RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 LY6G6DO95868 133 aa13.34□□□□□ -0.27
PCDHGB3-202ENST00000618934 Q6Q795 121 aa13.34□□□□□ -0.27
PCDHGB3-202ENST00000618934 PPDPFQ9H3Y8 114 aa13.34□□□□□ -0.27
PCDHGB3-202ENST00000618934 CRPP02741 224 aa13.33□□□□□ -0.27
PCDHGB3-202ENST00000618934 BAALC-AS2P0C853 105 aa13.33□□□□□ -0.27
PCDHGB3-202ENST00000618934 FAM222AQ5U5X8 452 aa13.33□□□□□ -0.27
PCDHGB3-202ENST00000618934 Q8N3U1 123 aa13.33□□□□□ -0.27
PCDHGB3-202ENST00000618934 TRAV13-2A0A0B4J235 113 aa13.33□□□□□ -0.28
PCDHGB3-202ENST00000618934 RPL28P46779 137 aaKnown RBP13.33□□□□□ -0.28
PCDHGB3-202ENST00000618934 SMIM11BQ8TCY0 68 aa13.32□□□□□ -0.28
PCDHGB3-202ENST00000618934 TRACP01848 142 aa13.32□□□□□ -0.28
PCDHGB3-202ENST00000618934 CCDC179H3BU77 68 aa13.31□□□□□ -0.28
PCDHGB3-202ENST00000618934 NSD1Q96L73 2696 aaPredicted RBP13.31□□□□□ -0.28
PCDHGB3-202ENST00000618934 IBA57-AS1B1ANH7 110 aa13.31□□□□□ -0.28
PCDHGB3-202ENST00000618934 C6orf226Q5I0X4 101 aa13.3□□□□□ -0.28
PCDHGB3-202ENST00000618934 PRO0255Q9UI72 69 aa13.3□□□□□ -0.28
PCDHGB3-202ENST00000618934 DEFB135Q30KP9 77 aa13.3□□□□□ -0.28
PCDHGB3-202ENST00000618934 A0A087WYN8 130 aa13.29□□□□□ -0.28
PCDHGB3-202ENST00000618934 ATRQ13535 2644 aa13.29□□□□□ -0.28
PCDHGB3-202ENST00000618934 FAM240AA0A1B0GVK7 77 aa13.29□□□□□ -0.28
PCDHGB3-202ENST00000618934 A0A1B0GUV1 79 aa13.28□□□□□ -0.28
PCDHGB3-202ENST00000618934 PAX4O43316 350 aa13.28□□□□□ -0.28
PCDHGB3-202ENST00000618934 ATP5G1P05496 136 aa13.27□□□□□ -0.29
PCDHGB3-202ENST00000618934 SS18Q15532 418 aa13.26□□□□□ -0.29
PCDHGB3-202ENST00000618934 MRPL23Q16540 153 aaKnown RBP13.26□□□□□ -0.29
PCDHGB3-202ENST00000618934 C9orf129Q5T035 196 aaKnown RBP13.25□□□□□ -0.29
PCDHGB3-202ENST00000618934 LINC00269Q8N2A0 174 aa13.25□□□□□ -0.29
PCDHGB3-202ENST00000618934 SMCR5Q8TEV8 140 aa13.25□□□□□ -0.29
PCDHGB3-202ENST00000618934 SMIM9A6NGZ8 99 aa13.25□□□□□ -0.29
PCDHGB3-202ENST00000618934 INAFM1C9JVW0 142 aa13.25□□□□□ -0.29
PCDHGB3-202ENST00000618934 IGLV10-54A0A075B6I4 117 aa13.24□□□□□ -0.29
PCDHGB3-202ENST00000618934 PRR3P79522 188 aaKnown RBP13.23□□□□□ -0.29
PCDHGB3-202ENST00000618934 CELA1Q9UNI1 258 aa13.23□□□□□ -0.29
PCDHGB3-202ENST00000618934 IGHV4-28A0A0C4DH34 117 aa13.23□□□□□ -0.29
PCDHGB3-202ENST00000618934 OR13C6PQ8NH95 151 aa13.23□□□□□ -0.29
PCDHGB3-202ENST00000618934 TEP1Q99973 2627 aaKnown RBP13.23□□□□□ -0.29
PCDHGB3-202ENST00000618934 MALP21145 153 aa13.22□□□□□ -0.29
PCDHGB3-202ENST00000618934 HIVEP1P15822 2718 aa13.22□□□□□ -0.29
PCDHGB3-202ENST00000618934 Q8IZM0 81 aa13.22□□□□□ -0.29
PCDHGB3-202ENST00000618934 C9orf66Q5T8R8 295 aa13.21□□□□□ -0.29
PCDHGB3-202ENST00000618934 LYRM9A8MSI8 78 aa13.21□□□□□ -0.3
PCDHGB3-202ENST00000618934 KIAA0087Q14695 138 aa13.21□□□□□ -0.3
PCDHGB3-202ENST00000618934 C9orf116Q5BN46 136 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB3-202ENST00000618934 TRBV7-7A0A0K0K1E9 115 aa13.19□□□□□ -0.3
PCDHGB3-202ENST00000618934 ANGP03950 147 aaKnown RBP13.19□□□□□ -0.3
PCDHGB3-202ENST00000618934 SLPIP03973 132 aa13.19□□□□□ -0.3
PCDHGB3-202ENST00000618934 CHCHD10Q8WYQ3 142 aaPredicted RBP13.19□□□□□ -0.3
PCDHGB3-202ENST00000618934 LECT2O14960 151 aa13.18□□□□□ -0.3
PCDHGB3-202ENST00000618934 DAD1P61803 113 aa13.18□□□□□ -0.3
PCDHGB3-202ENST00000618934 CD164L2Q6UWJ8 174 aa13.17□□□□□ -0.3
PCDHGB3-202ENST00000618934 REG3AQ06141 175 aa13.16□□□□□ -0.3
PCDHGB3-202ENST00000618934 Q8NAQ8 132 aa13.16□□□□□ -0.3
PCDHGB3-202ENST00000618934 DNAL4O96015 105 aa13.15□□□□□ -0.3
PCDHGB3-202ENST00000618934 ACYP1P07311 99 aa13.15□□□□□ -0.3
PCDHGB3-202ENST00000618934 NANOS2P60321 138 aaKnown RBP13.15□□□□□ -0.3
PCDHGB3-202ENST00000618934 H0YGX0 51 aa13.15□□□□□ -0.3
PCDHGB3-202ENST00000618934 HTN3P15516 51 aa13.15□□□□□ -0.3
PCDHGB3-202ENST00000618934 GAGE2AQ6NT46 116 aa13.15□□□□□ -0.3
PCDHGB3-202ENST00000618934 Q8NDZ9 215 aa13.15□□□□□ -0.3
PCDHGB3-202ENST00000618934 SVIPQ8NHG7 77 aa13.15□□□□□ -0.3
PCDHGB3-202ENST00000618934 SDIM1Q6ZPB5 146 aa13.13□□□□□ -0.31
PCDHGB3-202ENST00000618934 LINC00526Q96FQ7 95 aa13.13□□□□□ -0.31
PCDHGB3-202ENST00000618934 C14orf132Q9NPU4 83 aa13.13□□□□□ -0.31
PCDHGB3-202ENST00000618934 APOC4P55056 127 aa13.12□□□□□ -0.31
PCDHGB3-202ENST00000618934 LINC01561Q8N1V8 128 aa13.12□□□□□ -0.31
PCDHGB3-202ENST00000618934 C6orf223Q8N319 242 aa13.12□□□□□ -0.31
PCDHGB3-202ENST00000618934 PKD1L1Q8TDX9 2849 aa13.11□□□□□ -0.31
PCDHGB3-202ENST00000618934 FAM236AA0A1B0GUQ0 79 aa13.11□□□□□ -0.31
PCDHGB3-202ENST00000618934 FAM236BA0A1B0GV22 79 aa13.11□□□□□ -0.31
PCDHGB3-202ENST00000618934 C10orf25Q5T742 122 aa13.11□□□□□ -0.31
PCDHGB3-202ENST00000618934 NCR3O14931 201 aa13.1□□□□□ -0.31
PCDHGB3-202ENST00000618934 INAFM2P0DMQ5 153 aa13.1□□□□□ -0.31
PCDHGB3-202ENST00000618934 CFAP161Q6P656 301 aa13.1□□□□□ -0.31
PCDHGB3-202ENST00000618934 LINC00643Q86TS7 51 aa13.09□□□□□ -0.31
PCDHGB3-202ENST00000618934 C3orf56Q8N813 242 aa13.09□□□□□ -0.31
PCDHGB3-202ENST00000618934 OBSCN-AS1Q96MR7 158 aa13.08□□□□□ -0.32
PCDHGB3-202ENST00000618934 IMUPQ9GZP8 106 aa13.08□□□□□ -0.32
PCDHGB3-202ENST00000618934 ANK2Q01484 3957 aa13.07□□□□□ -0.32
PCDHGB3-202ENST00000618934 UNQ6190/PRO20217Q6UXQ8 127 aa13.07□□□□□ -0.32
PCDHGB3-202ENST00000618934 IGHV4-30-4P0DP06 118 aa13.07□□□□□ -0.32
PCDHGB3-202ENST00000618934 MIFP14174 115 aa13.06□□□□□ -0.32
PCDHGB3-202ENST00000618934 SPART-AS1P0CW21 52 aa13.05□□□□□ -0.32
PCDHGB3-202ENST00000618934 KLK12Q9UKR0 248 aa13.05□□□□□ -0.32
PCDHGB3-202ENST00000618934 COX17Q14061 63 aa13.04□□□□□ -0.32
PCDHGB3-202ENST00000618934 CXCL5P42830 114 aa13.03□□□□□ -0.32
PCDHGB3-202ENST00000618934 LELP1Q5T871 98 aa13.03□□□□□ -0.32
PCDHGB3-202ENST00000618934 KLK5Q9Y337 293 aaPredicted RBP13.03□□□□□ -0.32
PCDHGB3-202ENST00000618934 NDUFC2O95298 119 aa13.03□□□□□ -0.32
PCDHGB3-202ENST00000618934 SMIM20Q8N5G0 67 aa13.02□□□□□ -0.32
PCDHGB3-202ENST00000618934 ORMDL1Q9P0S3 153 aa13.02□□□□□ -0.32
PCDHGB3-202ENST00000618934 ENHOQ6UWT2 76 aa13.02□□□□□ -0.33
PCDHGB3-202ENST00000618934 SPAG11BQ08648 103 aa13.01□□□□□ -0.33
PCDHGB3-202ENST00000618934 Q8N814 137 aa13.01□□□□□ -0.33
PCDHGB3-202ENST00000618934 LINC00846Q9NV44 126 aa13.01□□□□□ -0.33
PCDHGB3-202ENST00000618934 TMEM126AQ9H061 195 aa13.01□□□□□ -0.33
PCDHGB3-202ENST00000618934 CYSRT1A8MQ03 144 aa13□□□□□ -0.33
PCDHGB3-202ENST00000618934 LINC00167Q96N53 147 aa13□□□□□ -0.33
PCDHGB3-202ENST00000618934 WFDC9Q8NEX5 89 aa13□□□□□ -0.33
PCDHGB3-202ENST00000618934 C6orf99Q4VX62 202 aa12.99□□□□□ -0.33
PCDHGB3-202ENST00000618934 PRR34Q9NV39 138 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms