RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ANKRD29Q8N6D5 301 aa10.93□□□□□ -0.66
CTSA-214ENST00000606788 REG3AQ06141 175 aa10.93□□□□□ -0.66
CTSA-214ENST00000606788 CHCHD10Q8WYQ3 142 aaPredicted RBP10.92□□□□□ -0.66
CTSA-214ENST00000606788 A0A087WZ39 114 aa10.92□□□□□ -0.66
CTSA-214ENST00000606788 FAM19A3Q7Z5A8 133 aa10.92□□□□□ -0.66
CTSA-214ENST00000606788 TRBV20-1A0A075B6N2 111 aa10.91□□□□□ -0.66
CTSA-214ENST00000606788 PRR3P79522 188 aaKnown RBP10.9□□□□□ -0.66
CTSA-214ENST00000606788 MALP21145 153 aa10.9□□□□□ -0.66
CTSA-214ENST00000606788 NANOS2P60321 138 aaKnown RBP10.9□□□□□ -0.66
CTSA-214ENST00000606788 MRPL23Q16540 153 aaKnown RBP10.9□□□□□ -0.66
CTSA-214ENST00000606788 LINC01620Q4KN68 170 aa10.9□□□□□ -0.66
CTSA-214ENST00000606788 TIMM17BO60830 172 aa10.9□□□□□ -0.67
CTSA-214ENST00000606788 CARD19Q96LW7 228 aa10.9□□□□□ -0.67
CTSA-214ENST00000606788 CMYA5Q8N3K9 4069 aa10.89□□□□□ -0.67
CTSA-214ENST00000606788 A0A0J9YWU9 116 aa10.89□□□□□ -0.67
CTSA-214ENST00000606788 IFITM1P13164 125 aa10.89□□□□□ -0.67
CTSA-214ENST00000606788 C6orf223Q8N319 242 aa10.89□□□□□ -0.67
CTSA-214ENST00000606788 OR13C6PQ8NH95 151 aa10.89□□□□□ -0.67
CTSA-214ENST00000606788 SND1-IT1Q9HBX3 110 aa10.89□□□□□ -0.67
CTSA-214ENST00000606788 FOXI1Q12951 378 aa10.89□□□□□ -0.67
CTSA-214ENST00000606788 NTN5Q8WTR8 489 aaPredicted RBP10.89□□□□□ -0.67
CTSA-214ENST00000606788 ATXN8Q156A1 80 aa10.88□□□□□ -0.67
CTSA-214ENST00000606788 COX6CP09669 75 aa10.88□□□□□ -0.67
CTSA-214ENST00000606788 UBE2WQ96B02 151 aa10.88□□□□□ -0.67
CTSA-214ENST00000606788 STAB2Q8WWQ8 2551 aa10.88□□□□□ -0.67
CTSA-214ENST00000606788 CKS1BP61024 79 aa10.88□□□□□ -0.67
CTSA-214ENST00000606788 HERV-K104P63124 156 aa10.88□□□□□ -0.67
CTSA-214ENST00000606788 TRBV30A0A0K0K1B3 111 aa10.87□□□□□ -0.67
CTSA-214ENST00000606788 CCL18P55774 89 aa10.87□□□□□ -0.67
CTSA-214ENST00000606788 DEFB121Q5J5C9 76 aa10.87□□□□□ -0.67
CTSA-214ENST00000606788 WFDC10BQ8IUB3 73 aa10.87□□□□□ -0.67
CTSA-214ENST00000606788 LINC00337Q8N6G1 96 aa10.87□□□□□ -0.67
CTSA-214ENST00000606788 TEX49A0A1B0GTD5 131 aa10.87□□□□□ -0.67
CTSA-214ENST00000606788 A0A1B0GUV1 79 aa10.87□□□□□ -0.67
CTSA-214ENST00000606788 COX7A2LO14548 114 aa10.86□□□□□ -0.67
CTSA-214ENST00000606788 KPRPQ5T749 579 aaPredicted RBP10.86□□□□□ -0.67
CTSA-214ENST00000606788 A0A1B0GV72 72 aa10.86□□□□□ -0.67
CTSA-214ENST00000606788 GAGE12HA6NDE8 117 aa10.86□□□□□ -0.67
CTSA-214ENST00000606788 TEN1Q86WV5 123 aa10.86□□□□□ -0.67
CTSA-214ENST00000606788 J3QR89 54 aa10.85□□□□□ -0.67
CTSA-214ENST00000606788 IGKV2-28A0A075B6P5 120 aa10.84□□□□□ -0.67
CTSA-214ENST00000606788 IGKV2D-28P01615 120 aa10.84□□□□□ -0.67
CTSA-214ENST00000606788 CRPP02741 224 aa10.83□□□□□ -0.68
CTSA-214ENST00000606788 CFAP161Q6P656 301 aa10.83□□□□□ -0.68
CTSA-214ENST00000606788 LYPD5Q6UWN5 251 aa10.83□□□□□ -0.68
CTSA-214ENST00000606788 Q9HAA7 133 aa10.83□□□□□ -0.68
CTSA-214ENST00000606788 C10orf25Q5T742 122 aa10.83□□□□□ -0.68
CTSA-214ENST00000606788 FAM218AQ96MZ4 157 aa10.82□□□□□ -0.68
CTSA-214ENST00000606788 WIPF1O43516 503 aa10.82□□□□□ -0.68
CTSA-214ENST00000606788 SHISA2Q6UWI4 295 aa10.82□□□□□ -0.68
CTSA-214ENST00000606788 CD164L2Q6UWJ8 174 aa10.82□□□□□ -0.68
CTSA-214ENST00000606788 LELP1Q5T871 98 aa10.81□□□□□ -0.68
CTSA-214ENST00000606788 UNQ6190/PRO20217Q6UXQ8 127 aa10.81□□□□□ -0.68
CTSA-214ENST00000606788 HIGD2BQ4VC39 106 aa10.81□□□□□ -0.68
CTSA-214ENST00000606788 PPDPFLQ8WWR9 84 aa10.81□□□□□ -0.68
CTSA-214ENST00000606788 TENM2Q9NT68 2774 aa10.79□□□□□ -0.68
CTSA-214ENST00000606788 ENHOQ6UWT2 76 aa10.79□□□□□ -0.68
CTSA-214ENST00000606788 IBA57-AS1B1ANH7 110 aa10.78□□□□□ -0.68
CTSA-214ENST00000606788 LST1O00453 97 aa10.78□□□□□ -0.68
CTSA-214ENST00000606788 DEFB131BA0A096LNP1 70 aa10.78□□□□□ -0.68
CTSA-214ENST00000606788 TRAV8-4A0A0B4J246 113 aa10.78□□□□□ -0.68
CTSA-214ENST00000606788 TRBV10-2A0A0K0K1G8 114 aa10.78□□□□□ -0.68
CTSA-214ENST00000606788 SPAG11BQ08648 103 aa10.78□□□□□ -0.68
CTSA-214ENST00000606788 C11orf45Q8TAV5 145 aa10.78□□□□□ -0.68
CTSA-214ENST00000606788 SMIM11BQ8TCY0 68 aa10.78□□□□□ -0.68
CTSA-214ENST00000606788 KIAA0087Q14695 138 aa10.78□□□□□ -0.68
CTSA-214ENST00000606788 ESRGQ1W209 222 aa10.77□□□□□ -0.68
CTSA-214ENST00000606788 Q8IZM0 81 aa10.77□□□□□ -0.68
CTSA-214ENST00000606788 NCR3O14931 201 aa10.76□□□□□ -0.69
CTSA-214ENST00000606788 EGFEM1PQ0D2K5 195 aa10.76□□□□□ -0.69
CTSA-214ENST00000606788 COPS9Q8WXC6 57 aa10.76□□□□□ -0.69
CTSA-214ENST00000606788 SLPIP03973 132 aa10.76□□□□□ -0.69
CTSA-214ENST00000606788 Q8NDZ9 215 aa10.75□□□□□ -0.69
CTSA-214ENST00000606788 XAGE1AQ9HD64 81 aa10.75□□□□□ -0.69
CTSA-214ENST00000606788 SIGMAR1Q99720 223 aa10.75□□□□□ -0.69
CTSA-214ENST00000606788 A0A087WYN8 130 aa10.74□□□□□ -0.69
CTSA-214ENST00000606788 MT-ATP8P03928 68 aa10.74□□□□□ -0.69
CTSA-214ENST00000606788 CDIP1Q9H305 208 aa10.74□□□□□ -0.69
CTSA-214ENST00000606788 TRAV13-2A0A0B4J235 113 aa10.73□□□□□ -0.69
CTSA-214ENST00000606788 COL7A1Q02388 2944 aa10.73□□□□□ -0.69
CTSA-214ENST00000606788 XGP55808 180 aa10.72□□□□□ -0.69
CTSA-214ENST00000606788 IGKV2D-24A0A075B6R9 120 aa10.71□□□□□ -0.7
CTSA-214ENST00000606788 LECT2O14960 151 aa10.7□□□□□ -0.7
CTSA-214ENST00000606788 BAALC-AS2P0C853 105 aa10.7□□□□□ -0.7
CTSA-214ENST00000606788 K7EIL1 84 aa10.69□□□□□ -0.7
CTSA-214ENST00000606788 SPATA25Q9BR10 227 aa10.69□□□□□ -0.7
CTSA-214ENST00000606788 LYSTQ99698 3801 aa10.68□□□□□ -0.7
CTSA-214ENST00000606788 PRR34Q9NV39 138 aa10.68□□□□□ -0.7
CTSA-214ENST00000606788 CSMD3Q7Z407 3707 aa10.67□□□□□ -0.7
CTSA-214ENST00000606788 RPL28P46779 137 aaKnown RBP10.66□□□□□ -0.7
CTSA-214ENST00000606788 RPL18AQ02543 176 aaKnown RBP10.66□□□□□ -0.7
CTSA-214ENST00000606788 C9orf129Q5T035 196 aaKnown RBP10.66□□□□□ -0.7
CTSA-214ENST00000606788 HUWE1Q7Z6Z7 4374 aaKnown RBP10.66□□□□□ -0.7
CTSA-214ENST00000606788 DNAL4O96015 105 aa10.66□□□□□ -0.7
CTSA-214ENST00000606788 ZNF561-AS1K7EIQ3 104 aa10.66□□□□□ -0.7
CTSA-214ENST00000606788 GAGE2EQ4V326 116 aa10.66□□□□□ -0.7
CTSA-214ENST00000606788 GAGE2DQ9UEU5 116 aa10.66□□□□□ -0.7
CTSA-214ENST00000606788 MDFIQ99750 246 aa10.65□□□□□ -0.7
CTSA-214ENST00000606788 H3BT86 120 aa10.65□□□□□ -0.7
CTSA-214ENST00000606788 C6orf48Q9UBA6 75 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms