RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 IGHV7-81A0A0B4J1V7 117 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV1-18A0A0C4DH31 117 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV4-28A0A0C4DH34 117 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 TRBV10-1A0A0K0K1A3 114 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 IGIPA6NJ69 53 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 B4DSR2 109 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 NCR3O14931 201 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 PSCAO43653 123 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 IGLV3-19P01714 112 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 BBC3Q96PG8 261 aaPredicted RBP2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 WFDC10AQ9H1F0 79 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 PDZD2O15018 2839 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 HUWE1Q7Z6Z7 4374 aaKnown RBP2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 GPR179Q6PRD1 2367 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV4-61A0A0C4DH41 118 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 I3L2K1 104 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 K7EQG2 157 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV4-59P01825 116 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 LINC00208Q96KT6 92 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 LINC00467Q9BRT7 94 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 VPS13BQ7Z7G8 4022 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV3OR16-10A0A075B7F0 116 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV3-49A0A0A0MS15 119 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV3-74A0A0B4J1X5 117 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 TRAV10A0A0B4J240 114 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 IGLV2-23P01705 113 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 MSMBP08118 114 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 TFF2Q03403 129 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 MIR22HGQ0VDD5 57 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 MOBPQ13875 183 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 C18orf65Q6ZTR6 163 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 C11orf21Q9P2W6 132 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 KMT2CQ8NEZ4 4911 aaKnown RBP2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 HIGD2AQ9BW72 106 aa2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 EP300Q09472 2414 aaPredicted RBP2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 PRRC2AP48634 2157 aaKnown RBP2.73□□□□□ -1.97
R3HDM1-220ENST00000628915 FBN3Q75N90 2809 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 OTOGQ6ZRI0 2925 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 PKDREJQ9NTG1 2253 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV7-4-1A0A0J9YVY3 117 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 RPL36AP83881 106 aaKnown RBP2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 RPL36ALQ969Q0 106 aaKnown RBP2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 LENEPQ9Y5L5 61 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV4OR15-8A0A075B7B6 117 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 A0A087WW49 117 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 LECT2O14960 151 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 PKHD1P08F94 4074 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 IGLV3-9A0A075B6K5 115 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 TSHBP01222 138 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 LHBP01229 141 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 RPL39LQ96EH5 51 aaKnown RBP2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 RNF5Q99942 180 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 KIF25-AS1Q9Y6Z4 181 aa2.72□□□□□ -1.97
R3HDM1-220ENST00000628915 FLG2Q5D862 2391 aaPredicted RBP2.71□□□□□ -1.97
R3HDM1-220ENST00000628915 C22orf34Q6ZV56 151 aa2.71□□□□□ -1.98
R3HDM1-220ENST00000628915 ADM2Q7Z4H4 148 aa2.71□□□□□ -1.98
R3HDM1-220ENST00000628915 PCNX1Q96RV3 2341 aa2.71□□□□□ -1.98
R3HDM1-220ENST00000628915 TRBV6-5A0A0K0K1A5 114 aa2.71□□□□□ -1.98
R3HDM1-220ENST00000628915 ZNF575Q86XF7 245 aa2.71□□□□□ -1.98
R3HDM1-220ENST00000628915 A8MU10 97 aa2.71□□□□□ -1.98
R3HDM1-220ENST00000628915 K7EIM0 57 aa2.71□□□□□ -1.98
R3HDM1-220ENST00000628915 LINC00242Q5T6M2 205 aa2.71□□□□□ -1.98
R3HDM1-220ENST00000628915 DHRS4-AS1Q9P1J3 65 aa2.71□□□□□ -1.98
R3HDM1-220ENST00000628915 DNAH9Q9NYC9 4486 aa2.71□□□□□ -1.98
R3HDM1-220ENST00000628915 PKHD1L1Q86WI1 4243 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 CLPSL1A2RUU4 121 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 IGKV3-15P01624 115 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 APELAP0DMC3 54 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 POLR2KP53803 58 aaKnown RBP2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 MIR7-3HGQ8N6C7 128 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 LITAFQ99732 161 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 F5P12259 2224 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 PDE6GP18545 87 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 ASB16-AS1Q495Z4 193 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 CSAG1Q6PB30 78 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 C8orf17Q9NRJ1 99 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 RP1L1Q8IWN7 2480 aaPredicted RBP2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 PINLYPA6NC86 204 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 Q6ZQT0 140 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 C9orf47Q6ZRZ4 202 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 DEFB108BQ8NET1 73 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 ZNF462Q96JM2 2506 aa2.7□□□□□ -1.98
R3HDM1-220ENST00000628915 PLA2G2AP14555 144 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 LINC01547P58512 204 aaPredicted RBP2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 RPL39P62891 51 aaKnown RBP2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 ODF3L2Q3SX64 289 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 NOTCH2NLQ7Z3S9 236 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 UBR5O95071 2799 aaPredicted RBP2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 IGHV3-35A0A0C4DH35 117 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 IGHV4-38-2P0DP08 117 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 SPINT4Q6UDR6 99 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 Q6ZTC4 211 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 ZNRD1Q9P1U0 126 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 IGHV3-38A0A0C4DH36 116 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 TRBV7-4A0A0J9YYF1 115 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 A6NDX4 124 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 A8MWP4 228 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 IGHV3-11P01762 117 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 Q8N9W7 124 aa2.69□□□□□ -1.98
R3HDM1-220ENST00000628915 TTTY12Q9BZ98 90 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms