RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 IGLV10-54A0A075B6I4 117 aa9.36□□□□□ -0.91
NEK3-205ENST00000610828 REG3AQ06141 175 aa9.36□□□□□ -0.91
NEK3-205ENST00000610828 EGFEM1PQ0D2K5 195 aa9.36□□□□□ -0.91
NEK3-205ENST00000610828 PFN2P35080 140 aa9.35□□□□□ -0.91
NEK3-205ENST00000610828 LINC01620Q4KN68 170 aa9.35□□□□□ -0.91
NEK3-205ENST00000610828 TEN1Q86WV5 123 aa9.35□□□□□ -0.91
NEK3-205ENST00000610828 MAST4O15021 2626 aa9.35□□□□□ -0.91
NEK3-205ENST00000610828 CHCHD10Q8WYQ3 142 aaPredicted RBP9.35□□□□□ -0.91
NEK3-205ENST00000610828 CLEC2BQ92478 149 aa9.35□□□□□ -0.91
NEK3-205ENST00000610828 IBA57-AS1B1ANH7 110 aa9.34□□□□□ -0.91
NEK3-205ENST00000610828 LELP1Q5T871 98 aa9.34□□□□□ -0.91
NEK3-205ENST00000610828 CD164L2Q6UWJ8 174 aa9.34□□□□□ -0.91
NEK3-205ENST00000610828 ANKRD29Q8N6D5 301 aa9.34□□□□□ -0.91
NEK3-205ENST00000610828 SPATA25Q9BR10 227 aa9.34□□□□□ -0.91
NEK3-205ENST00000610828 Q8IZM0 81 aa9.33□□□□□ -0.92
NEK3-205ENST00000610828 SIGMAR1Q99720 223 aa9.33□□□□□ -0.92
NEK3-205ENST00000610828 COX7A2LO14548 114 aa9.32□□□□□ -0.92
NEK3-205ENST00000610828 PPDPFLQ8WWR9 84 aa9.32□□□□□ -0.92
NEK3-205ENST00000610828 CARD19Q96LW7 228 aa9.32□□□□□ -0.92
NEK3-205ENST00000610828 PPDPFQ9H3Y8 114 aa9.32□□□□□ -0.92
NEK3-205ENST00000610828 SND1-IT1Q9HBX3 110 aa9.32□□□□□ -0.92
NEK3-205ENST00000610828 C2orf82Q6UX34 121 aa9.32□□□□□ -0.92
NEK3-205ENST00000610828 MALP21145 153 aa9.31□□□□□ -0.92
NEK3-205ENST00000610828 LST1O00453 97 aa9.31□□□□□ -0.92
NEK3-205ENST00000610828 LINC01561Q8N1V8 128 aa9.31□□□□□ -0.92
NEK3-205ENST00000610828 TRBV10-2A0A0K0K1G8 114 aa9.3□□□□□ -0.92
NEK3-205ENST00000610828 CCL18P55774 89 aa9.3□□□□□ -0.92
NEK3-205ENST00000610828 CKS1BP61024 79 aa9.3□□□□□ -0.92
NEK3-205ENST00000610828 CRPP02741 224 aa9.3□□□□□ -0.92
NEK3-205ENST00000610828 LYPD5Q6UWN5 251 aa9.3□□□□□ -0.92
NEK3-205ENST00000610828 Q6ZTC4 211 aa9.3□□□□□ -0.92
NEK3-205ENST00000610828 TRAV13-2A0A0B4J235 113 aa9.29□□□□□ -0.92
NEK3-205ENST00000610828 M0QXV9 152 aa9.29□□□□□ -0.92
NEK3-205ENST00000610828 KLK12Q9UKR0 248 aa9.29□□□□□ -0.92
NEK3-205ENST00000610828 IGKV2-28A0A075B6P5 120 aa9.29□□□□□ -0.92
NEK3-205ENST00000610828 IGKV2D-28P01615 120 aa9.29□□□□□ -0.92
NEK3-205ENST00000610828 LINC00337Q8N6G1 96 aa9.29□□□□□ -0.92
NEK3-205ENST00000610828 DNAH3Q8TD57 4116 aa9.28□□□□□ -0.92
NEK3-205ENST00000610828 KPRPQ5T749 579 aaPredicted RBP9.28□□□□□ -0.92
NEK3-205ENST00000610828 KIAA0087Q14695 138 aa9.28□□□□□ -0.92
NEK3-205ENST00000610828 NTN5Q8WTR8 489 aaPredicted RBP9.27□□□□□ -0.93
NEK3-205ENST00000610828 A0A0J9YWU9 116 aa9.27□□□□□ -0.93
NEK3-205ENST00000610828 CYSRT1A8MQ03 144 aa9.27□□□□□ -0.93
NEK3-205ENST00000610828 CDIP1Q9H305 208 aa9.27□□□□□ -0.93
NEK3-205ENST00000610828 TENM3Q9P273 2699 aa9.26□□□□□ -0.93
NEK3-205ENST00000610828 COL6A5A8TX70 2615 aa9.26□□□□□ -0.93
NEK3-205ENST00000610828 H3BNG1 76 aa9.26□□□□□ -0.93
NEK3-205ENST00000610828 PRR34Q9NV39 138 aa9.26□□□□□ -0.93
NEK3-205ENST00000610828 CXCL5P42830 114 aa9.25□□□□□ -0.93
NEK3-205ENST00000610828 BAHCC1Q9P281 2608 aa9.25□□□□□ -0.93
NEK3-205ENST00000610828 H3BT86 120 aa9.24□□□□□ -0.93
NEK3-205ENST00000610828 ENHOQ6UWT2 76 aa9.24□□□□□ -0.93
NEK3-205ENST00000610828 NOTCH1P46531 2555 aa9.24□□□□□ -0.93
NEK3-205ENST00000610828 TEX49A0A1B0GTD5 131 aa9.24□□□□□ -0.93
NEK3-205ENST00000610828 NANOS2P60321 138 aaKnown RBP9.24□□□□□ -0.93
NEK3-205ENST00000610828 WFDC10BQ8IUB3 73 aa9.24□□□□□ -0.93
NEK3-205ENST00000610828 LINC01600Q96MT4 127 aa9.24□□□□□ -0.93
NEK3-205ENST00000610828 RPL28P46779 137 aaKnown RBP9.23□□□□□ -0.93
NEK3-205ENST00000610828 C9orf116Q5BN46 136 aaPredicted RBP9.23□□□□□ -0.93
NEK3-205ENST00000610828 UBE2WQ96B02 151 aa9.23□□□□□ -0.93
NEK3-205ENST00000610828 PRB2P02812 416 aaPredicted RBP9.22□□□□□ -0.93
NEK3-205ENST00000610828 OR13C6PQ8NH95 151 aa9.22□□□□□ -0.93
NEK3-205ENST00000610828 C11orf45Q8TAV5 145 aa9.22□□□□□ -0.93
NEK3-205ENST00000610828 LINC00526Q96FQ7 95 aa9.22□□□□□ -0.93
NEK3-205ENST00000610828 SCGB1A1P11684 91 aa9.22□□□□□ -0.93
NEK3-205ENST00000610828 SPAG11BQ08648 103 aa9.22□□□□□ -0.93
NEK3-205ENST00000610828 COX17Q14061 63 aa9.22□□□□□ -0.93
NEK3-205ENST00000610828 C6orf223Q8N319 242 aa9.22□□□□□ -0.93
NEK3-205ENST00000610828 SMIM11BQ8TCY0 68 aa9.22□□□□□ -0.93
NEK3-205ENST00000610828 DEFB131BA0A096LNP1 70 aa9.21□□□□□ -0.93
NEK3-205ENST00000610828 XGP55808 180 aa9.21□□□□□ -0.93
NEK3-205ENST00000610828 FAM218AQ96MZ4 157 aa9.21□□□□□ -0.93
NEK3-205ENST00000610828 KLK5Q9Y337 293 aaPredicted RBP9.21□□□□□ -0.93
NEK3-205ENST00000610828 MT-ATP8P03928 68 aa9.21□□□□□ -0.94
NEK3-205ENST00000610828 A0A1B0GV72 72 aa9.2□□□□□ -0.94
NEK3-205ENST00000610828 ESRGQ1W209 222 aa9.2□□□□□ -0.94
NEK3-205ENST00000610828 TRAV8-4A0A0B4J246 113 aa9.19□□□□□ -0.94
NEK3-205ENST00000610828 TRACP01848 142 aa9.19□□□□□ -0.94
NEK3-205ENST00000610828 C10orf25Q5T742 122 aa9.19□□□□□ -0.94
NEK3-205ENST00000610828 UNQ6190/PRO20217Q6UXQ8 127 aa9.19□□□□□ -0.94
NEK3-205ENST00000610828 PRR3P79522 188 aaKnown RBP9.18□□□□□ -0.94
NEK3-205ENST00000610828 NBEAL1Q6ZS30 2694 aa9.17□□□□□ -0.94
NEK3-205ENST00000610828 MRAPQ8TCY5 172 aa9.16□□□□□ -0.94
NEK3-205ENST00000610828 Q9HAA7 133 aa9.16□□□□□ -0.94
NEK3-205ENST00000610828 A0A087WYN8 130 aa9.15□□□□□ -0.95
NEK3-205ENST00000610828 H0YGX0 51 aa9.15□□□□□ -0.95
NEK3-205ENST00000610828 NDUFC2O95298 119 aa9.15□□□□□ -0.95
NEK3-205ENST00000610828 BAALC-AS2P0C853 105 aa9.15□□□□□ -0.95
NEK3-205ENST00000610828 DEFB121Q5J5C9 76 aa9.15□□□□□ -0.95
NEK3-205ENST00000610828 DNAL4O96015 105 aa9.14□□□□□ -0.95
NEK3-205ENST00000610828 K7EIL1 84 aa9.13□□□□□ -0.95
NEK3-205ENST00000610828 NCR3O14931 201 aa9.13□□□□□ -0.95
NEK3-205ENST00000610828 HIGD2BQ4VC39 106 aa9.13□□□□□ -0.95
NEK3-205ENST00000610828 Q8NDZ9 215 aa9.13□□□□□ -0.95
NEK3-205ENST00000610828 HUWE1Q7Z6Z7 4374 aaKnown RBP9.12□□□□□ -0.95
NEK3-205ENST00000610828 ZNF561-AS1K7EIQ3 104 aa9.12□□□□□ -0.95
NEK3-205ENST00000610828 LINC01556Q5JQF7 62 aa9.12□□□□□ -0.95
NEK3-205ENST00000610828 TM2D3Q9BRN9 247 aa9.12□□□□□ -0.95
NEK3-205ENST00000610828 TMEM126AQ9H061 195 aa9.12□□□□□ -0.95
NEK3-205ENST00000610828 LECT2O14960 151 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms