RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 C6orf48Q9UBA6 75 aa11.91□□□□□ -0.5
SUSD3-205ENST00000617293 ATP5LO75964 103 aa11.9□□□□□ -0.5
SUSD3-205ENST00000617293 CKS1BP61024 79 aa11.89□□□□□ -0.51
SUSD3-205ENST00000617293 Q8IZM0 81 aa11.89□□□□□ -0.51
SUSD3-205ENST00000617293 SCO1O75880 301 aa11.88□□□□□ -0.51
SUSD3-205ENST00000617293 KRTAP10-4P60372 401 aaPredicted RBP11.88□□□□□ -0.51
SUSD3-205ENST00000617293 IGLV5-45A0A087WSX0 123 aa11.87□□□□□ -0.51
SUSD3-205ENST00000617293 TRBV30A0A0K0K1B3 111 aa11.87□□□□□ -0.51
SUSD3-205ENST00000617293 HSBP1O75506 76 aa11.87□□□□□ -0.51
SUSD3-205ENST00000617293 C7orf33Q8WU49 177 aa11.87□□□□□ -0.51
SUSD3-205ENST00000617293 SMIM1B2RUZ4 78 aa11.86□□□□□ -0.51
SUSD3-205ENST00000617293 TLX1NBP0CAT3 122 aa11.86□□□□□ -0.51
SUSD3-205ENST00000617293 IGLC3P0DOY3 106 aa11.86□□□□□ -0.51
SUSD3-205ENST00000617293 H3BRM9 83 aa11.85□□□□□ -0.51
SUSD3-205ENST00000617293 SPINK8P0C7L1 97 aa11.85□□□□□ -0.51
SUSD3-205ENST00000617293 C9orf116Q5BN46 136 aaPredicted RBP11.85□□□□□ -0.51
SUSD3-205ENST00000617293 Q6ZRP5 223 aa11.85□□□□□ -0.51
SUSD3-205ENST00000617293 FAM19A2Q8N3H0 131 aa11.85□□□□□ -0.51
SUSD3-205ENST00000617293 A0A1W2PNN7 141 aa11.84□□□□□ -0.51
SUSD3-205ENST00000617293 GAGE2EQ4V326 116 aa11.84□□□□□ -0.51
SUSD3-205ENST00000617293 GAGE2DQ9UEU5 116 aa11.84□□□□□ -0.51
SUSD3-205ENST00000617293 SMCPP49901 116 aaPredicted RBP11.83□□□□□ -0.52
SUSD3-205ENST00000617293 COX7B2Q8TF08 81 aa11.83□□□□□ -0.52
SUSD3-205ENST00000617293 IFI27L1Q96BM0 104 aa11.83□□□□□ -0.52
SUSD3-205ENST00000617293 FLG2Q5D862 2391 aaPredicted RBP11.81□□□□□ -0.52
SUSD3-205ENST00000617293 NDUFC2-KCTD14E9PQ53 114 aa11.81□□□□□ -0.52
SUSD3-205ENST00000617293 F8VRH5 84 aa11.81□□□□□ -0.52
SUSD3-205ENST00000617293 SERF1AO75920 110 aa11.81□□□□□ -0.52
SUSD3-205ENST00000617293 ZNF22P17026 224 aaPredicted RBP11.81□□□□□ -0.52
SUSD3-205ENST00000617293 CXCL5P42830 114 aa11.81□□□□□ -0.52
SUSD3-205ENST00000617293 CHTOPQ9Y3Y2 248 aaKnown RBP11.81□□□□□ -0.52
SUSD3-205ENST00000617293 C11orf86A6NJI1 115 aa11.79□□□□□ -0.52
SUSD3-205ENST00000617293 LINC00310P59036 64 aa11.79□□□□□ -0.52
SUSD3-205ENST00000617293 TMEM170BQ5T4T1 132 aa11.79□□□□□ -0.52
SUSD3-205ENST00000617293 FAM168BA1KXE4 195 aa11.78□□□□□ -0.52
SUSD3-205ENST00000617293 NUPR1O60356 82 aa11.78□□□□□ -0.52
SUSD3-205ENST00000617293 HNRNPA3P51991 378 aaKnown RBP11.78□□□□□ -0.52
SUSD3-205ENST00000617293 TRAV12-1A0A0B4J245 112 aa11.77□□□□□ -0.53
SUSD3-205ENST00000617293 MYCBP2O75592 4640 aa11.76□□□□□ -0.53
SUSD3-205ENST00000617293 PKHD1L1Q86WI1 4243 aa11.76□□□□□ -0.53
SUSD3-205ENST00000617293 LEPROTL1O95214 131 aa11.76□□□□□ -0.53
SUSD3-205ENST00000617293 IGLV5-39A0A0G2JS06 123 aa11.75□□□□□ -0.53
SUSD3-205ENST00000617293 H0Y8G0 127 aa11.75□□□□□ -0.53
SUSD3-205ENST00000617293 J3QL48 77 aa11.75□□□□□ -0.53
SUSD3-205ENST00000617293 PHF5AQ7RTV0 110 aaKnown RBP11.75□□□□□ -0.53
SUSD3-205ENST00000617293 FAM19A5Q7Z5A7 132 aaPredicted RBP11.75□□□□□ -0.53
SUSD3-205ENST00000617293 FABP4P15090 132 aa11.74□□□□□ -0.53
SUSD3-205ENST00000617293 PRR3P79522 188 aaKnown RBP11.74□□□□□ -0.53
SUSD3-205ENST00000617293 C9orf129Q5T035 196 aaKnown RBP11.74□□□□□ -0.53
SUSD3-205ENST00000617293 HIST1H2BKO60814 126 aa11.72□□□□□ -0.53
SUSD3-205ENST00000617293 HIST1H2BJP06899 126 aa11.72□□□□□ -0.53
SUSD3-205ENST00000617293 HIST1H2BOP23527 126 aa11.72□□□□□ -0.53
SUSD3-205ENST00000617293 HIST1H2BBP33778 126 aa11.72□□□□□ -0.53
SUSD3-205ENST00000617293 HIST1H2BDP58876 126 aa11.72□□□□□ -0.53
SUSD3-205ENST00000617293 HIST1H2BCP62807 126 aa11.72□□□□□ -0.53
SUSD3-205ENST00000617293 HIST2H2BEQ16778 126 aa11.72□□□□□ -0.53
SUSD3-205ENST00000617293 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.72□□□□□ -0.53
SUSD3-205ENST00000617293 HIST1H2BHQ93079 126 aa11.72□□□□□ -0.53
SUSD3-205ENST00000617293 HIST1H2BNQ99877 126 aa11.72□□□□□ -0.53
SUSD3-205ENST00000617293 HIST1H2BMQ99879 126 aa11.72□□□□□ -0.53
SUSD3-205ENST00000617293 XAGE1AQ9HD64 81 aa11.72□□□□□ -0.53
SUSD3-205ENST00000617293 HSPB8Q9UJY1 196 aa11.72□□□□□ -0.53
SUSD3-205ENST00000617293 KRTAP7-1Q8IUC3 87 aa11.7□□□□□ -0.54
SUSD3-205ENST00000617293 TMEM223A0PJW6 202 aa11.69□□□□□ -0.54
SUSD3-205ENST00000617293 ODF1Q14990 250 aa11.69□□□□□ -0.54
SUSD3-205ENST00000617293 KRTAP29-1A8MX34 341 aaPredicted RBP11.68□□□□□ -0.54
SUSD3-205ENST00000617293 M0QXV9 152 aa11.68□□□□□ -0.54
SUSD3-205ENST00000617293 PSORS1C2Q9UIG4 136 aa11.68□□□□□ -0.54
SUSD3-205ENST00000617293 PFN2P35080 140 aa11.67□□□□□ -0.54
SUSD3-205ENST00000617293 LCE2AQ5TA79 106 aaPredicted RBP11.67□□□□□ -0.54
SUSD3-205ENST00000617293 ZNF625Q96I27 306 aaPredicted RBP11.67□□□□□ -0.54
SUSD3-205ENST00000617293 SERTAD4-AS1Q5TG53 156 aa11.66□□□□□ -0.54
SUSD3-205ENST00000617293 LRP1Q07954 4544 aaKnown RBP11.65□□□□□ -0.54
SUSD3-205ENST00000617293 OXTP01178 125 aa11.65□□□□□ -0.54
SUSD3-205ENST00000617293 UBE2BP63146 152 aa11.65□□□□□ -0.54
SUSD3-205ENST00000617293 C1orf137Q5JT78 98 aa11.65□□□□□ -0.54
SUSD3-205ENST00000617293 S100A1P23297 94 aa11.64□□□□□ -0.55
SUSD3-205ENST00000617293 SFTA2Q6UW10 78 aa11.64□□□□□ -0.55
SUSD3-205ENST00000617293 MAP1LC3CQ9BXW4 147 aa11.64□□□□□ -0.55
SUSD3-205ENST00000617293 ERG28Q9UKR5 140 aa11.64□□□□□ -0.55
SUSD3-205ENST00000617293 C22orf24Q9Y442 160 aa11.64□□□□□ -0.55
SUSD3-205ENST00000617293 FAT3Q8TDW7 4589 aa11.64□□□□□ -0.55
SUSD3-205ENST00000617293 KRTAP11-1Q8IUC1 163 aa11.63□□□□□ -0.55
SUSD3-205ENST00000617293 PMCHL2Q9BQD1 86 aa11.63□□□□□ -0.55
SUSD3-205ENST00000617293 PLNP26678 52 aa11.62□□□□□ -0.55
SUSD3-205ENST00000617293 ATP6V1G1O75348 118 aa11.61□□□□□ -0.55
SUSD3-205ENST00000617293 COX17Q14061 63 aa11.61□□□□□ -0.55
SUSD3-205ENST00000617293 SPINK6Q6UWN8 80 aa11.61□□□□□ -0.55
SUSD3-205ENST00000617293 DPM2O94777 84 aa11.6□□□□□ -0.55
SUSD3-205ENST00000617293 SRSF9Q13242 221 aaKnown RBP eCLIP11.6□□□□□ -0.55
SUSD3-205ENST00000617293 DMBT1Q9UGM3 2413 aaPredicted RBP11.6□□□□□ -0.55
SUSD3-205ENST00000617293 IGKCP01834 107 aa11.59□□□□□ -0.55
SUSD3-205ENST00000617293 LBHQ53QV2 105 aaPredicted RBP11.59□□□□□ -0.55
SUSD3-205ENST00000617293 LINC00158P58513 81 aa11.58□□□□□ -0.56
SUSD3-205ENST00000617293 MRPL55Q7Z7F7 128 aaKnown RBP11.58□□□□□ -0.56
SUSD3-205ENST00000617293 SND1-IT1Q9HBX3 110 aa11.58□□□□□ -0.56
SUSD3-205ENST00000617293 PLA2G2DQ9UNK4 145 aa11.58□□□□□ -0.56
SUSD3-205ENST00000617293 A0A0U1RRA0 63 aa11.57□□□□□ -0.56
SUSD3-205ENST00000617293 TP73-AS1Q9UF72 201 aa11.57□□□□□ -0.56
SUSD3-205ENST00000617293 SYS1-DBNDD2H3BUS1 97 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms