RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 LINC00242Q5T6M2 205 aa12.54□□□□□ -0.4
CACNA1A-215ENST00000635727 PSMG3-AS1Q96PY0 264 aa12.54□□□□□ -0.4
CACNA1A-215ENST00000635727 MOBPQ13875 183 aa12.54□□□□□ -0.4
CACNA1A-215ENST00000635727 Q8IZM0 81 aa12.53□□□□□ -0.4
CACNA1A-215ENST00000635727 TRAV7A0A075B6U4 112 aa12.53□□□□□ -0.4
CACNA1A-215ENST00000635727 SMIM26A0A096LP01 95 aa12.53□□□□□ -0.4
CACNA1A-215ENST00000635727 FSTL3O95633 263 aa12.52□□□□□ -0.4
CACNA1A-215ENST00000635727 Q8N3U1 123 aa12.52□□□□□ -0.4
CACNA1A-215ENST00000635727 C11orf21Q9P2W6 132 aa12.52□□□□□ -0.41
CACNA1A-215ENST00000635727 C1orf64Q8NEQ6 169 aa12.51□□□□□ -0.41
CACNA1A-215ENST00000635727 ACYP2P14621 99 aa12.51□□□□□ -0.41
CACNA1A-215ENST00000635727 MRPS36P82909 103 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-215ENST00000635727 ZNF580Q9UK33 172 aa12.51□□□□□ -0.41
CACNA1A-215ENST00000635727 CPAMD8Q8IZJ3 1885 aa12.5□□□□□ -0.41
CACNA1A-215ENST00000635727 KRTAP10-9P60411 292 aa12.5□□□□□ -0.41
CACNA1A-215ENST00000635727 LIMD2Q9BT23 127 aa12.49□□□□□ -0.41
CACNA1A-215ENST00000635727 SSBP3-AS1Q7Z2R9 100 aa12.48□□□□□ -0.41
CACNA1A-215ENST00000635727 J3QL48 77 aa12.47□□□□□ -0.41
CACNA1A-215ENST00000635727 BRWD1-AS2P59051 145 aa12.47□□□□□ -0.41
CACNA1A-215ENST00000635727 CDSNQ15517 529 aa12.46□□□□□ -0.42
CACNA1A-215ENST00000635727 Q6JHZ5 121 aa12.46□□□□□ -0.42
CACNA1A-215ENST00000635727 DOPEY1Q5JWR5 2465 aa12.45□□□□□ -0.42
CACNA1A-215ENST00000635727 FBXL19-AS1Q494R0 122 aa12.45□□□□□ -0.42
CACNA1A-215ENST00000635727 CUL9Q8IWT3 2517 aa12.45□□□□□ -0.42
CACNA1A-215ENST00000635727 SMCR5Q8TEV8 140 aa12.45□□□□□ -0.42
CACNA1A-215ENST00000635727 COX6B2Q6YFQ2 88 aa12.45□□□□□ -0.42
CACNA1A-215ENST00000635727 SMIM29Q86T20 159 aa12.45□□□□□ -0.42
CACNA1A-215ENST00000635727 C2orf91Q6ZV80 131 aa12.43□□□□□ -0.42
CACNA1A-215ENST00000635727 APLNQ9ULZ1 77 aa12.43□□□□□ -0.42
CACNA1A-215ENST00000635727 AVPP01185 164 aa12.43□□□□□ -0.42
CACNA1A-215ENST00000635727 C11orf71Q6IPW1 123 aa12.43□□□□□ -0.42
CACNA1A-215ENST00000635727 Q6ZRU5 148 aa12.43□□□□□ -0.42
CACNA1A-215ENST00000635727 COL4A4P53420 1690 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-215ENST00000635727 Q6ZSN1 163 aa12.41□□□□□ -0.42
CACNA1A-215ENST00000635727 MDFIQ99750 246 aa12.41□□□□□ -0.42
CACNA1A-215ENST00000635727 FAM229AH3BQW9 127 aa12.41□□□□□ -0.42
CACNA1A-215ENST00000635727 EGFEM1PQ0D2K5 195 aa12.41□□□□□ -0.42
CACNA1A-215ENST00000635727 ADAMTSL4-AS1Q5T5F5 129 aa12.41□□□□□ -0.42
CACNA1A-215ENST00000635727 FHL2Q14192 279 aa12.4□□□□□ -0.42
CACNA1A-215ENST00000635727 Q96NJ1 140 aa12.4□□□□□ -0.42
CACNA1A-215ENST00000635727 Q6ZPA2 131 aa12.4□□□□□ -0.43
CACNA1A-215ENST00000635727 C22orf24Q9Y442 160 aa12.39□□□□□ -0.43
CACNA1A-215ENST00000635727 IMUPQ9GZP8 106 aa12.39□□□□□ -0.43
CACNA1A-215ENST00000635727 KIAA0087Q14695 138 aa12.38□□□□□ -0.43
CACNA1A-215ENST00000635727 TMEM254Q8TBM7 123 aa12.38□□□□□ -0.43
CACNA1A-215ENST00000635727 RPL37AP61513 92 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-215ENST00000635727 LYPD5Q6UWN5 251 aa12.38□□□□□ -0.43
CACNA1A-215ENST00000635727 SMIM1B2RUZ4 78 aa12.37□□□□□ -0.43
CACNA1A-215ENST00000635727 C16orf90A8MZG2 172 aa12.37□□□□□ -0.43
CACNA1A-215ENST00000635727 TYMSOSQ8TAI1 123 aa12.37□□□□□ -0.43
CACNA1A-215ENST00000635727 TSPEAR-AS2P59090 65 aa12.37□□□□□ -0.43
CACNA1A-215ENST00000635727 C6orf48Q9UBA6 75 aa12.37□□□□□ -0.43
CACNA1A-215ENST00000635727 ATP11AUNQ6ZP68 121 aa12.36□□□□□ -0.43
CACNA1A-215ENST00000635727 CHCHD7Q9BUK0 85 aa12.35□□□□□ -0.43
CACNA1A-215ENST00000635727 KLLNB2CW77 178 aa12.35□□□□□ -0.43
CACNA1A-215ENST00000635727 PHF5AQ7RTV0 110 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-215ENST00000635727 C11orf1Q9H5F2 150 aa12.35□□□□□ -0.43
CACNA1A-215ENST00000635727 ODF3L2Q3SX64 289 aa12.34□□□□□ -0.43
CACNA1A-215ENST00000635727 LINC00313P59037 77 aa12.33□□□□□ -0.44
CACNA1A-215ENST00000635727 CCDC168Q8NDH2 2452 aa12.33□□□□□ -0.44
CACNA1A-215ENST00000635727 ZNF295-AS1Q8N0V1 137 aa12.32□□□□□ -0.44
CACNA1A-215ENST00000635727 POLR2KP53803 58 aaKnown RBP12.31□□□□□ -0.44
CACNA1A-215ENST00000635727 IGLV1-40P01703 118 aa12.3□□□□□ -0.44
CACNA1A-215ENST00000635727 P0C879 139 aa12.3□□□□□ -0.44
CACNA1A-215ENST00000635727 LINC01554Q52M75 96 aa12.3□□□□□ -0.44
CACNA1A-215ENST00000635727 C9orf92A6NGG3 77 aa12.29□□□□□ -0.44
CACNA1A-215ENST00000635727 IGIPA6NJ69 53 aa12.28□□□□□ -0.44
CACNA1A-215ENST00000635727 Q8N6K4 173 aa12.27□□□□□ -0.44
CACNA1A-215ENST00000635727 LINC00846Q9NV44 126 aa12.26□□□□□ -0.45
CACNA1A-215ENST00000635727 EIF4EBP1Q13541 118 aaPredicted RBP12.25□□□□□ -0.45
CACNA1A-215ENST00000635727 FHL3Q13643 280 aa12.25□□□□□ -0.45
CACNA1A-215ENST00000635727 C4orf26Q17RF5 130 aa12.24□□□□□ -0.45
CACNA1A-215ENST00000635727 MUC7Q8TAX7 377 aa12.22□□□□□ -0.45
CACNA1A-215ENST00000635727 BDP1A6H8Y1 2624 aa12.22□□□□□ -0.45
CACNA1A-215ENST00000635727 LINC00574Q9H8X3 128 aa12.22□□□□□ -0.45
CACNA1A-215ENST00000635727 IGLV1-51P01701 117 aa12.21□□□□□ -0.45
CACNA1A-215ENST00000635727 RTL8CO15255 209 aa12.2□□□□□ -0.46
CACNA1A-215ENST00000635727 IGLV6-57P01721 117 aa12.2□□□□□ -0.46
CACNA1A-215ENST00000635727 COL27A1Q8IZC6 1860 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-215ENST00000635727 LINC00167Q96N53 147 aa12.18□□□□□ -0.46
CACNA1A-215ENST00000635727 NOTCH2Q04721 2471 aa12.16□□□□□ -0.46
CACNA1A-215ENST00000635727 A0A0D9SG42 100 aa12.15□□□□□ -0.47
CACNA1A-215ENST00000635727 ST20-AS1Q8NBB2 130 aa12.14□□□□□ -0.47
CACNA1A-215ENST00000635727 SPATA3Q8NHX4 192 aa12.14□□□□□ -0.47
CACNA1A-215ENST00000635727 C8orf87E5RJ46 101 aa12.14□□□□□ -0.47
CACNA1A-215ENST00000635727 FAM19A4Q96LR4 140 aa12.14□□□□□ -0.47
CACNA1A-215ENST00000635727 LTBP2Q14767 1821 aa12.13□□□□□ -0.47
CACNA1A-215ENST00000635727 C9orf129Q5T035 196 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-215ENST00000635727 MYO9AB2RTY4 2548 aa12.12□□□□□ -0.47
CACNA1A-215ENST00000635727 CRIP3Q6Q6R5 217 aa12.11□□□□□ -0.47
CACNA1A-215ENST00000635727 SMR3BP02814 79 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-215ENST00000635727 NHLRC4P0CG21 123 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-215ENST00000635727 LINC00315P59091 139 aa12.1□□□□□ -0.47
CACNA1A-215ENST00000635727 Q8N2B8 174 aa12.09□□□□□ -0.47
CACNA1A-215ENST00000635727 EPM2AB3EWF7 344 aa12.09□□□□□ -0.47
CACNA1A-215ENST00000635727 LINC00476Q8WZB0 136 aa12.08□□□□□ -0.48
CACNA1A-215ENST00000635727 VPREB1P12018 145 aa12.08□□□□□ -0.48
CACNA1A-215ENST00000635727 CRIPTQ9P021 101 aa12.08□□□□□ -0.48
CACNA1A-215ENST00000635727 FAM168BA1KXE4 195 aa12.07□□□□□ -0.48
CACNA1A-215ENST00000635727 LINC01600Q96MT4 127 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms