RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 LRP1Q07954 4544 aaKnown RBP8.51□□□□□ -1.05
CTSA-213ENST00000606782 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.5□□□□□ -1.05
CTSA-213ENST00000606782 F8VRH5 84 aa8.5□□□□□ -1.05
CTSA-213ENST00000606782 SYS1-DBNDD2H3BUS1 97 aa8.5□□□□□ -1.05
CTSA-213ENST00000606782 APOMO95445 188 aa8.5□□□□□ -1.05
CTSA-213ENST00000606782 MRPL35Q9NZE8 188 aaKnown RBP8.5□□□□□ -1.05
CTSA-213ENST00000606782 C11orf86A6NJI1 115 aa8.49□□□□□ -1.05
CTSA-213ENST00000606782 C3orf79P0CE67 100 aa8.49□□□□□ -1.05
CTSA-213ENST00000606782 PET117Q6UWS5 81 aa8.49□□□□□ -1.05
CTSA-213ENST00000606782 LINC00469Q8N7U9 141 aa8.49□□□□□ -1.05
CTSA-213ENST00000606782 HIST1H2BLQ99880 126 aa8.49□□□□□ -1.05
CTSA-213ENST00000606782 PKHD1L1Q86WI1 4243 aa8.49□□□□□ -1.05
CTSA-213ENST00000606782 H0Y8G0 127 aa8.48□□□□□ -1.05
CTSA-213ENST00000606782 ZNF22P17026 224 aaPredicted RBP8.48□□□□□ -1.05
CTSA-213ENST00000606782 S100A2P29034 98 aa8.48□□□□□ -1.05
CTSA-213ENST00000606782 HNRNPA3P51991 378 aaKnown RBP8.48□□□□□ -1.05
CTSA-213ENST00000606782 KIAA0087Q14695 138 aa8.48□□□□□ -1.05
CTSA-213ENST00000606782 HIGD2BQ4VC39 106 aa8.48□□□□□ -1.05
CTSA-213ENST00000606782 OR10D4PQ8NGN7 298 aa8.48□□□□□ -1.05
CTSA-213ENST00000606782 SPACA4Q8TDM5 124 aa8.47□□□□□ -1.05
CTSA-213ENST00000606782 A0A087WYN8 130 aa8.46□□□□□ -1.06
CTSA-213ENST00000606782 SMIM1B2RUZ4 78 aa8.46□□□□□ -1.06
CTSA-213ENST00000606782 H3BRM9 83 aa8.46□□□□□ -1.06
CTSA-213ENST00000606782 ZNF561-AS1K7EIQ3 104 aa8.46□□□□□ -1.06
CTSA-213ENST00000606782 SERTAD4-AS1Q5TG53 156 aa8.46□□□□□ -1.06
CTSA-213ENST00000606782 LINC01545Q5VT33 79 aa8.46□□□□□ -1.06
CTSA-213ENST00000606782 ORAOV1Q8WV07 137 aa8.46□□□□□ -1.06
CTSA-213ENST00000606782 C2orf48Q96LS8 159 aa8.46□□□□□ -1.06
CTSA-213ENST00000606782 PLAC8Q9NZF1 115 aa8.46□□□□□ -1.06
CTSA-213ENST00000606782 FAT3Q8TDW7 4589 aa8.45□□□□□ -1.06
CTSA-213ENST00000606782 F8WDY8 70 aa8.45□□□□□ -1.06
CTSA-213ENST00000606782 DPM2O94777 84 aa8.45□□□□□ -1.06
CTSA-213ENST00000606782 KRTDAPP60985 99 aa8.45□□□□□ -1.06
CTSA-213ENST00000606782 LINC00526Q96FQ7 95 aa8.45□□□□□ -1.06
CTSA-213ENST00000606782 IGLV5-39A0A0G2JS06 123 aa8.44□□□□□ -1.06
CTSA-213ENST00000606782 TMEM223A0PJW6 202 aa8.44□□□□□ -1.06
CTSA-213ENST00000606782 IGKCP01834 107 aa8.44□□□□□ -1.06
CTSA-213ENST00000606782 SPINK8P0C7L1 97 aa8.44□□□□□ -1.06
CTSA-213ENST00000606782 CHTF8P0CG12 524 aa8.44□□□□□ -1.06
CTSA-213ENST00000606782 PLNP26678 52 aa8.44□□□□□ -1.06
CTSA-213ENST00000606782 SPAG11BQ08648 103 aa8.44□□□□□ -1.06
CTSA-213ENST00000606782 TMEM170BQ5T4T1 132 aa8.44□□□□□ -1.06
CTSA-213ENST00000606782 Q8IZM0 81 aa8.44□□□□□ -1.06
CTSA-213ENST00000606782 PMCHL2Q9BQD1 86 aa8.44□□□□□ -1.06
CTSA-213ENST00000606782 Q6ZRU5 148 aa8.43□□□□□ -1.06
CTSA-213ENST00000606782 SYCNQ0VAF6 134 aa8.42□□□□□ -1.06
CTSA-213ENST00000606782 C6orf226Q5I0X4 101 aa8.42□□□□□ -1.06
CTSA-213ENST00000606782 DPH3Q96FX2 82 aa8.42□□□□□ -1.06
CTSA-213ENST00000606782 PRSS2P07478 247 aa8.41□□□□□ -1.06
CTSA-213ENST00000606782 RNF151Q2KHN1 245 aa8.41□□□□□ -1.06
CTSA-213ENST00000606782 COX7B2Q8TF08 81 aa8.41□□□□□ -1.06
CTSA-213ENST00000606782 CAMK2N2Q96S95 79 aa8.41□□□□□ -1.06
CTSA-213ENST00000606782 TOMM7Q9P0U1 55 aa8.41□□□□□ -1.06
CTSA-213ENST00000606782 TMA7Q9Y2S6 64 aaKnown RBP8.41□□□□□ -1.06
CTSA-213ENST00000606782 UNQ6190/PRO20217Q6UXQ8 127 aa8.4□□□□□ -1.06
CTSA-213ENST00000606782 NDUFA1O15239 70 aa8.39□□□□□ -1.07
CTSA-213ENST00000606782 MT1HL1P0DM35 61 aa8.39□□□□□ -1.07
CTSA-213ENST00000606782 C10orf25Q5T742 122 aa8.39□□□□□ -1.07
CTSA-213ENST00000606782 C2orf82Q6UX34 121 aa8.39□□□□□ -1.07
CTSA-213ENST00000606782 CARD19Q96LW7 228 aa8.39□□□□□ -1.07
CTSA-213ENST00000606782 C20orf202A1L168 122 aa8.38□□□□□ -1.07
CTSA-213ENST00000606782 CXCL5P42830 114 aa8.38□□□□□ -1.07
CTSA-213ENST00000606782 AKR1D1P51857 326 aa8.38□□□□□ -1.07
CTSA-213ENST00000606782 CKS1BP61024 79 aa8.38□□□□□ -1.07
CTSA-213ENST00000606782 LINC00474Q9P2X8 69 aa8.38□□□□□ -1.07
CTSA-213ENST00000606782 PKIGQ9Y2B9 76 aa8.38□□□□□ -1.07
CTSA-213ENST00000606782 TRBV30A0A0K0K1B3 111 aa8.37□□□□□ -1.07
CTSA-213ENST00000606782 LEPROTO15243 131 aa8.37□□□□□ -1.07
CTSA-213ENST00000606782 MAJINQ3KP22 176 aa8.37□□□□□ -1.07
CTSA-213ENST00000606782 C7orf33Q8WU49 177 aa8.37□□□□□ -1.07
CTSA-213ENST00000606782 A0A096LNI7 61 aa8.36□□□□□ -1.07
CTSA-213ENST00000606782 IGKV2-24A0A0C4DH68 120 aa8.36□□□□□ -1.07
CTSA-213ENST00000606782 HERVK_113P61574 105 aa8.36□□□□□ -1.07
CTSA-213ENST00000606782 STPG4Q8N801 248 aa8.36□□□□□ -1.07
CTSA-213ENST00000606782 C6orf48Q9UBA6 75 aa8.36□□□□□ -1.07
CTSA-213ENST00000606782 E9PLD3 99 aa8.35□□□□□ -1.07
CTSA-213ENST00000606782 PLEKHB2Q96CS7 222 aa8.35□□□□□ -1.07
CTSA-213ENST00000606782 HMCN2Q8NDA2 5059 aa8.34□□□□□ -1.07
CTSA-213ENST00000606782 TLX1NBP0CAT3 122 aa8.34□□□□□ -1.07
CTSA-213ENST00000606782 ZNF625Q96I27 306 aaPredicted RBP8.34□□□□□ -1.07
CTSA-213ENST00000606782 J3QQQ9 107 aa8.33□□□□□ -1.08
CTSA-213ENST00000606782 SCGB1D1O95968 90 aa8.33□□□□□ -1.08
CTSA-213ENST00000606782 PRR3P79522 188 aaKnown RBP8.33□□□□□ -1.08
CTSA-213ENST00000606782 C9orf116Q5BN46 136 aaPredicted RBP8.33□□□□□ -1.08
CTSA-213ENST00000606782 SFTA2Q6UW10 78 aa8.33□□□□□ -1.08
CTSA-213ENST00000606782 PLA2G2DQ9UNK4 145 aa8.33□□□□□ -1.08
CTSA-213ENST00000606782 LOC107984640A0A0U1RRK4 108 aa8.32□□□□□ -1.08
CTSA-213ENST00000606782 TSPEAR-AS2P59090 65 aa8.32□□□□□ -1.08
CTSA-213ENST00000606782 JOSD1Q15040 202 aaPredicted RBP8.32□□□□□ -1.08
CTSA-213ENST00000606782 ATOH7Q8N100 152 aa8.32□□□□□ -1.08
CTSA-213ENST00000606782 NDUFC2-KCTD14E9PQ53 114 aa8.31□□□□□ -1.08
CTSA-213ENST00000606782 NDUFA12Q9UI09 145 aa8.31□□□□□ -1.08
CTSA-213ENST00000606782 IGKV2D-26A0A0A0MRZ7 120 aa8.3□□□□□ -1.08
CTSA-213ENST00000606782 NMUP48645 174 aa8.3□□□□□ -1.08
CTSA-213ENST00000606782 PTTG1IPP53801 180 aa8.3□□□□□ -1.08
CTSA-213ENST00000606782 HERV-K104P63124 156 aa8.3□□□□□ -1.08
CTSA-213ENST00000606782 Q6ZRP5 223 aa8.3□□□□□ -1.08
CTSA-213ENST00000606782 LINC01600Q96MT4 127 aa8.3□□□□□ -1.08
CTSA-213ENST00000606782 MYMXA0A1B0GTQ4 84 aa8.29□□□□□ -1.08
CTSA-213ENST00000606782 LGALS3P17931 250 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms