RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 LINC01546A6NGU7 62 aa11.04□□□□□ -0.64
PTPRT-210ENST00000617474 UBE2AP49459 152 aa11.04□□□□□ -0.64
PTPRT-210ENST00000617474 Q8N2B8 174 aa11.04□□□□□ -0.64
PTPRT-210ENST00000617474 A0A0U1RQV1 116 aa11.03□□□□□ -0.64
PTPRT-210ENST00000617474 DNAH14Q0VDD8 3507 aa11.03□□□□□ -0.64
PTPRT-210ENST00000617474 LAMA1P25391 3075 aa11.03□□□□□ -0.64
PTPRT-210ENST00000617474 PRR4Q16378 134 aa11.03□□□□□ -0.64
PTPRT-210ENST00000617474 C11orf45Q8TAV5 145 aa11.03□□□□□ -0.64
PTPRT-210ENST00000617474 Q8IZM0 81 aa11.03□□□□□ -0.64
PTPRT-210ENST00000617474 H0Y9J4 135 aa11.02□□□□□ -0.64
PTPRT-210ENST00000617474 LINC00337Q8N6G1 96 aa11.02□□□□□ -0.64
PTPRT-210ENST00000617474 A0A087WZ39 114 aa11.02□□□□□ -0.65
PTPRT-210ENST00000617474 DEFB131BA0A096LNP1 70 aa11.02□□□□□ -0.65
PTPRT-210ENST00000617474 NTM-AS1Q6ZSK4 140 aa11.02□□□□□ -0.65
PTPRT-210ENST00000617474 PKIGQ9Y2B9 76 aa11.02□□□□□ -0.65
PTPRT-210ENST00000617474 A8MTW9 85 aa11.01□□□□□ -0.65
PTPRT-210ENST00000617474 Q6JHZ5 121 aa11.01□□□□□ -0.65
PTPRT-210ENST00000617474 NDUFB1O75438 58 aa11.01□□□□□ -0.65
PTPRT-210ENST00000617474 M0QXV9 152 aa11.01□□□□□ -0.65
PTPRT-210ENST00000617474 SYCNQ0VAF6 134 aa11.01□□□□□ -0.65
PTPRT-210ENST00000617474 FAM19A5Q7Z5A7 132 aaPredicted RBP11.01□□□□□ -0.65
PTPRT-210ENST00000617474 AKAP13Q12802 2813 aa11□□□□□ -0.65
PTPRT-210ENST00000617474 LINC00846Q9NV44 126 aa10.99□□□□□ -0.65
PTPRT-210ENST00000617474 NDUFC2O95298 119 aa10.99□□□□□ -0.65
PTPRT-210ENST00000617474 BEAN1Q3B7T3 259 aa10.99□□□□□ -0.65
PTPRT-210ENST00000617474 ZNF73O43830 326 aaPredicted RBP10.99□□□□□ -0.65
PTPRT-210ENST00000617474 MIFP14174 115 aa10.99□□□□□ -0.65
PTPRT-210ENST00000617474 Q8N814 137 aa10.99□□□□□ -0.65
PTPRT-210ENST00000617474 COL4A2P08572 1712 aa10.98□□□□□ -0.65
PTPRT-210ENST00000617474 RPL37AP8A6NKH3 93 aa10.98□□□□□ -0.65
PTPRT-210ENST00000617474 ZNF843Q8N446 348 aa10.98□□□□□ -0.65
PTPRT-210ENST00000617474 KPRPQ5T749 579 aaPredicted RBP10.97□□□□□ -0.65
PTPRT-210ENST00000617474 FAM19A1Q7Z5A9 133 aa10.97□□□□□ -0.65
PTPRT-210ENST00000617474 LOC107984640A0A0U1RRK4 108 aa10.97□□□□□ -0.65
PTPRT-210ENST00000617474 FHL2Q14192 279 aa10.97□□□□□ -0.65
PTPRT-210ENST00000617474 SMR3AQ99954 134 aa10.97□□□□□ -0.65
PTPRT-210ENST00000617474 CSDC2Q9Y534 153 aaKnown RBP10.97□□□□□ -0.65
PTPRT-210ENST00000617474 BRI3O95415 125 aa10.97□□□□□ -0.65
PTPRT-210ENST00000617474 HRCT1Q6UXD1 115 aa10.97□□□□□ -0.65
PTPRT-210ENST00000617474 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.96□□□□□ -0.65
PTPRT-210ENST00000617474 TRBV10-3A0A0K0K1G6 114 aa10.96□□□□□ -0.65
PTPRT-210ENST00000617474 NBEAQ8NFP9 2946 aa10.96□□□□□ -0.65
PTPRT-210ENST00000617474 CELA1Q9UNI1 258 aa10.96□□□□□ -0.65
PTPRT-210ENST00000617474 LELP1Q5T871 98 aa10.96□□□□□ -0.66
PTPRT-210ENST00000617474 WFDC10BQ8IUB3 73 aa10.96□□□□□ -0.66
PTPRT-210ENST00000617474 C6orf223Q8N319 242 aa10.95□□□□□ -0.66
PTPRT-210ENST00000617474 FAM19A4Q96LR4 140 aa10.95□□□□□ -0.66
PTPRT-210ENST00000617474 ATRQ13535 2644 aa10.95□□□□□ -0.66
PTPRT-210ENST00000617474 HECTD1Q9ULT8 2610 aa10.94□□□□□ -0.66
PTPRT-210ENST00000617474 HILS1P60008 231 aa10.94□□□□□ -0.66
PTPRT-210ENST00000617474 FAM19A3Q7Z5A8 133 aa10.94□□□□□ -0.66
PTPRT-210ENST00000617474 DSPP15924 2871 aaKnown RBP10.94□□□□□ -0.66
PTPRT-210ENST00000617474 WFDC13Q8IUB5 93 aa10.94□□□□□ -0.66
PTPRT-210ENST00000617474 C11orf72Q8NBR9 251 aa10.94□□□□□ -0.66
PTPRT-210ENST00000617474 MGAM2Q2M2H8 2515 aa10.93□□□□□ -0.66
PTPRT-210ENST00000617474 IGLV1-51P01701 117 aa10.93□□□□□ -0.66
PTPRT-210ENST00000617474 SOSTDC1Q6X4U4 206 aa10.93□□□□□ -0.66
PTPRT-210ENST00000617474 PPDPFQ9H3Y8 114 aa10.93□□□□□ -0.66
PTPRT-210ENST00000617474 M0R378 163 aa10.92□□□□□ -0.66
PTPRT-210ENST00000617474 COX17Q14061 63 aa10.92□□□□□ -0.66
PTPRT-210ENST00000617474 COL27A1Q8IZC6 1860 aaPredicted RBP10.92□□□□□ -0.66
PTPRT-210ENST00000617474 IGLV5-39A0A0G2JS06 123 aa10.91□□□□□ -0.66
PTPRT-210ENST00000617474 A0A0J9YWU9 116 aa10.91□□□□□ -0.66
PTPRT-210ENST00000617474 OXLD1Q5BKU9 147 aa10.91□□□□□ -0.66
PTPRT-210ENST00000617474 SPTSSBQ8NFR3 76 aa10.91□□□□□ -0.66
PTPRT-210ENST00000617474 LRCOL1A6NCL2 159 aa10.9□□□□□ -0.66
PTPRT-210ENST00000617474 NDUFC2-KCTD14E9PQ53 114 aa10.9□□□□□ -0.66
PTPRT-210ENST00000617474 FAM218AQ96MZ4 157 aa10.9□□□□□ -0.66
PTPRT-210ENST00000617474 FRYQ5TBA9 3013 aa10.9□□□□□ -0.66
PTPRT-210ENST00000617474 Q8N3U1 123 aa10.9□□□□□ -0.67
PTPRT-210ENST00000617474 LY6G6DO95868 133 aa10.89□□□□□ -0.67
PTPRT-210ENST00000617474 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.88□□□□□ -0.67
PTPRT-210ENST00000617474 FAM30AQ9NZY2 134 aa10.88□□□□□ -0.67
PTPRT-210ENST00000617474 IGHV4-30-4P0DP06 118 aa10.87□□□□□ -0.67
PTPRT-210ENST00000617474 SPEGQ15772 3267 aa10.87□□□□□ -0.67
PTPRT-210ENST00000617474 IGHV3OR16-9A0A0B4J2B5 98 aa10.87□□□□□ -0.67
PTPRT-210ENST00000617474 TRBV7-7A0A0K0K1E9 115 aa10.87□□□□□ -0.67
PTPRT-210ENST00000617474 RETNQ9HD89 108 aa10.87□□□□□ -0.67
PTPRT-210ENST00000617474 IGKV4-1P06312 121 aa10.87□□□□□ -0.67
PTPRT-210ENST00000617474 KIR2DL5BQ8NHK3 375 aa10.86□□□□□ -0.67
PTPRT-210ENST00000617474 CHKB-CPT1BH3BT56 60 aa10.85□□□□□ -0.67
PTPRT-210ENST00000617474 TRAV7A0A075B6U4 112 aa10.85□□□□□ -0.67
PTPRT-210ENST00000617474 NANOS2P60321 138 aaKnown RBP10.85□□□□□ -0.67
PTPRT-210ENST00000617474 SBSPONQ8IVN8 264 aa10.85□□□□□ -0.67
PTPRT-210ENST00000617474 FHL3Q13643 280 aa10.84□□□□□ -0.67
PTPRT-210ENST00000617474 EIF4EBP3O60516 100 aaPredicted RBP10.84□□□□□ -0.67
PTPRT-210ENST00000617474 SHISA2Q6UWI4 295 aa10.84□□□□□ -0.67
PTPRT-210ENST00000617474 EYSQ5T1H1 3165 aa10.83□□□□□ -0.68
PTPRT-210ENST00000617474 MAST4O15021 2626 aa10.83□□□□□ -0.68
PTPRT-210ENST00000617474 ZNF292O60281 2723 aa10.83□□□□□ -0.68
PTPRT-210ENST00000617474 NDUFC1O43677 76 aa10.83□□□□□ -0.68
PTPRT-210ENST00000617474 B9D2Q9BPU9 175 aa10.83□□□□□ -0.68
PTPRT-210ENST00000617474 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.82□□□□□ -0.68
PTPRT-210ENST00000617474 Q6ZVQ6 151 aa10.82□□□□□ -0.68
PTPRT-210ENST00000617474 Q8N9L7 120 aa10.82□□□□□ -0.68
PTPRT-210ENST00000617474 CHD6Q8TD26 2715 aa10.81□□□□□ -0.68
PTPRT-210ENST00000617474 COL6A3P12111 3177 aa10.81□□□□□ -0.68
PTPRT-210ENST00000617474 A0A1B0GUV1 79 aa10.8□□□□□ -0.68
PTPRT-210ENST00000617474 FLNAP21333 2647 aaKnown RBP10.8□□□□□ -0.68
PTPRT-210ENST00000617474 LINC00575Q6W349 94 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms