RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 EDN2P20800 178 aa7.22□□□□□ -1.25
CUL4A-212ENST00000617546 IGKV2-24A0A0C4DH68 120 aa7.22□□□□□ -1.25
CUL4A-212ENST00000617546 PLCE1Q9P212 2302 aa7.22□□□□□ -1.25
CUL4A-212ENST00000617546 IL17DQ8TAD2 202 aa7.22□□□□□ -1.25
CUL4A-212ENST00000617546 SMCR5Q8TEV8 140 aa7.22□□□□□ -1.25
CUL4A-212ENST00000617546 REG3GQ6UW15 175 aa7.21□□□□□ -1.25
CUL4A-212ENST00000617546 WIPF1O43516 503 aa7.21□□□□□ -1.25
CUL4A-212ENST00000617546 RETNQ9HD89 108 aa7.21□□□□□ -1.25
CUL4A-212ENST00000617546 C9orf116Q5BN46 136 aaPredicted RBP7.21□□□□□ -1.26
CUL4A-212ENST00000617546 C18orf65Q6ZTR6 163 aa7.2□□□□□ -1.26
CUL4A-212ENST00000617546 KLKP1Q107X0 134 aa7.2□□□□□ -1.26
CUL4A-212ENST00000617546 DSCAMO60469 2012 aa7.2□□□□□ -1.26
CUL4A-212ENST00000617546 RPL37AP8A6NKH3 93 aa7.2□□□□□ -1.26
CUL4A-212ENST00000617546 LINC01006Q8NI28 216 aa7.2□□□□□ -1.26
CUL4A-212ENST00000617546 NAV3Q8IVL0 2385 aa7.2□□□□□ -1.26
CUL4A-212ENST00000617546 LRCOL1A6NCL2 159 aa7.19□□□□□ -1.26
CUL4A-212ENST00000617546 LY6G6DO95868 133 aa7.19□□□□□ -1.26
CUL4A-212ENST00000617546 PLXNB1O43157 2135 aa7.19□□□□□ -1.26
CUL4A-212ENST00000617546 ZFHX2Q9C0A1 2572 aaPredicted RBP7.19□□□□□ -1.26
CUL4A-212ENST00000617546 TP53AIP1Q9HCN2 124 aa7.18□□□□□ -1.26
CUL4A-212ENST00000617546 CACNA1GO43497 2377 aa7.18□□□□□ -1.26
CUL4A-212ENST00000617546 ABCA4P78363 2273 aa7.18□□□□□ -1.26
CUL4A-212ENST00000617546 ELOF1P60002 83 aaKnown RBP7.18□□□□□ -1.26
CUL4A-212ENST00000617546 C16orf95Q9H693 158 aa7.18□□□□□ -1.26
CUL4A-212ENST00000617546 AGRNO00468 2067 aa7.18□□□□□ -1.26
CUL4A-212ENST00000617546 UTRNP46939 3433 aa7.18□□□□□ -1.26
CUL4A-212ENST00000617546 CREBBPQ92793 2442 aa7.17□□□□□ -1.26
CUL4A-212ENST00000617546 SPTAN1Q13813 2472 aaKnown RBP7.17□□□□□ -1.26
CUL4A-212ENST00000617546 SMIM29Q86T20 159 aa7.17□□□□□ -1.26
CUL4A-212ENST00000617546 DOPEY2Q9Y3R5 2298 aa7.17□□□□□ -1.26
CUL4A-212ENST00000617546 PRR14LQ5THK1 2151 aa7.16□□□□□ -1.26
CUL4A-212ENST00000617546 CYP4F30PQ9H0H9 118 aa7.16□□□□□ -1.26
CUL4A-212ENST00000617546 NBASA2RRP1 2371 aa7.15□□□□□ -1.26
CUL4A-212ENST00000617546 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.15□□□□□ -1.26
CUL4A-212ENST00000617546 A0A0J9YWU9 116 aa7.15□□□□□ -1.27
CUL4A-212ENST00000617546 AVPP01185 164 aa7.15□□□□□ -1.27
CUL4A-212ENST00000617546 PRRC2AP48634 2157 aaKnown RBP7.14□□□□□ -1.27
CUL4A-212ENST00000617546 C1orf64Q8NEQ6 169 aa7.14□□□□□ -1.27
CUL4A-212ENST00000617546 ARHGAP32A7KAX9 2087 aa7.14□□□□□ -1.27
CUL4A-212ENST00000617546 A0A096LNI7 61 aa7.13□□□□□ -1.27
CUL4A-212ENST00000617546 GVQW2A0A096LPI5 108 aaPredicted RBP7.13□□□□□ -1.27
CUL4A-212ENST00000617546 PCNX1Q96RV3 2341 aa7.13□□□□□ -1.27
CUL4A-212ENST00000617546 GOLGB1Q14789 3259 aaKnown RBP7.13□□□□□ -1.27
CUL4A-212ENST00000617546 Q9BRP9 147 aa7.13□□□□□ -1.27
CUL4A-212ENST00000617546 IGHV4-30-4P0DP06 118 aa7.12□□□□□ -1.27
CUL4A-212ENST00000617546 A0A087WSZ3 146 aa7.12□□□□□ -1.27
CUL4A-212ENST00000617546 TM2D3Q9BRN9 247 aa7.12□□□□□ -1.27
CUL4A-212ENST00000617546 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.11□□□□□ -1.272e-8■■■□□ 14.7
CUL4A-212ENST00000617546 Q8NBF4 154 aa7.11□□□□□ -1.27
CUL4A-212ENST00000617546 A8MTW9 85 aa7.11□□□□□ -1.27
CUL4A-212ENST00000617546 NANOS2P60321 138 aaKnown RBP7.11□□□□□ -1.27
CUL4A-212ENST00000617546 KIAA0087Q14695 138 aa7.11□□□□□ -1.27
CUL4A-212ENST00000617546 ANKHD1Q8IWZ3 2542 aaKnown RBP7.11□□□□□ -1.27
CUL4A-212ENST00000617546 LYPD5Q6UWN5 251 aa7.1□□□□□ -1.27
CUL4A-212ENST00000617546 OTOGLQ3ZCN5 2332 aa7.1□□□□□ -1.27
CUL4A-212ENST00000617546 LINC00167Q96N53 147 aa7.09□□□□□ -1.27
CUL4A-212ENST00000617546 IGLV6-57P01721 117 aa7.09□□□□□ -1.27
CUL4A-212ENST00000617546 Q6ZRU5 148 aa7.09□□□□□ -1.27
CUL4A-212ENST00000617546 CDSNQ15517 529 aa7.08□□□□□ -1.28
CUL4A-212ENST00000617546 C7orf33Q8WU49 177 aa7.08□□□□□ -1.28
CUL4A-212ENST00000617546 H3BNG1 76 aa7.08□□□□□ -1.28
CUL4A-212ENST00000617546 H7BZZ5 65 aa7.08□□□□□ -1.28
CUL4A-212ENST00000617546 CD164Q04900 197 aa7.08□□□□□ -1.28
CUL4A-212ENST00000617546 TRBV7-4A0A0J9YYF1 115 aa7.07□□□□□ -1.28
CUL4A-212ENST00000617546 BDP1A6H8Y1 2624 aa7.06□□□□□ -1.28
CUL4A-212ENST00000617546 PCOTHQ58A44 107 aa7.06□□□□□ -1.28
CUL4A-212ENST00000617546 Q6ZTC4 211 aa7.06□□□□□ -1.28
CUL4A-212ENST00000617546 C6orf48Q9UBA6 75 aa7.06□□□□□ -1.28
CUL4A-212ENST00000617546 VPREB1P12018 145 aa7.06□□□□□ -1.28
CUL4A-212ENST00000617546 OBSCN-AS1Q96MR7 158 aa7.06□□□□□ -1.28
CUL4A-212ENST00000617546 ACYP2P14621 99 aa7.05□□□□□ -1.28
CUL4A-212ENST00000617546 IGLV9-49A0A0B4J1Y8 123 aa7.05□□□□□ -1.28
CUL4A-212ENST00000617546 PIEZO1Q92508 2521 aa7.04□□□□□ -1.28
CUL4A-212ENST00000617546 IGHV6-1A0A0B4J1U7 121 aa7.04□□□□□ -1.28
CUL4A-212ENST00000617546 LINC00336Q6ZUF6 198 aa7.04□□□□□ -1.28
CUL4A-212ENST00000617546 A0A1W2PPR1 153 aa7.04□□□□□ -1.28
CUL4A-212ENST00000617546 C22orf24Q9Y442 160 aa7.04□□□□□ -1.28
CUL4A-212ENST00000617546 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.04□□□□□ -1.28
CUL4A-212ENST00000617546 Q6ZRX8 168 aa7.04□□□□□ -1.28
CUL4A-212ENST00000617546 PTPRBP23467 1997 aa7.04□□□□□ -1.28
CUL4A-212ENST00000617546 SPINK6Q6UWN8 80 aa7.03□□□□□ -1.28
CUL4A-212ENST00000617546 LINC01556Q5JQF7 62 aa7.03□□□□□ -1.28
CUL4A-212ENST00000617546 MED13LQ71F56 2210 aa7.03□□□□□ -1.28
CUL4A-212ENST00000617546 TRAV22A0A0B4J277 110 aa7.03□□□□□ -1.28
CUL4A-212ENST00000617546 FAM208BQ5VWN6 2430 aa7.02□□□□□ -1.29
CUL4A-212ENST00000617546 A0A1B0GU69 56 aa7.01□□□□□ -1.29
CUL4A-212ENST00000617546 ATP11AUNQ6ZP68 121 aa7.01□□□□□ -1.29
CUL4A-212ENST00000617546 C8orf87E5RJ46 101 aa7□□□□□ -1.29
CUL4A-212ENST00000617546 EIF4EBP3O60516 100 aaPredicted RBP7□□□□□ -1.29
CUL4A-212ENST00000617546 ACACBO00763 2458 aa7□□□□□ -1.29
CUL4A-212ENST00000617546 SPAG11AQ6PDA7 123 aa7□□□□□ -1.29
CUL4A-212ENST00000617546 PRR15Q8IV56 129 aa7□□□□□ -1.29
CUL4A-212ENST00000617546 NOTCH3Q9UM47 2321 aa7□□□□□ -1.29
CUL4A-212ENST00000617546 MOBPQ13875 183 aa6.99□□□□□ -1.29
CUL4A-212ENST00000617546 CUL9Q8IWT3 2517 aa6.99□□□□□ -1.29
CUL4A-212ENST00000617546 Q9UF83 564 aa6.98□□□□□ -1.29
CUL4A-212ENST00000617546 COL27A1Q8IZC6 1860 aaPredicted RBP6.98□□□□□ -1.29
CUL4A-212ENST00000617546 LINC00476Q8WZB0 136 aa6.98□□□□□ -1.29
CUL4A-212ENST00000617546 PTPRQQ9UMZ3 2332 aa6.98□□□□□ -1.29
CUL4A-212ENST00000617546 LOC101927531A0A1B0GV80 90 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms