RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 TRBV10-3A0A0K0K1G6 114 aa8.46□□□□□ -1.06
SHPRH-211ENST00000629427 EGFEM1PQ0D2K5 195 aa8.46□□□□□ -1.06
SHPRH-211ENST00000629427 IGLV4-60A0A075B6I1 120 aa8.45□□□□□ -1.06
SHPRH-211ENST00000629427 NAV2Q8IVL1 2488 aa8.45□□□□□ -1.06
SHPRH-211ENST00000629427 C2orf91Q6ZV80 131 aa8.45□□□□□ -1.06
SHPRH-211ENST00000629427 IMUPQ9GZP8 106 aa8.45□□□□□ -1.06
SHPRH-211ENST00000629427 Q8N814 137 aa8.45□□□□□ -1.06
SHPRH-211ENST00000629427 LINC00242Q5T6M2 205 aa8.44□□□□□ -1.06
SHPRH-211ENST00000629427 FHL2Q14192 279 aa8.44□□□□□ -1.06
SHPRH-211ENST00000629427 NTM-AS1Q6ZSK4 140 aa8.44□□□□□ -1.06
SHPRH-211ENST00000629427 IGIPA6NJ69 53 aa8.43□□□□□ -1.06
SHPRH-211ENST00000629427 Q9BRP9 147 aa8.43□□□□□ -1.06
SHPRH-211ENST00000629427 LINC00208Q96KT6 92 aa8.43□□□□□ -1.06
SHPRH-211ENST00000629427 LINC00694P0DN24 101 aa8.42□□□□□ -1.06
SHPRH-211ENST00000629427 LINC01547P58512 204 aaPredicted RBP8.42□□□□□ -1.06
SHPRH-211ENST00000629427 TRBV7-6A0A0J9YX20 115 aa8.42□□□□□ -1.06
SHPRH-211ENST00000629427 C16orf95Q9H693 158 aa8.42□□□□□ -1.06
SHPRH-211ENST00000629427 CHCHD7Q9BUK0 85 aa8.42□□□□□ -1.06
SHPRH-211ENST00000629427 IGF2RP11717 2491 aa8.41□□□□□ -1.06
SHPRH-211ENST00000629427 SMIM1B2RUZ4 78 aa8.41□□□□□ -1.06
SHPRH-211ENST00000629427 CNFNQ9BYD5 112 aa8.4□□□□□ -1.06
SHPRH-211ENST00000629427 DEFB116Q30KQ4 102 aa8.4□□□□□ -1.06
SHPRH-211ENST00000629427 A0A087WYN8 130 aa8.4□□□□□ -1.07
SHPRH-211ENST00000629427 COX7CP15954 63 aa8.4□□□□□ -1.07
SHPRH-211ENST00000629427 SPINK1P00995 79 aa8.39□□□□□ -1.07
SHPRH-211ENST00000629427 Q6Q795 121 aa8.39□□□□□ -1.07
SHPRH-211ENST00000629427 SBSPONQ8IVN8 264 aa8.39□□□□□ -1.07
SHPRH-211ENST00000629427 YPEL4Q96NS1 127 aa8.39□□□□□ -1.07
SHPRH-211ENST00000629427 C2orf48Q96LS8 159 aa8.38□□□□□ -1.07
SHPRH-211ENST00000629427 MYO9AB2RTY4 2548 aa8.38□□□□□ -1.07
SHPRH-211ENST00000629427 LYPD5Q6UWN5 251 aa8.38□□□□□ -1.07
SHPRH-211ENST00000629427 LINC00575Q6W349 94 aa8.37□□□□□ -1.07
SHPRH-211ENST00000629427 PCOTHQ58A44 107 aa8.37□□□□□ -1.07
SHPRH-211ENST00000629427 Q6JHZ5 121 aa8.37□□□□□ -1.07
SHPRH-211ENST00000629427 TRAV7A0A075B6U4 112 aa8.37□□□□□ -1.07
SHPRH-211ENST00000629427 CCDC179H3BU77 68 aa8.37□□□□□ -1.07
SHPRH-211ENST00000629427 NHLRC4P0CG21 123 aaPredicted RBP8.36□□□□□ -1.07
SHPRH-211ENST00000629427 Q6ZSN1 163 aa8.35□□□□□ -1.07
SHPRH-211ENST00000629427 PRLHP81277 87 aa8.35□□□□□ -1.07
SHPRH-211ENST00000629427 LINC00337Q8N6G1 96 aa8.34□□□□□ -1.07
SHPRH-211ENST00000629427 A0A087WSZ3 146 aa8.34□□□□□ -1.07
SHPRH-211ENST00000629427 H0Y9P7 68 aa8.34□□□□□ -1.07
SHPRH-211ENST00000629427 CSDC2Q9Y534 153 aaKnown RBP8.34□□□□□ -1.07
SHPRH-211ENST00000629427 F8WDY8 70 aa8.34□□□□□ -1.07
SHPRH-211ENST00000629427 LIMD2Q9BT23 127 aa8.34□□□□□ -1.07
SHPRH-211ENST00000629427 A8MTW9 85 aa8.33□□□□□ -1.08
SHPRH-211ENST00000629427 FHL3Q13643 280 aa8.33□□□□□ -1.08
SHPRH-211ENST00000629427 GOLGB1Q14789 3259 aaKnown RBP8.33□□□□□ -1.08
SHPRH-211ENST00000629427 ADAMTSL4-AS1Q5T5F5 129 aa8.33□□□□□ -1.08
SHPRH-211ENST00000629427 TLN2Q9Y4G6 2542 aa8.32□□□□□ -1.08
SHPRH-211ENST00000629427 A0A1B0GUV1 79 aa8.32□□□□□ -1.08
SHPRH-211ENST00000629427 TSPEAR-AS2P59090 65 aa8.32□□□□□ -1.08
SHPRH-211ENST00000629427 SOSTDC1Q6X4U4 206 aa8.32□□□□□ -1.08
SHPRH-211ENST00000629427 PCSK5Q92824 1860 aa8.32□□□□□ -1.08
SHPRH-211ENST00000629427 ABCA12Q86UK0 2595 aa8.32□□□□□ -1.08
SHPRH-211ENST00000629427 A0A1W2PPR1 153 aa8.32□□□□□ -1.08
SHPRH-211ENST00000629427 Q6ZRU5 148 aa8.32□□□□□ -1.08
SHPRH-211ENST00000629427 CENPFP49454 3210 aa8.32□□□□□ -1.08
SHPRH-211ENST00000629427 XGP55808 180 aa8.32□□□□□ -1.08
SHPRH-211ENST00000629427 ZNF580Q9UK33 172 aa8.31□□□□□ -1.08
SHPRH-211ENST00000629427 JMJD1CQ15652 2540 aa8.31□□□□□ -1.08
SHPRH-211ENST00000629427 AMELXQ99217 191 aa8.3□□□□□ -1.08
SHPRH-211ENST00000629427 PIEZO1Q92508 2521 aa8.3□□□□□ -1.08
SHPRH-211ENST00000629427 HCG22E2RYF7 251 aa8.3□□□□□ -1.08
SHPRH-211ENST00000629427 BEAN1Q3B7T3 259 aa8.29□□□□□ -1.08
SHPRH-211ENST00000629427 Q8N3U1 123 aa8.29□□□□□ -1.08
SHPRH-211ENST00000629427 NCOR2Q9Y618 2525 aa8.29□□□□□ -1.08
SHPRH-211ENST00000629427 MDFIQ99750 246 aa8.29□□□□□ -1.08
SHPRH-211ENST00000629427 A0A087WVE0 104 aa8.29□□□□□ -1.08
SHPRH-211ENST00000629427 IGKV2D-30A0A075B6S6 120 aa8.28□□□□□ -1.08
SHPRH-211ENST00000629427 IGKV2-30P06310 120 aa8.28□□□□□ -1.08
SHPRH-211ENST00000629427 C22orf24Q9Y442 160 aa8.28□□□□□ -1.08
SHPRH-211ENST00000629427 TRBV7-7A0A0K0K1E9 115 aa8.28□□□□□ -1.08
SHPRH-211ENST00000629427 SMIM26A0A096LP01 95 aa8.28□□□□□ -1.08
SHPRH-211ENST00000629427 TLN1Q9Y490 2541 aaKnown RBP8.28□□□□□ -1.08
SHPRH-211ENST00000629427 PMAIP1Q13794 54 aa8.28□□□□□ -1.08
SHPRH-211ENST00000629427 SMCR5Q8TEV8 140 aa8.28□□□□□ -1.08
SHPRH-211ENST00000629427 SPACA4Q8TDM5 124 aa8.27□□□□□ -1.09
SHPRH-211ENST00000629427 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
SHPRH-211ENST00000629427 C1orf195Q5TG92 126 aa8.26□□□□□ -1.09
SHPRH-211ENST00000629427 CRYGAP11844 174 aa8.26□□□□□ -1.09
SHPRH-211ENST00000629427 PSPHP1O15172 72 aa8.26□□□□□ -1.09
SHPRH-211ENST00000629427 URB1-AS1Q96HZ7 61 aa8.25□□□□□ -1.09
SHPRH-211ENST00000629427 LINC01561Q8N1V8 128 aa8.24□□□□□ -1.09
SHPRH-211ENST00000629427 ANKRD17O75179 2603 aaKnown RBP8.24□□□□□ -1.09
SHPRH-211ENST00000629427 MOBPQ13875 183 aa8.24□□□□□ -1.09
SHPRH-211ENST00000629427 Q8N2B8 174 aa8.23□□□□□ -1.09
SHPRH-211ENST00000629427 FAM229AH3BQW9 127 aa8.22□□□□□ -1.09
SHPRH-211ENST00000629427 KIAA0087Q14695 138 aa8.22□□□□□ -1.09
SHPRH-211ENST00000629427 C1orf64Q8NEQ6 169 aa8.2□□□□□ -1.1
SHPRH-211ENST00000629427 hDV103S1A0JD37 113 aa8.2□□□□□ -1.1
SHPRH-211ENST00000629427 COX8CQ7Z4L0 72 aa8.2□□□□□ -1.1
SHPRH-211ENST00000629427 LINC00310P59036 64 aa8.19□□□□□ -1.1
SHPRH-211ENST00000629427 Q9UF83 564 aa8.19□□□□□ -1.1
SHPRH-211ENST00000629427 CHTF8P0CG12 524 aa8.19□□□□□ -1.1
SHPRH-211ENST00000629427 C16orf90A8MZG2 172 aa8.17□□□□□ -1.1
SHPRH-211ENST00000629427 LINC00846Q9NV44 126 aa8.17□□□□□ -1.1
SHPRH-211ENST00000629427 SETD2Q9BYW2 2564 aaPredicted RBP8.17□□□□□ -1.1
SHPRH-211ENST00000629427 LINC00167Q96N53 147 aa8.16□□□□□ -1.1
SHPRH-211ENST00000629427 TYMSOSQ8TAI1 123 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms