RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ERASQ7Z444 233 aa10.85□□□□□ -0.67
PNKP-230ENST00000638016 LINC00469Q8N7U9 141 aa10.85□□□□□ -0.67
PNKP-230ENST00000638016 PACRGQ96M98 296 aaPredicted RBP10.85□□□□□ -0.67
PNKP-230ENST00000638016 HERVK_113P63121 156 aa10.84□□□□□ -0.67
PNKP-230ENST00000638016 RHEBQ15382 184 aa10.84□□□□□ -0.67
PNKP-230ENST00000638016 Q8IZM0 81 aa10.84□□□□□ -0.67
PNKP-230ENST00000638016 GEMIN7Q9H840 131 aaKnown RBP10.84□□□□□ -0.67
PNKP-230ENST00000638016 M0QXV9 152 aa10.83□□□□□ -0.68
PNKP-230ENST00000638016 G0S2P27469 103 aa10.82□□□□□ -0.68
PNKP-230ENST00000638016 CKS1BP61024 79 aa10.82□□□□□ -0.68
PNKP-230ENST00000638016 C6orf226Q5I0X4 101 aa10.82□□□□□ -0.68
PNKP-230ENST00000638016 PAPPA-AS1Q5QFB9 102 aa10.82□□□□□ -0.68
PNKP-230ENST00000638016 REG3GQ6UW15 175 aa10.82□□□□□ -0.68
PNKP-230ENST00000638016 URB1-AS1Q96HZ7 61 aa10.82□□□□□ -0.68
PNKP-230ENST00000638016 SMIM1B2RUZ4 78 aa10.81□□□□□ -0.68
PNKP-230ENST00000638016 KRTAP10-8P60410 259 aa10.81□□□□□ -0.68
PNKP-230ENST00000638016 FA2HQ7L5A8 372 aa10.81□□□□□ -0.68
PNKP-230ENST00000638016 XAGE1AQ9HD64 81 aa10.81□□□□□ -0.68
PNKP-230ENST00000638016 A0A096LNJ9 63 aa10.8□□□□□ -0.68
PNKP-230ENST00000638016 IGLV7-43P04211 117 aa10.8□□□□□ -0.68
PNKP-230ENST00000638016 SEC11AP67812 179 aa10.8□□□□□ -0.68
PNKP-230ENST00000638016 CST9LQ9H4G1 147 aa10.8□□□□□ -0.68
PNKP-230ENST00000638016 COX19Q49B96 90 aa10.79□□□□□ -0.68
PNKP-230ENST00000638016 SMCO4Q9NRQ5 59 aa10.79□□□□□ -0.68
PNKP-230ENST00000638016 LRP2P98164 4655 aa10.79□□□□□ -0.68
PNKP-230ENST00000638016 TINCRA0A1B0GVN0 87 aa10.78□□□□□ -0.68
PNKP-230ENST00000638016 APOC3P02656 99 aa10.78□□□□□ -0.68
PNKP-230ENST00000638016 SPINK8P0C7L1 97 aa10.78□□□□□ -0.68
PNKP-230ENST00000638016 PMCHL1Q16048 86 aa10.78□□□□□ -0.68
PNKP-230ENST00000638016 TRAPPC1Q9Y5R8 145 aa10.78□□□□□ -0.68
PNKP-230ENST00000638016 IGLV5-45A0A087WSX0 123 aa10.77□□□□□ -0.69
PNKP-230ENST00000638016 UBE2BP63146 152 aa10.77□□□□□ -0.69
PNKP-230ENST00000638016 C18orf32Q8TCD1 76 aa10.77□□□□□ -0.69
PNKP-230ENST00000638016 F8VRH5 84 aa10.76□□□□□ -0.69
PNKP-230ENST00000638016 PMVKQ15126 192 aa10.76□□□□□ -0.69
PNKP-230ENST00000638016 COX7B2Q8TF08 81 aa10.75□□□□□ -0.69
PNKP-230ENST00000638016 PDZD11Q5EBL8 140 aa10.74□□□□□ -0.69
PNKP-230ENST00000638016 C22orf24Q9Y442 160 aa10.73□□□□□ -0.69
PNKP-230ENST00000638016 LINC01549A6NIU2 74 aa10.72□□□□□ -0.69
PNKP-230ENST00000638016 CXCL5P42830 114 aa10.72□□□□□ -0.69
PNKP-230ENST00000638016 NDUFA6P56556 154 aa10.72□□□□□ -0.69
PNKP-230ENST00000638016 PRR26Q8N8Z3 221 aa10.72□□□□□ -0.69
PNKP-230ENST00000638016 H0Y9J4 135 aa10.71□□□□□ -0.69
PNKP-230ENST00000638016 LINC00614P0C842 121 aa10.71□□□□□ -0.69
PNKP-230ENST00000638016 RAB5BP61020 215 aa10.71□□□□□ -0.69
PNKP-230ENST00000638016 DIRC1Q969H9 104 aa10.71□□□□□ -0.69
PNKP-230ENST00000638016 SNAPINO95295 136 aa10.7□□□□□ -0.7
PNKP-230ENST00000638016 IGLC3P0DOY3 106 aa10.7□□□□□ -0.7
PNKP-230ENST00000638016 SVBPQ8N300 66 aa10.7□□□□□ -0.7
PNKP-230ENST00000638016 YPEL4Q96NS1 127 aa10.7□□□□□ -0.7
PNKP-230ENST00000638016 HBDP02042 147 aa10.69□□□□□ -0.7
PNKP-230ENST00000638016 KRTAP1-4P0C5Y4 121 aa10.69□□□□□ -0.7
PNKP-230ENST00000638016 ZNF22P17026 224 aaPredicted RBP10.69□□□□□ -0.7
PNKP-230ENST00000638016 NDUFA5Q16718 116 aa10.68□□□□□ -0.7
PNKP-230ENST00000638016 IGLV5-39A0A0G2JS06 123 aa10.66□□□□□ -0.7
PNKP-230ENST00000638016 H3BRM9 83 aa10.66□□□□□ -0.7
PNKP-230ENST00000638016 MRPL55Q7Z7F7 128 aaKnown RBP10.66□□□□□ -0.7
PNKP-230ENST00000638016 GAGE10A6NGK3 116 aa10.65□□□□□ -0.7
PNKP-230ENST00000638016 C11orf86A6NJI1 115 aa10.65□□□□□ -0.7
PNKP-230ENST00000638016 SCO1O75880 301 aa10.65□□□□□ -0.7
PNKP-230ENST00000638016 RPL37AP8A6NKH3 93 aa10.64□□□□□ -0.71
PNKP-230ENST00000638016 BAGE3Q86Y29 109 aa10.64□□□□□ -0.71
PNKP-230ENST00000638016 CBLN2Q8IUK8 224 aa10.64□□□□□ -0.71
PNKP-230ENST00000638016 PFN2P35080 140 aa10.63□□□□□ -0.71
PNKP-230ENST00000638016 LBHQ53QV2 105 aaPredicted RBP10.63□□□□□ -0.71
PNKP-230ENST00000638016 LINC00167Q96N53 147 aa10.63□□□□□ -0.71
PNKP-230ENST00000638016 TP73-AS1Q9UF72 201 aa10.63□□□□□ -0.71
PNKP-230ENST00000638016 LPAP08519 4548 aa10.62□□□□□ -0.71
PNKP-230ENST00000638016 ATP5LO75964 103 aa10.62□□□□□ -0.71
PNKP-230ENST00000638016 ZNF625Q96I27 306 aaPredicted RBP10.62□□□□□ -0.71
PNKP-230ENST00000638016 ZNF861PO60384 105 aa10.61□□□□□ -0.71
PNKP-230ENST00000638016 NUPR1O60356 82 aa10.6□□□□□ -0.71
PNKP-230ENST00000638016 TMEM170BQ5T4T1 132 aa10.6□□□□□ -0.71
PNKP-230ENST00000638016 Q8NDZ9 215 aa10.59□□□□□ -0.71
PNKP-230ENST00000638016 CHTOPQ9Y3Y2 248 aaKnown RBP10.59□□□□□ -0.71
PNKP-230ENST00000638016 IGLV5-37A0A075B6J1 123 aa10.58□□□□□ -0.72
PNKP-230ENST00000638016 BCE1O60756 84 aa10.58□□□□□ -0.72
PNKP-230ENST00000638016 ERG28Q9UKR5 140 aa10.58□□□□□ -0.72
PNKP-230ENST00000638016 IGLV1-50A0A075B6I6 118 aa10.57□□□□□ -0.72
PNKP-230ENST00000638016 FAM19A2Q8N3H0 131 aa10.57□□□□□ -0.72
PNKP-230ENST00000638016 SND1-IT1Q9HBX3 110 aa10.57□□□□□ -0.72
PNKP-230ENST00000638016 NKAPP1Q8N9T2 125 aa10.56□□□□□ -0.72
PNKP-230ENST00000638016 IFI27L1Q96BM0 104 aa10.56□□□□□ -0.72
PNKP-230ENST00000638016 CHCHD1Q96BP2 118 aaKnown RBP10.56□□□□□ -0.72
PNKP-230ENST00000638016 RNF213Q63HN8 5207 aa10.56□□□□□ -0.72
PNKP-230ENST00000638016 IGKV2-28A0A075B6P5 120 aa10.55□□□□□ -0.72
PNKP-230ENST00000638016 IGKV2D-28P01615 120 aa10.55□□□□□ -0.72
PNKP-230ENST00000638016 VPREB1P12018 145 aa10.55□□□□□ -0.72
PNKP-230ENST00000638016 SLC7A5P1Q8MH63 180 aa10.55□□□□□ -0.72
PNKP-230ENST00000638016 TRGC2P03986 189 aa10.54□□□□□ -0.72
PNKP-230ENST00000638016 A0A0U1RRA0 63 aa10.53□□□□□ -0.72
PNKP-230ENST00000638016 TMEM223A0PJW6 202 aa10.53□□□□□ -0.72
PNKP-230ENST00000638016 RPL28P46779 137 aaKnown RBP10.53□□□□□ -0.72
PNKP-230ENST00000638016 LINC00310P59036 64 aa10.53□□□□□ -0.72
PNKP-230ENST00000638016 A0A087X002 238 aa10.52□□□□□ -0.73
PNKP-230ENST00000638016 TRAV12-1A0A0B4J245 112 aa10.52□□□□□ -0.73
PNKP-230ENST00000638016 KRTAP13-1Q8IUC0 172 aa10.52□□□□□ -0.73
PNKP-230ENST00000638016 ANAPC11Q9NYG5 84 aa10.52□□□□□ -0.73
PNKP-230ENST00000638016 TMEM238C9JI98 176 aa10.51□□□□□ -0.73
PNKP-230ENST00000638016 HSBP1O75506 76 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms