RNA–Protein interactions for RNA: ENST00000619192.4

PMPCA-209, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-209ENST00000619192 HIST1H2BKO60814 126 aa13.52□□□□□ -0.25
PMPCA-209ENST00000619192 HIST1H2BJP06899 126 aa13.52□□□□□ -0.25
PMPCA-209ENST00000619192 HIST1H2BOP23527 126 aa13.52□□□□□ -0.25
PMPCA-209ENST00000619192 HIST1H2BBP33778 126 aa13.52□□□□□ -0.25
PMPCA-209ENST00000619192 HIST1H2BDP58876 126 aa13.52□□□□□ -0.25
PMPCA-209ENST00000619192 HIST1H2BCP62807 126 aa13.52□□□□□ -0.25
PMPCA-209ENST00000619192 HIST2H2BEQ16778 126 aa13.52□□□□□ -0.25
PMPCA-209ENST00000619192 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.52□□□□□ -0.25
PMPCA-209ENST00000619192 C2orf82Q6UX34 121 aa13.52□□□□□ -0.25
PMPCA-209ENST00000619192 HIST1H2BHQ93079 126 aa13.52□□□□□ -0.25
PMPCA-209ENST00000619192 HIST1H2BNQ99877 126 aa13.52□□□□□ -0.25
PMPCA-209ENST00000619192 HIST1H2BMQ99879 126 aa13.52□□□□□ -0.25
PMPCA-209ENST00000619192 MYCBP2O75592 4640 aa13.51□□□□□ -0.25
PMPCA-209ENST00000619192 NUPR1O60356 82 aa13.51□□□□□ -0.25
PMPCA-209ENST00000619192 ZNF22P17026 224 aaPredicted RBP13.51□□□□□ -0.25
PMPCA-209ENST00000619192 S100A1P23297 94 aa13.51□□□□□ -0.25
PMPCA-209ENST00000619192 MAJINQ3KP22 176 aa13.51□□□□□ -0.25
PMPCA-209ENST00000619192 PKHD1L1Q86WI1 4243 aa13.51□□□□□ -0.25
PMPCA-209ENST00000619192 IGLV5-39A0A0G2JS06 123 aa13.5□□□□□ -0.25
PMPCA-209ENST00000619192 PLA2G1BP04054 148 aaKnown RBP13.49□□□□□ -0.25
PMPCA-209ENST00000619192 PRSS2P07478 247 aa13.49□□□□□ -0.25
PMPCA-209ENST00000619192 CXCL5P42830 114 aa13.49□□□□□ -0.25
PMPCA-209ENST00000619192 NDUFA6P56556 154 aa13.49□□□□□ -0.25
PMPCA-209ENST00000619192 C6orf226Q5I0X4 101 aa13.49□□□□□ -0.25
PMPCA-209ENST00000619192 C11orf86A6NJI1 115 aa13.48□□□□□ -0.25
PMPCA-209ENST00000619192 H3BRM9 83 aa13.48□□□□□ -0.25
PMPCA-209ENST00000619192 STPG4Q8N801 248 aa13.48□□□□□ -0.25
PMPCA-209ENST00000619192 TOMM7Q9P0U1 55 aa13.48□□□□□ -0.25
PMPCA-209ENST00000619192 ATP6V1G1O75348 118 aa13.47□□□□□ -0.25
PMPCA-209ENST00000619192 LEPROTL1O95214 131 aa13.47□□□□□ -0.25
PMPCA-209ENST00000619192 SPINK8P0C7L1 97 aa13.47□□□□□ -0.25
PMPCA-209ENST00000619192 Q6ZRP5 223 aa13.47□□□□□ -0.25
PMPCA-209ENST00000619192 COX7B2Q8TF08 81 aa13.47□□□□□ -0.25
PMPCA-209ENST00000619192 CHTOPQ9Y3Y2 248 aaKnown RBP13.47□□□□□ -0.25
PMPCA-209ENST00000619192 F8VRH5 84 aa13.46□□□□□ -0.25
PMPCA-209ENST00000619192 CKS1BP61024 79 aa13.46□□□□□ -0.25
PMPCA-209ENST00000619192 GAGE2BQ13066 116 aa13.46□□□□□ -0.25
PMPCA-209ENST00000619192 NDUFC2-KCTD14E9PQ53 114 aa13.45□□□□□ -0.26
PMPCA-209ENST00000619192 RPL18AQ02543 176 aaKnown RBP13.45□□□□□ -0.26
PMPCA-209ENST00000619192 DPH3Q96FX2 82 aa13.45□□□□□ -0.26
PMPCA-209ENST00000619192 ODF1Q14990 250 aa13.43□□□□□ -0.26
PMPCA-209ENST00000619192 COA6Q5JTJ3 125 aaKnown RBP13.43□□□□□ -0.26
PMPCA-209ENST00000619192 A0A1W2PNN7 141 aa13.42□□□□□ -0.26
PMPCA-209ENST00000619192 C9orf116Q5BN46 136 aaPredicted RBP13.42□□□□□ -0.26
PMPCA-209ENST00000619192 HSPB8Q9UJY1 196 aa13.42□□□□□ -0.26
PMPCA-209ENST00000619192 FLG2Q5D862 2391 aaPredicted RBP13.42□□□□□ -0.26
PMPCA-209ENST00000619192 INAFM2P0DMQ5 153 aa13.41□□□□□ -0.26
PMPCA-209ENST00000619192 RPL37AP61513 92 aaKnown RBP13.4□□□□□ -0.26
PMPCA-209ENST00000619192 TMEM223A0PJW6 202 aa13.38□□□□□ -0.27
PMPCA-209ENST00000619192 TMEM170BQ5T4T1 132 aa13.38□□□□□ -0.27
PMPCA-209ENST00000619192 FAT3Q8TDW7 4589 aa13.38□□□□□ -0.27
PMPCA-209ENST00000619192 C7orf33Q8WU49 177 aa13.37□□□□□ -0.27
PMPCA-209ENST00000619192 FABP4P15090 132 aa13.36□□□□□ -0.27
PMPCA-209ENST00000619192 C9orf129Q5T035 196 aaKnown RBP13.36□□□□□ -0.27
PMPCA-209ENST00000619192 KRTAP7-1Q8IUC3 87 aa13.36□□□□□ -0.27
PMPCA-209ENST00000619192 LRP1Q07954 4544 aaKnown RBP13.36□□□□□ -0.27
PMPCA-209ENST00000619192 GAGE2EQ4V326 116 aa13.35□□□□□ -0.27
PMPCA-209ENST00000619192 GAGE2DQ9UEU5 116 aa13.35□□□□□ -0.27
PMPCA-209ENST00000619192 SFTA2Q6UW10 78 aa13.34□□□□□ -0.27
PMPCA-209ENST00000619192 ZNF625Q96I27 306 aaPredicted RBP13.34□□□□□ -0.27
PMPCA-209ENST00000619192 FAM168BA1KXE4 195 aa13.32□□□□□ -0.28
PMPCA-209ENST00000619192 PLNP26678 52 aa13.32□□□□□ -0.28
PMPCA-209ENST00000619192 MAP1LC3CQ9BXW4 147 aa13.31□□□□□ -0.28
PMPCA-209ENST00000619192 HNRNPA3P51991 378 aaKnown RBP13.3□□□□□ -0.28
PMPCA-209ENST00000619192 PRR3P79522 188 aaKnown RBP13.3□□□□□ -0.28
PMPCA-209ENST00000619192 H0Y8G0 127 aa13.29□□□□□ -0.28
PMPCA-209ENST00000619192 DPM2O94777 84 aa13.29□□□□□ -0.28
PMPCA-209ENST00000619192 SYS1-DBNDD2H3BUS1 97 aa13.28□□□□□ -0.28
PMPCA-209ENST00000619192 COX17Q14061 63 aa13.28□□□□□ -0.28
PMPCA-209ENST00000619192 DMBT1Q9UGM3 2413 aaPredicted RBP13.27□□□□□ -0.29
PMPCA-209ENST00000619192 PHF5AQ7RTV0 110 aaKnown RBP13.27□□□□□ -0.29
PMPCA-209ENST00000619192 XAGE1AQ9HD64 81 aa13.27□□□□□ -0.29
PMPCA-209ENST00000619192 PLA2G2DQ9UNK4 145 aa13.27□□□□□ -0.29
PMPCA-209ENST00000619192 IGKCP01834 107 aa13.26□□□□□ -0.29
PMPCA-209ENST00000619192 FAM19A5Q7Z5A7 132 aaPredicted RBP13.26□□□□□ -0.29
PMPCA-209ENST00000619192 ERG28Q9UKR5 140 aa13.26□□□□□ -0.29
PMPCA-209ENST00000619192 SERTAD4-AS1Q5TG53 156 aa13.25□□□□□ -0.29
PMPCA-209ENST00000619192 LINC01545Q5VT33 79 aa13.25□□□□□ -0.29
PMPCA-209ENST00000619192 PET117Q6UWS5 81 aa13.24□□□□□ -0.29
PMPCA-209ENST00000619192 PMCHL2Q9BQD1 86 aa13.24□□□□□ -0.29
PMPCA-209ENST00000619192 M0QXV9 152 aa13.23□□□□□ -0.29
PMPCA-209ENST00000619192 TP73-AS1Q9UF72 201 aa13.23□□□□□ -0.29
PMPCA-209ENST00000619192 IGLV5-37A0A075B6J1 123 aa13.22□□□□□ -0.29
PMPCA-209ENST00000619192 LEPROTO15243 131 aa13.22□□□□□ -0.29
PMPCA-209ENST00000619192 PSORS1C2Q9UIG4 136 aa13.22□□□□□ -0.29
PMPCA-209ENST00000619192 HERC1Q15751 4861 aa13.22□□□□□ -0.29
PMPCA-209ENST00000619192 C3orf79P0CE67 100 aa13.21□□□□□ -0.29
PMPCA-209ENST00000619192 TSPEAR-AS2P59090 65 aa13.21□□□□□ -0.29
PMPCA-209ENST00000619192 KRTAP11-1Q8IUC1 163 aa13.21□□□□□ -0.29
PMPCA-209ENST00000619192 KRTAP29-1A8MX34 341 aaPredicted RBP13.2□□□□□ -0.3
PMPCA-209ENST00000619192 PFN2P35080 140 aa13.2□□□□□ -0.3
PMPCA-209ENST00000619192 HERV-K104P63124 156 aa13.2□□□□□ -0.3
PMPCA-209ENST00000619192 PLEKHB2Q96CS7 222 aa13.2□□□□□ -0.3
PMPCA-209ENST00000619192 C22orf24Q9Y442 160 aa13.2□□□□□ -0.3
PMPCA-209ENST00000619192 SRSF9Q13242 221 aaKnown RBP eCLIP13.19□□□□□ -0.3
PMPCA-209ENST00000619192 NDUFA12Q9UI09 145 aa13.19□□□□□ -0.3
PMPCA-209ENST00000619192 HERVK_113P61574 105 aa13.18□□□□□ -0.3
PMPCA-209ENST00000619192 SND1-IT1Q9HBX3 110 aa13.18□□□□□ -0.3
PMPCA-209ENST00000619192 E9PLD3 99 aa13.16□□□□□ -0.3
PMPCA-209ENST00000619192 J3QQQ9 107 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms