RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 C2orf48Q96LS8 159 aa13.87□□□□□ -0.19
CACNA1A-246ENST00000637736 Q6JHZ5 121 aa13.86□□□□□ -0.19
CACNA1A-246ENST00000637736 IGKV2D-30A0A075B6S6 120 aa13.86□□□□□ -0.19
CACNA1A-246ENST00000637736 IGKV2-30P06310 120 aa13.86□□□□□ -0.19
CACNA1A-246ENST00000637736 C9orf116Q5BN46 136 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-246ENST00000637736 Q8N814 137 aa13.85□□□□□ -0.19
CACNA1A-246ENST00000637736 LIMD2Q9BT23 127 aa13.84□□□□□ -0.19
CACNA1A-246ENST00000637736 ANKRD17O75179 2603 aaKnown RBP13.84□□□□□ -0.19
CACNA1A-246ENST00000637736 CDC42SE2Q9NRR3 84 aa13.83□□□□□ -0.2
CACNA1A-246ENST00000637736 UNQ6190/PRO20217Q6UXQ8 127 aa13.83□□□□□ -0.2
CACNA1A-246ENST00000637736 F8WDY8 70 aa13.83□□□□□ -0.2
CACNA1A-246ENST00000637736 SERTAD4-AS1Q5TG53 156 aa13.83□□□□□ -0.2
CACNA1A-246ENST00000637736 LINC00575Q6W349 94 aa13.82□□□□□ -0.2
CACNA1A-246ENST00000637736 ABCA12Q86UK0 2595 aa13.82□□□□□ -0.2
CACNA1A-246ENST00000637736 CHCHD7Q9BUK0 85 aa13.82□□□□□ -0.2
CACNA1A-246ENST00000637736 TRBV10-3A0A0K0K1G6 114 aa13.82□□□□□ -0.2
CACNA1A-246ENST00000637736 EGFEM1PQ0D2K5 195 aa13.81□□□□□ -0.2
CACNA1A-246ENST00000637736 HCG22E2RYF7 251 aa13.81□□□□□ -0.2
CACNA1A-246ENST00000637736 PRR3P79522 188 aaKnown RBP13.8□□□□□ -0.2
CACNA1A-246ENST00000637736 Q6ZS46 218 aa13.8□□□□□ -0.2
CACNA1A-246ENST00000637736 SPAG11AQ6PDA7 123 aa13.8□□□□□ -0.2
CACNA1A-246ENST00000637736 hDV103S1A0JD37 113 aa13.79□□□□□ -0.2
CACNA1A-246ENST00000637736 CRIP2P52943 208 aaPredicted RBP13.79□□□□□ -0.2
CACNA1A-246ENST00000637736 C1orf134Q5TEV5 83 aa13.79□□□□□ -0.2
CACNA1A-246ENST00000637736 BRWD1-AS2P59051 145 aa13.79□□□□□ -0.2
CACNA1A-246ENST00000637736 IGLV1-40P01703 118 aa13.79□□□□□ -0.2
CACNA1A-246ENST00000637736 ACANP16112 2415 aa13.78□□□□□ -0.2
CACNA1A-246ENST00000637736 F8P00451 2351 aa13.78□□□□□ -0.2
CACNA1A-246ENST00000637736 PIEZO1Q92508 2521 aa13.77□□□□□ -0.2
CACNA1A-246ENST00000637736 TLN1Q9Y490 2541 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-246ENST00000637736 POLR2KP53803 58 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-246ENST00000637736 C1orf229Q6ZS94 237 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-246ENST00000637736 A0A087WSZ3 146 aa13.75□□□□□ -0.21
CACNA1A-246ENST00000637736 A0A1B0GU69 56 aa13.75□□□□□ -0.21
CACNA1A-246ENST00000637736 WISP2O76076 250 aa13.75□□□□□ -0.21
CACNA1A-246ENST00000637736 Q8N6K4 173 aa13.75□□□□□ -0.21
CACNA1A-246ENST00000637736 CNFNQ9BYD5 112 aa13.75□□□□□ -0.21
CACNA1A-246ENST00000637736 BRI3O95415 125 aa13.75□□□□□ -0.21
CACNA1A-246ENST00000637736 Q8N3U1 123 aa13.74□□□□□ -0.21
CACNA1A-246ENST00000637736 C2orf91Q6ZV80 131 aa13.74□□□□□ -0.21
CACNA1A-246ENST00000637736 A0A087WYN8 130 aa13.73□□□□□ -0.21
CACNA1A-246ENST00000637736 COX6A2Q02221 97 aa13.73□□□□□ -0.21
CACNA1A-246ENST00000637736 SPINT4Q6UDR6 99 aa13.73□□□□□ -0.21
CACNA1A-246ENST00000637736 ZNF295-AS1Q8N0V1 137 aa13.72□□□□□ -0.21
CACNA1A-246ENST00000637736 IGF2RP11717 2491 aa13.72□□□□□ -0.21
CACNA1A-246ENST00000637736 PRR9Q5T870 116 aa13.71□□□□□ -0.21
CACNA1A-246ENST00000637736 PCSK5Q92824 1860 aa13.71□□□□□ -0.21
CACNA1A-246ENST00000637736 XGP55808 180 aa13.71□□□□□ -0.21
CACNA1A-246ENST00000637736 Q9UF83 564 aa13.69□□□□□ -0.22
CACNA1A-246ENST00000637736 Q6ZPA2 131 aa13.69□□□□□ -0.22
CACNA1A-246ENST00000637736 A0A087WVE0 104 aa13.68□□□□□ -0.22
CACNA1A-246ENST00000637736 C1orf64Q8NEQ6 169 aa13.68□□□□□ -0.22
CACNA1A-246ENST00000637736 JMJD1CQ15652 2540 aa13.68□□□□□ -0.22
CACNA1A-246ENST00000637736 SPACA4Q8TDM5 124 aa13.68□□□□□ -0.22
CACNA1A-246ENST00000637736 Q6ZTC4 211 aa13.67□□□□□ -0.22
CACNA1A-246ENST00000637736 SMR3AQ99954 134 aa13.67□□□□□ -0.22
CACNA1A-246ENST00000637736 IGIPA6NJ69 53 aa13.66□□□□□ -0.22
CACNA1A-246ENST00000637736 SETD2Q9BYW2 2564 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-246ENST00000637736 LINC00242Q5T6M2 205 aa13.64□□□□□ -0.23
CACNA1A-246ENST00000637736 ACYP2P14621 99 aa13.64□□□□□ -0.23
CACNA1A-246ENST00000637736 SMIM1B2RUZ4 78 aa13.63□□□□□ -0.23
CACNA1A-246ENST00000637736 VPREB1P12018 145 aa13.62□□□□□ -0.23
CACNA1A-246ENST00000637736 IGLV1-51P01701 117 aa13.61□□□□□ -0.23
CACNA1A-246ENST00000637736 C11orf21Q9P2W6 132 aa13.61□□□□□ -0.23
CACNA1A-246ENST00000637736 IGLV4-60A0A075B6I1 120 aa13.6□□□□□ -0.23
CACNA1A-246ENST00000637736 A0A1B0GUV1 79 aa13.6□□□□□ -0.23
CACNA1A-246ENST00000637736 IGLV8-61A0A075B6I0 122 aa13.6□□□□□ -0.23
CACNA1A-246ENST00000637736 NHLRC4P0CG21 123 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-246ENST00000637736 YPEL4Q96NS1 127 aa13.59□□□□□ -0.23
CACNA1A-246ENST00000637736 A8MTW9 85 aa13.58□□□□□ -0.24
CACNA1A-246ENST00000637736 GAS8-AS1O95177 125 aa13.58□□□□□ -0.24
CACNA1A-246ENST00000637736 LINC01561Q8N1V8 128 aa13.58□□□□□ -0.24
CACNA1A-246ENST00000637736 CRIP3Q6Q6R5 217 aa13.57□□□□□ -0.24
CACNA1A-246ENST00000637736 TMEM254Q8TBM7 123 aa13.57□□□□□ -0.24
CACNA1A-246ENST00000637736 FHL2Q14192 279 aa13.56□□□□□ -0.24
CACNA1A-246ENST00000637736 MOBPQ13875 183 aa13.55□□□□□ -0.24
CACNA1A-246ENST00000637736 ODF3L2Q3SX64 289 aa13.55□□□□□ -0.24
CACNA1A-246ENST00000637736 Q8N2B8 174 aa13.54□□□□□ -0.24
CACNA1A-246ENST00000637736 C16orf95Q9H693 158 aa13.54□□□□□ -0.24
CACNA1A-246ENST00000637736 C6orf48Q9UBA6 75 aa13.54□□□□□ -0.24
CACNA1A-246ENST00000637736 NCOR2Q9Y618 2525 aa13.54□□□□□ -0.24
CACNA1A-246ENST00000637736 CXCL6P80162 114 aa13.54□□□□□ -0.24
CACNA1A-246ENST00000637736 SMCR5Q8TEV8 140 aa13.53□□□□□ -0.24
CACNA1A-246ENST00000637736 FAM229AH3BQW9 127 aa13.53□□□□□ -0.24
CACNA1A-246ENST00000637736 PKD1L2Q7Z442 2459 aa13.52□□□□□ -0.25
CACNA1A-246ENST00000637736 ANKRD11Q6UB99 2663 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-246ENST00000637736 EDN2P20800 178 aa13.51□□□□□ -0.25
CACNA1A-246ENST00000637736 AMELXQ99217 191 aa13.5□□□□□ -0.25
CACNA1A-246ENST00000637736 ATP11AUNQ6ZP68 121 aa13.5□□□□□ -0.25
CACNA1A-246ENST00000637736 TP53AIP1Q9HCN2 124 aa13.5□□□□□ -0.25
CACNA1A-246ENST00000637736 USP9XQ93008 2570 aaPredicted RBP13.49□□□□□ -0.25
CACNA1A-246ENST00000637736 LYPD5Q6UWN5 251 aa13.49□□□□□ -0.25
CACNA1A-246ENST00000637736 SMIM29Q86T20 159 aa13.49□□□□□ -0.25
CACNA1A-246ENST00000637736 C22orf24Q9Y442 160 aa13.48□□□□□ -0.25
CACNA1A-246ENST00000637736 LINC00313P59037 77 aa13.48□□□□□ -0.25
CACNA1A-246ENST00000637736 ADAMTSL4-AS1Q5T5F5 129 aa13.47□□□□□ -0.25
CACNA1A-246ENST00000637736 Q6ZRU5 148 aa13.47□□□□□ -0.25
CACNA1A-246ENST00000637736 SSBP3-AS1Q7Z2R9 100 aa13.46□□□□□ -0.26
CACNA1A-246ENST00000637736 ZNF580Q9UK33 172 aa13.45□□□□□ -0.26
CACNA1A-246ENST00000637736 C8orf87E5RJ46 101 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms