RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 LINC00337Q8N6G1 96 aa9.86□□□□□ -0.83
CSNK1E-215ENST00000612795 PPBPP02775 128 aa9.85□□□□□ -0.83
CSNK1E-215ENST00000612795 S100A8P05109 93 aa9.85□□□□□ -0.83
CSNK1E-215ENST00000612795 SRSF3P84103 164 aaKnown RBP9.85□□□□□ -0.83
CSNK1E-215ENST00000612795 PNRC1Q12796 327 aaPredicted RBP9.85□□□□□ -0.83
CSNK1E-215ENST00000612795 ZC2HC1BQ5TFG8 222 aa9.85□□□□□ -0.83
CSNK1E-215ENST00000612795 SMIM27A0A1W2PRY6 76 aa9.84□□□□□ -0.83
CSNK1E-215ENST00000612795 MRPL54Q6P161 138 aaKnown RBP9.84□□□□□ -0.83
CSNK1E-215ENST00000612795 ALKAL2Q6UX46 152 aa9.84□□□□□ -0.83
CSNK1E-215ENST00000612795 NKAPP1Q8N9T2 125 aa9.84□□□□□ -0.83
CSNK1E-215ENST00000612795 ADIRFQ15847 76 aa9.83□□□□□ -0.84
CSNK1E-215ENST00000612795 ORMDL3Q8N138 153 aa9.83□□□□□ -0.84
CSNK1E-215ENST00000612795 VCX2Q9H322 139 aa9.83□□□□□ -0.84
CSNK1E-215ENST00000612795 CXCL5P42830 114 aa9.82□□□□□ -0.84
CSNK1E-215ENST00000612795 PRLHP81277 87 aa9.82□□□□□ -0.84
CSNK1E-215ENST00000612795 ASB16-AS1Q495Z4 193 aa9.82□□□□□ -0.84
CSNK1E-215ENST00000612795 FP248Q71RG6 208 aaPredicted RBP9.82□□□□□ -0.84
CSNK1E-215ENST00000612795 CYSLTR1Q9Y271 337 aa9.82□□□□□ -0.84
CSNK1E-215ENST00000612795 SRP19P09132 144 aaKnown RBP9.81□□□□□ -0.84
CSNK1E-215ENST00000612795 RPL23P62829 140 aaKnown RBP9.81□□□□□ -0.84
CSNK1E-215ENST00000612795 HERVK_113P63121 156 aa9.81□□□□□ -0.84
CSNK1E-215ENST00000612795 PRELID3AQ96N28 172 aa9.81□□□□□ -0.84
CSNK1E-215ENST00000612795 AMELXQ99217 191 aa9.81□□□□□ -0.84
CSNK1E-215ENST00000612795 IGKV2-28A0A075B6P5 120 aa9.8□□□□□ -0.84
CSNK1E-215ENST00000612795 IGKV2D-28P01615 120 aa9.8□□□□□ -0.84
CSNK1E-215ENST00000612795 CDKN2A-AS1Q9UH64 79 aa9.8□□□□□ -0.84
CSNK1E-215ENST00000612795 IGLV5-37A0A075B6J1 123 aa9.79□□□□□ -0.84
CSNK1E-215ENST00000612795 LOC389332A0A1B0GUA5 103 aa9.79□□□□□ -0.84
CSNK1E-215ENST00000612795 C2orf66Q6UXQ4 117 aa9.79□□□□□ -0.84
CSNK1E-215ENST00000612795 TMEM136Q6ZRR5 245 aa9.79□□□□□ -0.84
CSNK1E-215ENST00000612795 TCTE3Q8IZS6 198 aa9.79□□□□□ -0.84
CSNK1E-215ENST00000612795 C3orf22Q8N5N4 141 aa9.79□□□□□ -0.84
CSNK1E-215ENST00000612795 GEMIN7Q9H840 131 aaKnown RBP9.79□□□□□ -0.84
CSNK1E-215ENST00000612795 SEC11AP67812 179 aa9.78□□□□□ -0.84
CSNK1E-215ENST00000612795 SPAG11AQ6PDA7 123 aa9.78□□□□□ -0.84
CSNK1E-215ENST00000612795 FAM19A3Q7Z5A8 133 aa9.78□□□□□ -0.84
CSNK1E-215ENST00000612795 FAM19A1Q7Z5A9 133 aa9.78□□□□□ -0.84
CSNK1E-215ENST00000612795 A0A1B0GXF2 115 aa9.77□□□□□ -0.85
CSNK1E-215ENST00000612795 SEC61BP60468 96 aaKnown RBP9.77□□□□□ -0.85
CSNK1E-215ENST00000612795 KRTAP13-3Q3SY46 172 aa9.77□□□□□ -0.85
CSNK1E-215ENST00000612795 KRTAP4-1Q9BYQ7 146 aa9.77□□□□□ -0.85
CSNK1E-215ENST00000612795 MAP1LC3AQ9H492 121 aa9.77□□□□□ -0.85
CSNK1E-215ENST00000612795 NAT8Q9UHE5 227 aa9.76□□□□□ -0.85
CSNK1E-215ENST00000612795 SCO1O75880 301 aa9.75□□□□□ -0.85
CSNK1E-215ENST00000612795 NPSP0C0P6 89 aa9.75□□□□□ -0.85
CSNK1E-215ENST00000612795 RAB5BP61020 215 aa9.75□□□□□ -0.85
CSNK1E-215ENST00000612795 C4orf48Q5BLP8 95 aa9.75□□□□□ -0.85
CSNK1E-215ENST00000612795 ORMDL2Q53FV1 153 aa9.73□□□□□ -0.85
CSNK1E-215ENST00000612795 PAPPA-AS1Q5QFB9 102 aa9.73□□□□□ -0.85
CSNK1E-215ENST00000612795 COX7B2Q8TF08 81 aa9.73□□□□□ -0.85
CSNK1E-215ENST00000612795 TMEM126AQ9H061 195 aa9.73□□□□□ -0.85
CSNK1E-215ENST00000612795 LAMTOR2Q9Y2Q5 125 aa9.73□□□□□ -0.85
CSNK1E-215ENST00000612795 IGIPA6NJ69 53 aa9.72□□□□□ -0.85
CSNK1E-215ENST00000612795 PRSS47A8MTI9 375 aa9.72□□□□□ -0.85
CSNK1E-215ENST00000612795 SMIM1B2RUZ4 78 aa9.72□□□□□ -0.85
CSNK1E-215ENST00000612795 TMEM238C9JI98 176 aa9.72□□□□□ -0.85
CSNK1E-215ENST00000612795 Q8N8P6 123 aa9.72□□□□□ -0.85
CSNK1E-215ENST00000612795 PLEKHB2Q96CS7 222 aa9.72□□□□□ -0.85
CSNK1E-215ENST00000612795 CBLN2Q8IUK8 224 aa9.71□□□□□ -0.86
CSNK1E-215ENST00000612795 PDZD11Q5EBL8 140 aa9.7□□□□□ -0.86
CSNK1E-215ENST00000612795 ATP5L2Q7Z4Y8 100 aa9.7□□□□□ -0.86
CSNK1E-215ENST00000612795 HIGD2AQ9BW72 106 aa9.7□□□□□ -0.86
CSNK1E-215ENST00000612795 GNB1LQ9BYB4 327 aa9.69□□□□□ -0.86
CSNK1E-215ENST00000612795 K7EMI3 77 aa9.67□□□□□ -0.86
CSNK1E-215ENST00000612795 M0R378 163 aa9.67□□□□□ -0.86
CSNK1E-215ENST00000612795 TIMM17AQ99595 171 aa9.67□□□□□ -0.86
CSNK1E-215ENST00000612795 ATP5LO75964 103 aa9.66□□□□□ -0.86
CSNK1E-215ENST00000612795 DAND5Q8N907 189 aa9.66□□□□□ -0.86
CSNK1E-215ENST00000612795 Q8NBF4 154 aa9.66□□□□□ -0.86
CSNK1E-215ENST00000612795 SPRR4Q96PI1 79 aa9.66□□□□□ -0.86
CSNK1E-215ENST00000612795 NDUFA12Q9UI09 145 aa9.66□□□□□ -0.86
CSNK1E-215ENST00000612795 A0A1B0GVG6 124 aa9.65□□□□□ -0.86
CSNK1E-215ENST00000612795 VPREB1P12018 145 aa9.65□□□□□ -0.86
CSNK1E-215ENST00000612795 PFN2P35080 140 aa9.65□□□□□ -0.86
CSNK1E-215ENST00000612795 TINCRA0A1B0GVN0 87 aa9.64□□□□□ -0.87
CSNK1E-215ENST00000612795 C9JQL5 133 aa9.64□□□□□ -0.87
CSNK1E-215ENST00000612795 SPINK8P0C7L1 97 aa9.64□□□□□ -0.87
CSNK1E-215ENST00000612795 G0S2P27469 103 aa9.64□□□□□ -0.87
CSNK1E-215ENST00000612795 NXT2Q9NPJ8 142 aaKnown RBP9.64□□□□□ -0.87
CSNK1E-215ENST00000612795 ZNF706Q9Y5V0 76 aaPredicted RBP9.64□□□□□ -0.87
CSNK1E-215ENST00000612795 RPL24P83731 157 aaKnown RBP9.63□□□□□ -0.87
CSNK1E-215ENST00000612795 SPINK1P00995 79 aa9.62□□□□□ -0.87
CSNK1E-215ENST00000612795 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
CSNK1E-215ENST00000612795 CFC1BP0CG36 223 aa9.61□□□□□ -0.87
CSNK1E-215ENST00000612795 LCE2CQ5TA81 110 aa9.61□□□□□ -0.87
CSNK1E-215ENST00000612795 TOMM6Q96B49 74 aa9.61□□□□□ -0.87
CSNK1E-215ENST00000612795 SND1-IT1Q9HBX3 110 aa9.61□□□□□ -0.87
CSNK1E-215ENST00000612795 RAB14P61106 215 aa9.6□□□□□ -0.87
CSNK1E-215ENST00000612795 ERASQ7Z444 233 aa9.6□□□□□ -0.87
CSNK1E-215ENST00000612795 FAM19A2Q8N3H0 131 aa9.6□□□□□ -0.87
CSNK1E-215ENST00000612795 SCGB3A1Q96QR1 104 aa9.6□□□□□ -0.87
CSNK1E-215ENST00000612795 PEA15Q15121 130 aa9.59□□□□□ -0.87
CSNK1E-215ENST00000612795 AKAP14Q86UN6 197 aa9.59□□□□□ -0.87
CSNK1E-215ENST00000612795 H3BRM9 83 aa9.57□□□□□ -0.88
CSNK1E-215ENST00000612795 MT1HP80294 61 aa9.57□□□□□ -0.88
CSNK1E-215ENST00000612795 ERG28Q9UKR5 140 aa9.57□□□□□ -0.88
CSNK1E-215ENST00000612795 XP32Q5T750 250 aa9.56□□□□□ -0.88
CSNK1E-215ENST00000612795 MRPL18Q9H0U6 180 aaKnown RBP9.56□□□□□ -0.88
CSNK1E-215ENST00000612795 ADCYAP1P18509 176 aa9.55□□□□□ -0.88
CSNK1E-215ENST00000612795 Q8NDZ9 215 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms