RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 LY6G6CO95867 125 aa7.79□□□□□ -1.16
CLN6-223ENST00000637823 SRSF9Q13242 221 aaKnown RBP eCLIP7.79□□□□□ -1.16
CLN6-223ENST00000637823 NTN5Q8WTR8 489 aaPredicted RBP7.79□□□□□ -1.16
CLN6-223ENST00000637823 LINC00476Q8WZB0 136 aa7.79□□□□□ -1.16
CLN6-223ENST00000637823 HIST1H4GQ99525 98 aa7.79□□□□□ -1.16
CLN6-223ENST00000637823 GVQW2A0A096LPI5 108 aaPredicted RBP7.78□□□□□ -1.16
CLN6-223ENST00000637823 PSCAO43653 123 aa7.78□□□□□ -1.16
CLN6-223ENST00000637823 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
CLN6-223ENST00000637823 C2orf82Q6UX34 121 aa7.78□□□□□ -1.16
CLN6-223ENST00000637823 Q6ZR54 194 aa7.78□□□□□ -1.16
CLN6-223ENST00000637823 Q6ZVH6 145 aa7.78□□□□□ -1.16
CLN6-223ENST00000637823 C2orf48Q96LS8 159 aa7.78□□□□□ -1.16
CLN6-223ENST00000637823 LITAFQ99732 161 aa7.78□□□□□ -1.16
CLN6-223ENST00000637823 DNAH1Q9P2D7 4330 aa7.77□□□□□ -1.16
CLN6-223ENST00000637823 USP17L23D6RBM5 183 aa7.77□□□□□ -1.17
CLN6-223ENST00000637823 M0R143 59 aa7.77□□□□□ -1.17
CLN6-223ENST00000637823 M0R2N4 97 aa7.77□□□□□ -1.17
CLN6-223ENST00000637823 HINT1P49773 126 aaPredicted RBP7.77□□□□□ -1.17
CLN6-223ENST00000637823 HIGD2BQ4VC39 106 aa7.77□□□□□ -1.17
CLN6-223ENST00000637823 MEIG1Q5JSS6 88 aa7.77□□□□□ -1.17
CLN6-223ENST00000637823 C6orf223Q8N319 242 aa7.77□□□□□ -1.17
CLN6-223ENST00000637823 SPANXDQ9BXN6 97 aa7.77□□□□□ -1.17
CLN6-223ENST00000637823 SPANXCQ9NY87 97 aa7.77□□□□□ -1.17
CLN6-223ENST00000637823 LYSTQ99698 3801 aa7.76□□□□□ -1.17
CLN6-223ENST00000637823 SMIM13P0DJ93 91 aa7.76□□□□□ -1.17
CLN6-223ENST00000637823 ADAMTSL4-AS1Q5T5F5 129 aa7.76□□□□□ -1.17
CLN6-223ENST00000637823 UNQ6190/PRO20217Q6UXQ8 127 aa7.76□□□□□ -1.17
CLN6-223ENST00000637823 CEND1Q8N111 149 aa7.76□□□□□ -1.17
CLN6-223ENST00000637823 LINC00526Q96FQ7 95 aa7.76□□□□□ -1.17
CLN6-223ENST00000637823 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
CLN6-223ENST00000637823 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
CLN6-223ENST00000637823 COX17Q14061 63 aa7.75□□□□□ -1.17
CLN6-223ENST00000637823 BVES-AS1Q5T3Y7 98 aa7.75□□□□□ -1.17
CLN6-223ENST00000637823 CAMK2N2Q96S95 79 aa7.75□□□□□ -1.17
CLN6-223ENST00000637823 ERG28Q9UKR5 140 aa7.75□□□□□ -1.17
CLN6-223ENST00000637823 TRBV30A0A0K0K1B3 111 aa7.74□□□□□ -1.17
CLN6-223ENST00000637823 IFITM1P13164 125 aa7.74□□□□□ -1.17
CLN6-223ENST00000637823 GCSHP23434 173 aa7.74□□□□□ -1.17
CLN6-223ENST00000637823 LINC00158P58513 81 aa7.74□□□□□ -1.17
CLN6-223ENST00000637823 C10orf25Q5T742 122 aa7.74□□□□□ -1.17
CLN6-223ENST00000637823 Q6ZRN7 208 aaPredicted RBP7.74□□□□□ -1.17
CLN6-223ENST00000637823 COPS9Q8WXC6 57 aa7.74□□□□□ -1.17
CLN6-223ENST00000637823 SNHG12Q9BXW3 62 aa7.74□□□□□ -1.17
CLN6-223ENST00000637823 RYR3Q15413 4870 aa7.74□□□□□ -1.17
CLN6-223ENST00000637823 DNAH6Q9C0G6 4158 aa7.74□□□□□ -1.17
CLN6-223ENST00000637823 KMT2CQ8NEZ4 4911 aaKnown RBP7.73□□□□□ -1.17
CLN6-223ENST00000637823 A0A0U1RRA0 63 aa7.73□□□□□ -1.17
CLN6-223ENST00000637823 PFN2P35080 140 aa7.73□□□□□ -1.17
CLN6-223ENST00000637823 PTTG1IPP53801 180 aa7.73□□□□□ -1.17
CLN6-223ENST00000637823 SYCNQ0VAF6 134 aa7.73□□□□□ -1.17
CLN6-223ENST00000637823 C14orf177Q52M58 125 aa7.73□□□□□ -1.17
CLN6-223ENST00000637823 MUSTN1Q8IVN3 82 aa7.73□□□□□ -1.17
CLN6-223ENST00000637823 ALMS1Q8TCU4 4167 aa7.73□□□□□ -1.17
CLN6-223ENST00000637823 LECT2O14960 151 aa7.72□□□□□ -1.17
CLN6-223ENST00000637823 RPL24P83731 157 aaKnown RBP7.72□□□□□ -1.17
CLN6-223ENST00000637823 BATFQ16520 125 aa7.72□□□□□ -1.17
CLN6-223ENST00000637823 RNF151Q2KHN1 245 aa7.72□□□□□ -1.17
CLN6-223ENST00000637823 C1orf134Q5TEV5 83 aa7.72□□□□□ -1.17
CLN6-223ENST00000637823 Q6ZRU5 148 aa7.72□□□□□ -1.17
CLN6-223ENST00000637823 PPDPFQ9H3Y8 114 aa7.72□□□□□ -1.17
CLN6-223ENST00000637823 C6orf48Q9UBA6 75 aa7.72□□□□□ -1.17
CLN6-223ENST00000637823 LRCOL1A6NCL2 159 aa7.71□□□□□ -1.18
CLN6-223ENST00000637823 FXYD2P54710 66 aa7.71□□□□□ -1.18
CLN6-223ENST00000637823 C9orf116Q5BN46 136 aaPredicted RBP7.71□□□□□ -1.18
CLN6-223ENST00000637823 MIR7-3HGQ8N6C7 128 aa7.71□□□□□ -1.18
CLN6-223ENST00000637823 DAND5Q8N907 189 aa7.71□□□□□ -1.18
CLN6-223ENST00000637823 LINC00308Q8TCZ7 52 aa7.71□□□□□ -1.18
CLN6-223ENST00000637823 TMEM238LA0A1B0GVL6 79 aa7.7□□□□□ -1.18
CLN6-223ENST00000637823 A6NDN8 102 aa7.7□□□□□ -1.18
CLN6-223ENST00000637823 A6NJY4 79 aa7.7□□□□□ -1.18
CLN6-223ENST00000637823 EREGO14944 169 aa7.7□□□□□ -1.18
CLN6-223ENST00000637823 WFDC2Q14508 124 aa7.7□□□□□ -1.18
CLN6-223ENST00000637823 SLPIP03973 132 aa7.69□□□□□ -1.18
CLN6-223ENST00000637823 LBHQ53QV2 105 aaPredicted RBP7.69□□□□□ -1.18
CLN6-223ENST00000637823 CARD19Q96LW7 228 aa7.69□□□□□ -1.18
CLN6-223ENST00000637823 PGPEP1Q9NXJ5 209 aa7.69□□□□□ -1.18
CLN6-223ENST00000637823 LOC107984156A0A0G2JMH3 177 aa7.68□□□□□ -1.18
CLN6-223ENST00000637823 NPC2P61916 151 aa7.68□□□□□ -1.18
CLN6-223ENST00000637823 COL5A1-AS1Q5SY13 56 aa7.68□□□□□ -1.18
CLN6-223ENST00000637823 ARL17AQ8IVW1 177 aa7.68□□□□□ -1.18
CLN6-223ENST00000637823 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.67□□□□□ -1.18
CLN6-223ENST00000637823 A4D1N5 150 aa7.67□□□□□ -1.18
CLN6-223ENST00000637823 EIF4EBP3O60516 100 aaPredicted RBP7.67□□□□□ -1.18
CLN6-223ENST00000637823 CNBPP62633 177 aaKnown RBP7.67□□□□□ -1.18
CLN6-223ENST00000637823 SOSTDC1Q6X4U4 206 aa7.67□□□□□ -1.18
CLN6-223ENST00000637823 A0A1B0GWB2 263 aa7.66□□□□□ -1.18
CLN6-223ENST00000637823 NDUFC2-KCTD14E9PQ53 114 aa7.66□□□□□ -1.18
CLN6-223ENST00000637823 TLX1NBP0CAT3 122 aa7.66□□□□□ -1.18
CLN6-223ENST00000637823 SND1-IT1Q9HBX3 110 aa7.66□□□□□ -1.18
CLN6-223ENST00000637823 NHP2Q9NX24 153 aaKnown RBP7.66□□□□□ -1.18
CLN6-223ENST00000637823 A0A087WTM6 91 aa7.65□□□□□ -1.18
CLN6-223ENST00000637823 LCE6AA0A183 80 aa7.65□□□□□ -1.18
CLN6-223ENST00000637823 CFC1BP0CG36 223 aa7.65□□□□□ -1.18
CLN6-223ENST00000637823 CFC1P0CG37 223 aa7.65□□□□□ -1.18
CLN6-223ENST00000637823 Q8N814 137 aa7.64□□□□□ -1.19
CLN6-223ENST00000637823 KMT2AQ03164 3969 aa7.63□□□□□ -1.19
CLN6-223ENST00000637823 A0A0B4J2C4 111 aa7.63□□□□□ -1.19
CLN6-223ENST00000637823 LOC107984640A0A0U1RRK4 108 aa7.63□□□□□ -1.19
CLN6-223ENST00000637823 RAB37Q96AX2 223 aa7.63□□□□□ -1.19
CLN6-223ENST00000637823 DNAH10Q8IVF4 4471 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms