RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 BAALCQ8WXS3 180 aa3.26□□□□□ -1.89
RPRD1B-209ENST00000622494 IFI27L1Q96BM0 104 aa3.26□□□□□ -1.89
RPRD1B-209ENST00000622494 AMELXQ99217 191 aa3.26□□□□□ -1.89
RPRD1B-209ENST00000622494 HIST1H2BLQ99880 126 aa3.26□□□□□ -1.89
RPRD1B-209ENST00000622494 VCX2Q9H322 139 aa3.26□□□□□ -1.89
RPRD1B-209ENST00000622494 CST9LQ9H4G1 147 aa3.26□□□□□ -1.89
RPRD1B-209ENST00000622494 PRR34Q9NV39 138 aa3.26□□□□□ -1.89
RPRD1B-209ENST00000622494 CHTOPQ9Y3Y2 248 aaKnown RBP3.26□□□□□ -1.89
RPRD1B-209ENST00000622494 IGKV3OR2-268A0A0C4DH90 116 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 LINC00959A0A1B0GUT2 108 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 hDV102S1A0JD36 115 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 K7EP13 123 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 C3orf79P0CE67 100 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 S100A2P29034 98 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 COX6A2Q02221 97 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 REG3AQ06141 175 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 PMVKQ15126 192 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 Q5VSD8 79 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 KRTAP26-1Q6PEX3 210 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 Q6ZN92 141 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 TEX43Q6ZNM6 134 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 HSPB8Q9UJY1 196 aa3.25□□□□□ -1.89
RPRD1B-209ENST00000622494 TRAV13-1A0A0B4J241 112 aa3.24□□□□□ -1.89
RPRD1B-209ENST00000622494 TRAV12-1A0A0B4J245 112 aa3.24□□□□□ -1.89
RPRD1B-209ENST00000622494 A0A0J9YXV3 536 aa3.24□□□□□ -1.89
RPRD1B-209ENST00000622494 SYS1-DBNDD2H3BUS1 97 aa3.24□□□□□ -1.89
RPRD1B-209ENST00000622494 PANO1I0J062 215 aa3.24□□□□□ -1.89
RPRD1B-209ENST00000622494 UBE2D1P51668 147 aa3.24□□□□□ -1.89
RPRD1B-209ENST00000622494 SEC61BP60468 96 aaKnown RBP3.24□□□□□ -1.89
RPRD1B-209ENST00000622494 LINC00242Q5T6M2 205 aa3.24□□□□□ -1.89
RPRD1B-209ENST00000622494 FAM19A3Q7Z5A8 133 aa3.24□□□□□ -1.89
RPRD1B-209ENST00000622494 Q8N814 137 aa3.24□□□□□ -1.89
RPRD1B-209ENST00000622494 UBE2WQ96B02 151 aa3.24□□□□□ -1.89
RPRD1B-209ENST00000622494 MAP1LC3CQ9BXW4 147 aa3.24□□□□□ -1.89
RPRD1B-209ENST00000622494 IGLV4-69A0A075B6H9 119 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 IGLV10-54A0A075B6I4 117 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 TRAV8-3A0A0A6YYJ7 113 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 TRAV8-4A0A0B4J246 113 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 LOC105371267A0A1B0GV96 52 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 TINCRA0A1B0GVN0 87 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 H0Y8G0 127 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 CCL25O15444 150 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 PSCAO43653 123 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 KRTDAPP60985 99 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 SS18Q15532 418 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 MIAQ16674 131 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 C10orf126Q8N4M7 172 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 OR10D4PQ8NGN7 298 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 CHCHD10Q8WYQ3 142 aaPredicted RBP3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 PMCHL2Q9BQD1 86 aa3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 MRPL35Q9NZE8 188 aaKnown RBP3.23□□□□□ -1.89
RPRD1B-209ENST00000622494 DMBT1Q9UGM3 2413 aaPredicted RBP3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 TNXBP22105 4242 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 IGKV2D-24A0A075B6R9 120 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 IGHV3OR16-9A0A0B4J2B5 98 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 EPM2AB3EWF7 344 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 F8VRH5 84 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 CRPP02741 224 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 INAFM2P0DMQ5 153 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 IGLC3P0DOY3 106 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 XCL1P47992 114 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 HNRNPA3P51991 378 aaKnown RBP3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 LINC01545Q5VT33 79 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 CD164L2Q6UWJ8 174 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 NFE4Q86UQ8 179 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 C2orf88Q9BSF0 95 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 HMCN2Q8NDA2 5059 aa3.22□□□□□ -1.89
RPRD1B-209ENST00000622494 C11orf86A6NJI1 115 aa3.21□□□□□ -1.9
RPRD1B-209ENST00000622494 IGKCP01834 107 aa3.21□□□□□ -1.9
RPRD1B-209ENST00000622494 ZNF22P17026 224 aaPredicted RBP3.21□□□□□ -1.9
RPRD1B-209ENST00000622494 KRTAP10-4P60372 401 aaPredicted RBP3.21□□□□□ -1.9
RPRD1B-209ENST00000622494 HERVK_113P63121 156 aa3.21□□□□□ -1.9
RPRD1B-209ENST00000622494 SEC11AP67812 179 aa3.21□□□□□ -1.9
RPRD1B-209ENST00000622494 SCXQ7RTU7 201 aa3.21□□□□□ -1.9
RPRD1B-209ENST00000622494 C5orf38Q86SI9 138 aa3.21□□□□□ -1.9
RPRD1B-209ENST00000622494 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
RPRD1B-209ENST00000622494 GEMIN7Q9H840 131 aaKnown RBP3.21□□□□□ -1.9
RPRD1B-209ENST00000622494 CDKN2A-AS1Q9UH64 79 aa3.21□□□□□ -1.9
RPRD1B-209ENST00000622494 IGLV5-45A0A087WSX0 123 aa3.2□□□□□ -1.9
RPRD1B-209ENST00000622494 A0A087WZ39 114 aa3.2□□□□□ -1.9
RPRD1B-209ENST00000622494 DPM2O94777 84 aa3.2□□□□□ -1.9
RPRD1B-209ENST00000622494 JOSD1Q15040 202 aaPredicted RBP3.2□□□□□ -1.9
RPRD1B-209ENST00000622494 TMEM170BQ5T4T1 132 aa3.2□□□□□ -1.9
RPRD1B-209ENST00000622494 LINC01561Q8N1V8 128 aa3.2□□□□□ -1.9
RPRD1B-209ENST00000622494 STPG4Q8N801 248 aa3.2□□□□□ -1.9
RPRD1B-209ENST00000622494 RMI2Q96E14 147 aa3.2□□□□□ -1.9
RPRD1B-209ENST00000622494 IGHV3-64A0A075B6Q5 118 aa3.19□□□□□ -1.9
RPRD1B-209ENST00000622494 TMEM223A0PJW6 202 aa3.19□□□□□ -1.9
RPRD1B-209ENST00000622494 COX7A2LO14548 114 aa3.19□□□□□ -1.9
RPRD1B-209ENST00000622494 SPINK8P0C7L1 97 aa3.19□□□□□ -1.9
RPRD1B-209ENST00000622494 CHTF8P0CG12 524 aa3.19□□□□□ -1.9
RPRD1B-209ENST00000622494 PLNP26678 52 aa3.19□□□□□ -1.9
RPRD1B-209ENST00000622494 PYY3Q5JQD4 70 aa3.19□□□□□ -1.9
RPRD1B-209ENST00000622494 Q6ZSA8 131 aa3.19□□□□□ -1.9
RPRD1B-209ENST00000622494 ATOH7Q8N100 152 aa3.19□□□□□ -1.9
RPRD1B-209ENST00000622494 LINC00469Q8N7U9 141 aa3.19□□□□□ -1.9
RPRD1B-209ENST00000622494 LINC00526Q96FQ7 95 aa3.19□□□□□ -1.9
RPRD1B-209ENST00000622494 CHAC1Q9BUX1 264 aa3.19□□□□□ -1.9
RPRD1B-209ENST00000622494 IGHV1-58A0A0C4DH39 117 aa3.18□□□□□ -1.9
RPRD1B-209ENST00000622494 C20orf202A1L168 122 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms