RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 CARD19Q96LW7 228 aa8.05□□□□□ -1.12
LINC00963-216ENST00000623185 TRBV30A0A0K0K1B3 111 aa8.04□□□□□ -1.12
LINC00963-216ENST00000623185 HERVK_113P61574 105 aa8.04□□□□□ -1.12
LINC00963-216ENST00000623185 SFTA2Q6UW10 78 aa8.04□□□□□ -1.12
LINC00963-216ENST00000623185 C2orf82Q6UX34 121 aa8.04□□□□□ -1.12
LINC00963-216ENST00000623185 PKIGQ9Y2B9 76 aa8.04□□□□□ -1.12
LINC00963-216ENST00000623185 TMA7Q9Y2S6 64 aaKnown RBP8.04□□□□□ -1.12
LINC00963-216ENST00000623185 C10orf25Q5T742 122 aa8.03□□□□□ -1.12
LINC00963-216ENST00000623185 E9PLD3 99 aa8.02□□□□□ -1.13
LINC00963-216ENST00000623185 LEPROTO15243 131 aa8.02□□□□□ -1.13
LINC00963-216ENST00000623185 KRTAP10-1P60331 282 aa8.02□□□□□ -1.13
LINC00963-216ENST00000623185 PLEKHB2Q96CS7 222 aa8.02□□□□□ -1.13
LINC00963-216ENST00000623185 TLX1NBP0CAT3 122 aa8.01□□□□□ -1.13
LINC00963-216ENST00000623185 LINC01620Q4KN68 170 aa8.01□□□□□ -1.13
LINC00963-216ENST00000623185 STPG4Q8N801 248 aa8.01□□□□□ -1.13
LINC00963-216ENST00000623185 C6orf48Q9UBA6 75 aa8.01□□□□□ -1.13
LINC00963-216ENST00000623185 PKD1P98161 4303 aa8□□□□□ -1.13
LINC00963-216ENST00000623185 LOC107984640A0A0U1RRK4 108 aa8□□□□□ -1.13
LINC00963-216ENST00000623185 ZNF625Q96I27 306 aaPredicted RBP8□□□□□ -1.13
LINC00963-216ENST00000623185 J3QQQ9 107 aa7.99□□□□□ -1.13
LINC00963-216ENST00000623185 SCGB1D1O95968 90 aa7.99□□□□□ -1.13
LINC00963-216ENST00000623185 Q6ZSA8 131 aa7.99□□□□□ -1.13
LINC00963-216ENST00000623185 LINC00474Q9P2X8 69 aa7.99□□□□□ -1.13
LINC00963-216ENST00000623185 MYMXA0A1B0GTQ4 84 aa7.98□□□□□ -1.13
LINC00963-216ENST00000623185 LINC00587B1AMM8 73 aa7.98□□□□□ -1.13
LINC00963-216ENST00000623185 NDUFC2-KCTD14E9PQ53 114 aa7.98□□□□□ -1.13
LINC00963-216ENST00000623185 NMUP48645 174 aa7.98□□□□□ -1.13
LINC00963-216ENST00000623185 HERV-K104P63124 156 aa7.98□□□□□ -1.13
LINC00963-216ENST00000623185 CIRBPQ14011 172 aaKnown RBP7.98□□□□□ -1.13
LINC00963-216ENST00000623185 COX17Q14061 63 aa7.98□□□□□ -1.13
LINC00963-216ENST00000623185 JOSD1Q15040 202 aaPredicted RBP7.98□□□□□ -1.13
LINC00963-216ENST00000623185 DNAH11Q96DT5 4516 aa7.98□□□□□ -1.13
LINC00963-216ENST00000623185 LGALS3P17931 250 aaKnown RBP7.97□□□□□ -1.13
LINC00963-216ENST00000623185 C9orf116Q5BN46 136 aaPredicted RBP7.97□□□□□ -1.13
LINC00963-216ENST00000623185 ATOH7Q8N100 152 aa7.97□□□□□ -1.13
LINC00963-216ENST00000623185 FAM30AQ9NZY2 134 aa7.97□□□□□ -1.13
LINC00963-216ENST00000623185 NDUFA12Q9UI09 145 aa7.97□□□□□ -1.13
LINC00963-216ENST00000623185 PTTG1IPP53801 180 aa7.96□□□□□ -1.14
LINC00963-216ENST00000623185 Q6ZRP5 223 aa7.96□□□□□ -1.14
LINC00963-216ENST00000623185 HSBP1L1C9JCN9 74 aa7.95□□□□□ -1.14
LINC00963-216ENST00000623185 TSPEAR-AS2P59090 65 aa7.95□□□□□ -1.14
LINC00963-216ENST00000623185 GAGE2BQ13066 116 aa7.95□□□□□ -1.14
LINC00963-216ENST00000623185 DPH3Q96FX2 82 aa7.95□□□□□ -1.14
LINC00963-216ENST00000623185 A0A096LNI7 61 aa7.94□□□□□ -1.14
LINC00963-216ENST00000623185 IGKV2D-26A0A0A0MRZ7 120 aa7.94□□□□□ -1.14
LINC00963-216ENST00000623185 CDK2AP2O75956 126 aa7.94□□□□□ -1.14
LINC00963-216ENST00000623185 ERG28Q9UKR5 140 aa7.94□□□□□ -1.14
LINC00963-216ENST00000623185 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
LINC00963-216ENST00000623185 XGP55808 180 aa7.93□□□□□ -1.14
LINC00963-216ENST00000623185 RPL18AQ02543 176 aaKnown RBP7.93□□□□□ -1.14
LINC00963-216ENST00000623185 ANKRD39Q53RE8 183 aa7.93□□□□□ -1.14
LINC00963-216ENST00000623185 SPACA4Q8TDM5 124 aa7.93□□□□□ -1.14
LINC00963-216ENST00000623185 IGKV2-24A0A0C4DH68 120 aa7.92□□□□□ -1.14
LINC00963-216ENST00000623185 EPM2AB3EWF7 344 aa7.92□□□□□ -1.14
LINC00963-216ENST00000623185 PANO1I0J062 215 aa7.92□□□□□ -1.14
LINC00963-216ENST00000623185 PFN2P35080 140 aa7.92□□□□□ -1.14
LINC00963-216ENST00000623185 MAJINQ3KP22 176 aa7.92□□□□□ -1.14
LINC00963-216ENST00000623185 GAGE2EQ4V326 116 aa7.92□□□□□ -1.14
LINC00963-216ENST00000623185 GAGE2DQ9UEU5 116 aa7.92□□□□□ -1.14
LINC00963-216ENST00000623185 CHTF8P0CG12 524 aa7.91□□□□□ -1.14
LINC00963-216ENST00000623185 LINC00158P58513 81 aa7.91□□□□□ -1.14
LINC00963-216ENST00000623185 HECTD4Q9Y4D8 3996 aa7.91□□□□□ -1.14
LINC00963-216ENST00000623185 A0A087WYN8 130 aa7.9□□□□□ -1.14
LINC00963-216ENST00000623185 A0A0J9YXY3 114 aa7.9□□□□□ -1.14
LINC00963-216ENST00000623185 PYY3Q5JQD4 70 aa7.9□□□□□ -1.14
LINC00963-216ENST00000623185 MEIG1Q5JSS6 88 aa7.9□□□□□ -1.14
LINC00963-216ENST00000623185 CIRBP-AS1Q8TBR5 109 aa7.9□□□□□ -1.14
LINC00963-216ENST00000623185 PLAC8Q9NZF1 115 aa7.9□□□□□ -1.14
LINC00963-216ENST00000623185 EPPK1P58107 5090 aaKnown RBP7.89□□□□□ -1.15
LINC00963-216ENST00000623185 ZNF815PA8K554 130 aa7.89□□□□□ -1.15
LINC00963-216ENST00000623185 SMIM13P0DJ93 91 aa7.89□□□□□ -1.15
LINC00963-216ENST00000623185 C9orf129Q5T035 196 aaKnown RBP7.89□□□□□ -1.15
LINC00963-216ENST00000623185 TIMM17BO60830 172 aa7.88□□□□□ -1.15
LINC00963-216ENST00000623185 SCXQ7RTU7 201 aa7.88□□□□□ -1.15
LINC00963-216ENST00000623185 PCP2Q8IVA1 136 aa7.88□□□□□ -1.15
LINC00963-216ENST00000623185 TTTY13Q9BZ97 58 aa7.88□□□□□ -1.15
LINC00963-216ENST00000623185 SND1-IT1Q9HBX3 110 aa7.88□□□□□ -1.15
LINC00963-216ENST00000623185 PLA2G2DQ9UNK4 145 aa7.88□□□□□ -1.15
LINC00963-216ENST00000623185 PKHD1P08F94 4074 aa7.88□□□□□ -1.15
LINC00963-216ENST00000623185 DNAH5Q8TE73 4624 aa7.87□□□□□ -1.15
LINC00963-216ENST00000623185 LOC107984156A0A0G2JMH3 177 aa7.87□□□□□ -1.15
LINC00963-216ENST00000623185 A0A1W2PNN7 141 aa7.87□□□□□ -1.15
LINC00963-216ENST00000623185 ARL17AQ8IVW1 177 aa7.87□□□□□ -1.15
LINC00963-216ENST00000623185 VAMP8Q9BV40 100 aa7.87□□□□□ -1.15
LINC00963-216ENST00000623185 XAGE1AQ9HD64 81 aa7.87□□□□□ -1.15
LINC00963-216ENST00000623185 A0A0U1RRA0 63 aa7.86□□□□□ -1.15
LINC00963-216ENST00000623185 MIR7-3HGQ8N6C7 128 aa7.86□□□□□ -1.15
LINC00963-216ENST00000623185 DYNC1H1Q14204 4646 aaKnown RBP7.85□□□□□ -1.15
LINC00963-216ENST00000623185 DLEU1O43261 78 aa7.85□□□□□ -1.15
LINC00963-216ENST00000623185 COX8AP10176 69 aa7.85□□□□□ -1.15
LINC00963-216ENST00000623185 ADAMTSL4-AS1Q5T5F5 129 aa7.85□□□□□ -1.15
LINC00963-216ENST00000623185 BOD1L2Q8IYS8 172 aa7.85□□□□□ -1.15
LINC00963-216ENST00000623185 LRP1BQ9NZR2 4599 aa7.85□□□□□ -1.15
LINC00963-216ENST00000623185 LOC105371267A0A1B0GV96 52 aa7.84□□□□□ -1.15
LINC00963-216ENST00000623185 SPATA45Q537H7 98 aa7.84□□□□□ -1.15
LINC00963-216ENST00000623185 SCGB1D4Q6XE38 83 aa7.84□□□□□ -1.15
LINC00963-216ENST00000623185 KRTAP7-1Q8IUC3 87 aa7.84□□□□□ -1.15
LINC00963-216ENST00000623185 LITAFQ99732 161 aa7.84□□□□□ -1.15
LINC00963-216ENST00000623185 PAM16Q9Y3D7 125 aa7.84□□□□□ -1.15
LINC00963-216ENST00000623185 FAM168BA1KXE4 195 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms