1B-206ENST00000638536 PRR3P79522 188 aaKnown RBP13.53□□□□□ -0.24
SCN1B-206ENST00000638536 FAM19A5Q7Z5A7 132 aaPredicted RBP13.53□□□□□ -0.24
SCN1B-206ENST00000638536 XAGE1AQ9HD64 81 aa13.52□□□□□ -0.25
SCN1B-206ENST00000638536 KRTAP11-1Q8IUC1 163 aa13.51□□□□□ -0.25
SCN1B-206ENST00000638536 ODF1Q14990 250 aa13.5□□□□□ -0.25
SCN1B-206ENST00000638536 TMEM223A0PJW6 202 aa13.49□□□□□ -0.25
SCN1B-206ENST00000638536 SERTAD4-AS1Q5TG53 156 aa13.48□□□□□ -0.25
SCN1B-206ENST00000638536 PMCHL2Q9BQD1 86 aa13.46□□□□□ -0.26
SCN1B-206ENST00000638536 PSORS1C2Q9UIG4 136 aa13.46□□□□□ -0.26
SCN1B-206ENST00000638536 ZNF625Q96I27 306 aaPredicted RBP13.45□□□□□ -0.26
SCN1B-206ENST00000638536 HSPB8Q9UJY1 196 aa13.45□□□□□ -0.26
SCN1B-206ENST00000638536 M0QXV9 152 aa13.44□□□□□ -0.26
SCN1B-206ENST00000638536 KRTAP29-1A8MX34 341 aaPredicted RBP13.43□□□□□ -0.26
SCN1B-206ENST00000638536 PFN2P35080 140 aa13.42□□□□□ -0.26
SCN1B-206ENST00000638536 TNXBP22105 4242 aa13.4□□□□□ -0.26
SCN1B-206ENST00000638536 ERG28Q9UKR5 140 aa13.39□□□□□ -0.27
SCN1B-206ENST00000638536 C22orf24Q9Y442 160 aa13.39□□□□□ -0.27
SCN1B-206ENST00000638536 SRSF9Q13242 221 aaKnown RBP eCLIP13.39□□□□□ -0.27
SCN1B-206ENST00000638536 C1orf137Q5JT78 98 aa13.38□□□□□ -0.27
SCN1B-206ENST00000638536 J3QL48 77 aa13.37□□□□□ -0.27
SCN1B-206ENST00000638536 COA6Q5JTJ3 125 aaKnown RBP13.37□□□□□ -0.27
SCN1B-206ENST00000638536 MAP1LC3CQ9BXW4 147 aa13.37□□□□□ -0.27
SCN1B-206ENST00000638536 TSPEAR-AS2P59090 65 aa13.36□□□□□ -0.27
SCN1B-206ENST00000638536 DPM2O94777 84 aa13.35□□□□□ -0.27
SCN1B-206ENST00000638536 OXTP01178 125 aa13.35□□□□□ -0.27
SCN1B-206ENST00000638536 PLNP26678 52 aa13.35□□□□□ -0.27
SCN1B-206ENST00000638536 UBE2BP63146 152 aa13.35□□□□□ -0.27
SCN1B-206ENST00000638536 A0A0U1RRA0 63 aa13.34□□□□□ -0.27
SCN1B-206ENST00000638536 SYS1-DBNDD2H3BUS1 97 aa13.34□□□□□ -0.27
SCN1B-206ENST00000638536 IGKCP01834 107 aa13.34□□□□□ -0.27
SCN1B-206ENST00000638536 SND1-IT1Q9HBX3 110 aa13.34□□□□□ -0.27
SCN1B-206ENST00000638536 COX17Q14061 63 aa13.32□□□□□ -0.28
SCN1B-206ENST00000638536 Q8NDZ9 215 aa13.32□□□□□ -0.28
SCN1B-206ENST00000638536 PLA2G2DQ9UNK4 145 aa13.32□□□□□ -0.28
SCN1B-206ENST00000638536 SPINK6Q6UWN8 80 aa13.31□□□□□ -0.28
SCN1B-206ENST00000638536 SFTA2Q6UW10 78 aa13.31□□□□□ -0.28
SCN1B-206ENST00000638536 MRPL55Q7Z7F7 128 aaKnown RBP13.31□□□□□ -0.28
SCN1B-206ENST00000638536 LEPROTO15243 131 aa13.3□□□□□ -0.28
SCN1B-206ENST00000638536 IGLV7-43P04211 117 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms