RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 NANOS2P60321 138 aaKnown RBP9.3□□□□□ -0.92
TCF3-220ENST00000611869 SMIM11BQ8TCY0 68 aa9.3□□□□□ -0.92
TCF3-220ENST00000611869 JMJD7-PLA2G4BH0Y9G9 81 aa9.3□□□□□ -0.92
TCF3-220ENST00000611869 C9orf116Q5BN46 136 aaPredicted RBP9.29□□□□□ -0.92
TCF3-220ENST00000611869 TMEM256-PLSCR3K7ERE1 68 aa9.29□□□□□ -0.92
TCF3-220ENST00000611869 SPATA25Q9BR10 227 aa9.29□□□□□ -0.92
TCF3-220ENST00000611869 A0A0J9YWU9 116 aa9.28□□□□□ -0.92
TCF3-220ENST00000611869 Q8IZM0 81 aa9.28□□□□□ -0.92
TCF3-220ENST00000611869 RBM3P98179 157 aaKnown RBP9.28□□□□□ -0.92
TCF3-220ENST00000611869 UNQ6190/PRO20217Q6UXQ8 127 aa9.28□□□□□ -0.92
TCF3-220ENST00000611869 COX7BP24311 80 aa9.27□□□□□ -0.93
TCF3-220ENST00000611869 CHD6Q8TD26 2715 aa9.27□□□□□ -0.93
TCF3-220ENST00000611869 IGKV2-24A0A0C4DH68 120 aa9.27□□□□□ -0.93
TCF3-220ENST00000611869 hADV29S1A0JD25 119 aa9.27□□□□□ -0.93
TCF3-220ENST00000611869 CYSRT1A8MQ03 144 aa9.26□□□□□ -0.93
TCF3-220ENST00000611869 Q6ZTC4 211 aa9.26□□□□□ -0.93
TCF3-220ENST00000611869 TACC2O95359 2948 aa9.26□□□□□ -0.93
TCF3-220ENST00000611869 PRR3P79522 188 aaKnown RBP9.26□□□□□ -0.93
TCF3-220ENST00000611869 MAST4O15021 2626 aa9.26□□□□□ -0.93
TCF3-220ENST00000611869 RNF183Q96D59 192 aa9.25□□□□□ -0.93
TCF3-220ENST00000611869 SYCNQ0VAF6 134 aa9.24□□□□□ -0.93
TCF3-220ENST00000611869 LINC00643Q86TS7 51 aa9.24□□□□□ -0.93
TCF3-220ENST00000611869 XGP55808 180 aa9.24□□□□□ -0.93
TCF3-220ENST00000611869 TRAV10A0A0B4J240 114 aa9.23□□□□□ -0.93
TCF3-220ENST00000611869 CELA1Q9UNI1 258 aa9.23□□□□□ -0.93
TCF3-220ENST00000611869 TEP1Q99973 2627 aaKnown RBP9.23□□□□□ -0.93
TCF3-220ENST00000611869 ZNF575Q86XF7 245 aa9.22□□□□□ -0.93
TCF3-220ENST00000611869 IGLV5-39A0A0G2JS06 123 aa9.22□□□□□ -0.93
TCF3-220ENST00000611869 A0A1B0GUV1 79 aa9.22□□□□□ -0.93
TCF3-220ENST00000611869 A0A1B0GX51 115 aa9.21□□□□□ -0.93
TCF3-220ENST00000611869 MUC3AQ02505 3323 aa9.21□□□□□ -0.94
TCF3-220ENST00000611869 FUSP35637 526 aaKnown RBP eCLIP9.21□□□□□ -0.946e-7■■■□□ 16.8
TCF3-220ENST00000611869 TEX15Q9BXT5 2789 aa9.21□□□□□ -0.94
TCF3-220ENST00000611869 IGHV3OR16-9A0A0B4J2B5 98 aa9.21□□□□□ -0.94
TCF3-220ENST00000611869 Q6ZQY7 126 aa9.2□□□□□ -0.94
TCF3-220ENST00000611869 C6orf223Q8N319 242 aa9.2□□□□□ -0.94
TCF3-220ENST00000611869 X6R8D5 127 aa9.2□□□□□ -0.94
TCF3-220ENST00000611869 IGKV2-28A0A075B6P5 120 aa9.2□□□□□ -0.94
TCF3-220ENST00000611869 IGKV2D-28P01615 120 aa9.2□□□□□ -0.94
TCF3-220ENST00000611869 SDIM1Q6ZPB5 146 aa9.2□□□□□ -0.94
TCF3-220ENST00000611869 KRTAP1-3Q8IUG1 177 aa9.19□□□□□ -0.94
TCF3-220ENST00000611869 CITED1Q99966 193 aa9.19□□□□□ -0.94
TCF3-220ENST00000611869 SS18L2Q9UHA2 77 aa9.19□□□□□ -0.94
TCF3-220ENST00000611869 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.19□□□□□ -0.94
TCF3-220ENST00000611869 TRAV23DV6A0A075B6W5 121 aa9.19□□□□□ -0.94
TCF3-220ENST00000611869 WFDC10BQ8IUB3 73 aa9.19□□□□□ -0.94
TCF3-220ENST00000611869 COX17Q14061 63 aa9.19□□□□□ -0.94
TCF3-220ENST00000611869 NREPQ16612 68 aa9.18□□□□□ -0.94
TCF3-220ENST00000611869 RPL28P46779 137 aaKnown RBP9.18□□□□□ -0.94
TCF3-220ENST00000611869 A8MTW9 85 aa9.18□□□□□ -0.94
TCF3-220ENST00000611869 NDUFV3P56181 108 aaKnown RBP9.18□□□□□ -0.94
TCF3-220ENST00000611869 FAM19A5Q7Z5A7 132 aaPredicted RBP9.17□□□□□ -0.94
TCF3-220ENST00000611869 LINC00337Q8N6G1 96 aa9.17□□□□□ -0.94
TCF3-220ENST00000611869 KLK5Q9Y337 293 aaPredicted RBP9.17□□□□□ -0.94
TCF3-220ENST00000611869 IGLV5-45A0A087WSX0 123 aa9.17□□□□□ -0.94
TCF3-220ENST00000611869 LYPD5Q6UWN5 251 aa9.17□□□□□ -0.94
TCF3-220ENST00000611869 UNC79Q9P2D8 2635 aa9.16□□□□□ -0.94
TCF3-220ENST00000611869 HIGD2AQ9BW72 106 aa9.16□□□□□ -0.94
TCF3-220ENST00000611869 A0A087WYN8 130 aa9.16□□□□□ -0.94
TCF3-220ENST00000611869 ATOX1O00244 68 aa9.16□□□□□ -0.94
TCF3-220ENST00000611869 H3BQ85 93 aa9.15□□□□□ -0.94
TCF3-220ENST00000611869 CDK2AP2O75956 126 aa9.15□□□□□ -0.94
TCF3-220ENST00000611869 Q8N3U1 123 aa9.15□□□□□ -0.94
TCF3-220ENST00000611869 SMCPP49901 116 aaPredicted RBP9.15□□□□□ -0.95
TCF3-220ENST00000611869 SOSTDC1Q6X4U4 206 aa9.14□□□□□ -0.95
TCF3-220ENST00000611869 WDFY3Q8IZQ1 3526 aa9.14□□□□□ -0.95
TCF3-220ENST00000611869 UBE2AP49459 152 aa9.13□□□□□ -0.95
TCF3-220ENST00000611869 ZNF73O43830 326 aaPredicted RBP9.13□□□□□ -0.95
TCF3-220ENST00000611869 PDE6GP18545 87 aa9.13□□□□□ -0.95
TCF3-220ENST00000611869 ITPR1Q14643 2758 aa9.13□□□□□ -0.95
TCF3-220ENST00000611869 TRBV10-3A0A0K0K1G6 114 aa9.13□□□□□ -0.95
TCF3-220ENST00000611869 M0R378 163 aa9.13□□□□□ -0.95
TCF3-220ENST00000611869 SCXQ7RTU7 201 aa9.12□□□□□ -0.95
TCF3-220ENST00000611869 RPL37AP8A6NKH3 93 aa9.12□□□□□ -0.95
TCF3-220ENST00000611869 GIG44P09565 113 aaPredicted RBP9.12□□□□□ -0.95
TCF3-220ENST00000611869 PRO0461Q9UI25 63 aa9.12□□□□□ -0.95
TCF3-220ENST00000611869 CSNK1G2-AS1Q8NCQ2 148 aa9.11□□□□□ -0.95
TCF3-220ENST00000611869 EGFEM1PQ0D2K5 195 aa9.1□□□□□ -0.95
TCF3-220ENST00000611869 GCN1Q92616 2671 aaKnown RBP9.1□□□□□ -0.95
TCF3-220ENST00000611869 C19orf73Q9NVV2 129 aa9.1□□□□□ -0.95
TCF3-220ENST00000611869 ENHOQ6UWT2 76 aa9.1□□□□□ -0.95
TCF3-220ENST00000611869 KRTAP1-1Q07627 177 aa9.09□□□□□ -0.95
TCF3-220ENST00000611869 KRTAP24-1Q3LI83 254 aa9.09□□□□□ -0.95
TCF3-220ENST00000611869 SBSPONQ8IVN8 264 aa9.09□□□□□ -0.95
TCF3-220ENST00000611869 FAM19A1Q7Z5A9 133 aa9.09□□□□□ -0.95
TCF3-220ENST00000611869 UPK3BQ9BT76 320 aa9.09□□□□□ -0.95
TCF3-220ENST00000611869 A0A096LNI7 61 aa9.09□□□□□ -0.95
TCF3-220ENST00000611869 Q8N814 137 aa9.09□□□□□ -0.95
TCF3-220ENST00000611869 LITAFQ99732 161 aa9.08□□□□□ -0.96
TCF3-220ENST00000611869 KRTAP10-3P60369 221 aa9.08□□□□□ -0.96
TCF3-220ENST00000611869 MUC7Q8TAX7 377 aa9.08□□□□□ -0.96
TCF3-220ENST00000611869 C14orf177Q52M58 125 aa9.08□□□□□ -0.96
TCF3-220ENST00000611869 CCKP06307 115 aa9.08□□□□□ -0.96
TCF3-220ENST00000611869 UBR5O95071 2799 aaPredicted RBP9.07□□□□□ -0.96
TCF3-220ENST00000611869 M0R2N4 97 aa9.07□□□□□ -0.96
TCF3-220ENST00000611869 Q8NAQ8 132 aa9.07□□□□□ -0.96
TCF3-220ENST00000611869 EIF4EBP3O60516 100 aaPredicted RBP9.07□□□□□ -0.96
TCF3-220ENST00000611869 PKIGQ9Y2B9 76 aa9.07□□□□□ -0.96
TCF3-220ENST00000611869 SETXQ7Z333 2677 aaKnown RBP9.06□□□□□ -0.96
TCF3-220ENST00000611869 CR1P17927 2039 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms