RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 IFITM1P13164 125 aa14.44□□□□□ -0.1
SPAST-204ENST00000621856 CKS1BP61024 79 aa14.44□□□□□ -0.1
SPAST-204ENST00000621856 STAB2Q8WWQ8 2551 aa14.43□□□□□ -0.1
SPAST-204ENST00000621856 CFC1BP0CG36 223 aa14.43□□□□□ -0.1
SPAST-204ENST00000621856 CFC1P0CG37 223 aa14.43□□□□□ -0.1
SPAST-204ENST00000621856 DNHD1Q96M86 4753 aa14.42□□□□□ -0.1
SPAST-204ENST00000621856 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.42□□□□□ -0.1
SPAST-204ENST00000621856 KIAA0087Q14695 138 aa14.42□□□□□ -0.1
SPAST-204ENST00000621856 KLK5Q9Y337 293 aaPredicted RBP14.42□□□□□ -0.1
SPAST-204ENST00000621856 CXCL5P42830 114 aa14.41□□□□□ -0.1
SPAST-204ENST00000621856 C2orf82Q6UX34 121 aa14.41□□□□□ -0.1
SPAST-204ENST00000621856 C1orf43Q9BWL3 253 aa14.41□□□□□ -0.1
SPAST-204ENST00000621856 LINC00158P58513 81 aa14.41□□□□□ -0.1
SPAST-204ENST00000621856 SPAG11BQ08648 103 aa14.41□□□□□ -0.1
SPAST-204ENST00000621856 LINC00308Q8TCZ7 52 aa14.41□□□□□ -0.1
SPAST-204ENST00000621856 COPS9Q8WXC6 57 aa14.41□□□□□ -0.1
SPAST-204ENST00000621856 UPK3BQ9BT76 320 aa14.41□□□□□ -0.1
SPAST-204ENST00000621856 IBA57-AS1B1ANH7 110 aa14.4□□□□□ -0.1
SPAST-204ENST00000621856 APLNQ9ULZ1 77 aa14.39□□□□□ -0.11
SPAST-204ENST00000621856 IGKV2D-24A0A075B6R9 120 aa14.38□□□□□ -0.11
SPAST-204ENST00000621856 KRTAP26-1Q6PEX3 210 aa14.38□□□□□ -0.11
SPAST-204ENST00000621856 Q9HAA7 133 aa14.38□□□□□ -0.11
SPAST-204ENST00000621856 PGPEP1Q9NXJ5 209 aa14.38□□□□□ -0.11
SPAST-204ENST00000621856 ERG28Q9UKR5 140 aa14.38□□□□□ -0.11
SPAST-204ENST00000621856 A0A0B4J2C4 111 aa14.38□□□□□ -0.11
SPAST-204ENST00000621856 A0A1W2PPM0 123 aa14.38□□□□□ -0.11
SPAST-204ENST00000621856 EIF4EBP3O60516 100 aaPredicted RBP14.38□□□□□ -0.11
SPAST-204ENST00000621856 PFN2P35080 140 aa14.38□□□□□ -0.11
SPAST-204ENST00000621856 MIR7-3HGQ8N6C7 128 aa14.38□□□□□ -0.11
SPAST-204ENST00000621856 PRO1854Q9UHT4 67 aa14.38□□□□□ -0.11
SPAST-204ENST00000621856 NUPR2A6NF83 97 aa14.37□□□□□ -0.11
SPAST-204ENST00000621856 UBE2DNLQ8IWF7 75 aa14.36□□□□□ -0.11
SPAST-204ENST00000621856 FABP2P12104 132 aa14.35□□□□□ -0.11
SPAST-204ENST00000621856 SOSTDC1Q6X4U4 206 aa14.35□□□□□ -0.11
SPAST-204ENST00000621856 TSPAN13O95857 204 aa14.34□□□□□ -0.11
SPAST-204ENST00000621856 C6orf223Q8N319 242 aa14.34□□□□□ -0.11
SPAST-204ENST00000621856 LINC00526Q96FQ7 95 aa14.34□□□□□ -0.11
SPAST-204ENST00000621856 UBE2V1Q13404 147 aa14.32□□□□□ -0.12
SPAST-204ENST00000621856 MEGF8Q7Z7M0 2845 aa14.31□□□□□ -0.12
SPAST-204ENST00000621856 GAGE10A6NGK3 116 aa14.31□□□□□ -0.12
SPAST-204ENST00000621856 HIGD2BQ4VC39 106 aa14.31□□□□□ -0.12
SPAST-204ENST00000621856 PPDPFQ9H3Y8 114 aa14.31□□□□□ -0.12
SPAST-204ENST00000621856 H7C2G1 150 aa14.3□□□□□ -0.12
SPAST-204ENST00000621856 UNQ6190/PRO20217Q6UXQ8 127 aa14.3□□□□□ -0.12
SPAST-204ENST00000621856 SPCS1Q9Y6A9 102 aa14.3□□□□□ -0.12
SPAST-204ENST00000621856 ZNF561-AS1K7EIQ3 104 aa14.29□□□□□ -0.12
SPAST-204ENST00000621856 GTF2H5Q6ZYL4 71 aa14.29□□□□□ -0.12
SPAST-204ENST00000621856 RMI2Q96E14 147 aa14.29□□□□□ -0.12
SPAST-204ENST00000621856 Q1RN00 199 aa14.29□□□□□ -0.12
SPAST-204ENST00000621856 C10orf25Q5T742 122 aa14.29□□□□□ -0.12
SPAST-204ENST00000621856 NTN5Q8WTR8 489 aaPredicted RBP14.29□□□□□ -0.12
SPAST-204ENST00000621856 PRKDCP78527 4128 aaKnown RBP14.29□□□□□ -0.12
SPAST-204ENST00000621856 K7EP34 96 aa14.28□□□□□ -0.12
SPAST-204ENST00000621856 COX17Q14061 63 aa14.28□□□□□ -0.12
SPAST-204ENST00000621856 C15orf56Q8N910 161 aa14.28□□□□□ -0.12
SPAST-204ENST00000621856 C9orf116Q5BN46 136 aaPredicted RBP14.27□□□□□ -0.12
SPAST-204ENST00000621856 LOC107984156A0A0G2JMH3 177 aa14.27□□□□□ -0.13
SPAST-204ENST00000621856 ARL17AQ8IVW1 177 aa14.27□□□□□ -0.13
SPAST-204ENST00000621856 SND1-IT1Q9HBX3 110 aa14.26□□□□□ -0.13
SPAST-204ENST00000621856 RPL13AP40429 203 aaKnown RBP14.25□□□□□ -0.13
SPAST-204ENST00000621856 CAMK2N2Q96S95 79 aa14.25□□□□□ -0.13
SPAST-204ENST00000621856 PSMB2P49721 201 aa14.24□□□□□ -0.13
SPAST-204ENST00000621856 DYNC2H1Q8NCM8 4307 aaKnown RBP14.24□□□□□ -0.13
SPAST-204ENST00000621856 LYRM7Q5U5X0 104 aa14.23□□□□□ -0.13
SPAST-204ENST00000621856 GVQW2A0A096LPI5 108 aaPredicted RBP14.22□□□□□ -0.13
SPAST-204ENST00000621856 C2orf48Q96LS8 159 aa14.21□□□□□ -0.13
SPAST-204ENST00000621856 C6orf48Q9UBA6 75 aa14.21□□□□□ -0.13
SPAST-204ENST00000621856 SCGB1C2P0DMR2 95 aa14.21□□□□□ -0.14
SPAST-204ENST00000621856 TRBV30A0A0K0K1B3 111 aa14.19□□□□□ -0.14
SPAST-204ENST00000621856 CASC10Q5T4H9 136 aa14.18□□□□□ -0.14
SPAST-204ENST00000621856 MUC7Q8TAX7 377 aa14.18□□□□□ -0.14
SPAST-204ENST00000621856 KRTAP1-5Q9BYS1 174 aa14.18□□□□□ -0.14
SPAST-204ENST00000621856 TRAV13-2A0A0B4J235 113 aa14.18□□□□□ -0.14
SPAST-204ENST00000621856 F8WDY8 70 aa14.18□□□□□ -0.14
SPAST-204ENST00000621856 Q6ZRU5 148 aa14.18□□□□□ -0.14
SPAST-204ENST00000621856 USP17L23D6RBM5 183 aa14.16□□□□□ -0.14
SPAST-204ENST00000621856 IGKV2-28A0A075B6P5 120 aa14.15□□□□□ -0.14
SPAST-204ENST00000621856 IGKV2D-28P01615 120 aa14.15□□□□□ -0.14
SPAST-204ENST00000621856 TRIAP1O43715 76 aa14.15□□□□□ -0.14
SPAST-204ENST00000621856 SYCNQ0VAF6 134 aa14.14□□□□□ -0.15
SPAST-204ENST00000621856 LINC00337Q8N6G1 96 aa14.14□□□□□ -0.15
SPAST-204ENST00000621856 H3BMG7 143 aa14.13□□□□□ -0.15
SPAST-204ENST00000621856 TTC32Q5I0X7 151 aa14.12□□□□□ -0.15
SPAST-204ENST00000621856 COX6CP09669 75 aa14.12□□□□□ -0.15
SPAST-204ENST00000621856 TRBV20-1A0A075B6N2 111 aa14.11□□□□□ -0.15
SPAST-204ENST00000621856 LECT2O14960 151 aa14.11□□□□□ -0.15
SPAST-204ENST00000621856 TCL1BO95988 128 aa14.11□□□□□ -0.15
SPAST-204ENST00000621856 DNAH1Q9P2D7 4330 aa14.1□□□□□ -0.15
SPAST-204ENST00000621856 PSCAO43653 123 aa14.1□□□□□ -0.15
SPAST-204ENST00000621856 NDUFC2O95298 119 aa14.1□□□□□ -0.15
SPAST-204ENST00000621856 OR13C6PQ8NH95 151 aa14.1□□□□□ -0.15
SPAST-204ENST00000621856 NBDYA0A0U1RRE5 68 aa14.1□□□□□ -0.15
SPAST-204ENST00000621856 CARD19Q96LW7 228 aa14.1□□□□□ -0.15
SPAST-204ENST00000621856 CSMD3Q7Z407 3707 aa14.09□□□□□ -0.15
SPAST-204ENST00000621856 DNAH7Q8WXX0 4024 aa14.09□□□□□ -0.15
SPAST-204ENST00000621856 NDUFC2-KCTD14E9PQ53 114 aa14.07□□□□□ -0.16
SPAST-204ENST00000621856 XAGE1AQ9HD64 81 aa14.07□□□□□ -0.16
SPAST-204ENST00000621856 PRR3P79522 188 aaKnown RBP14.07□□□□□ -0.16
SPAST-204ENST00000621856 PLECQ15149 4684 aaKnown RBP14.06□□□□□ -0.16
SPAST-204ENST00000621856 NCR3O14931 201 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms