RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 COX17Q14061 63 aa8.24□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 TOMM7Q9P0U1 55 aa8.24□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 MEGF8Q7Z7M0 2845 aa8.24□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 PRKDCP78527 4128 aaKnown RBP8.23□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 GVQW2A0A096LPI5 108 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 SMIM13P0DJ93 91 aa8.22□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 CKS1BP61024 79 aa8.22□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 TTC32Q5I0X7 151 aa8.22□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 MEIG1Q5JSS6 88 aa8.22□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 UBE2DNLQ8IWF7 75 aa8.22□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 A0A0B4J2C4 111 aa8.21□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 TAX1BP3O14907 124 aa8.21□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 SPAG11BQ08648 103 aa8.21□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 C2orf48Q96LS8 159 aa8.21□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 DYNC2H1Q8NCM8 4307 aaKnown RBP8.21□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 ADAMTSL4-AS1Q5T5F5 129 aa8.2□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 NTN5Q8WTR8 489 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 NHP2Q9NX24 153 aaKnown RBP8.2□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 ERG28Q9UKR5 140 aa8.2□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 IGKV2D-24A0A075B6R9 120 aa8.19□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 LOC107984156A0A0G2JMH3 177 aa8.19□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 TRBV30A0A0K0K1B3 111 aa8.19□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 MUSTN1Q8IVN3 82 aa8.19□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 ARL17AQ8IVW1 177 aa8.19□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 LINC00308Q8TCZ7 52 aa8.19□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 C9orf118A6NHY6 69 aa8.18□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 A4D1N5 150 aa8.17□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 ZNF561-AS1K7EIQ3 104 aa8.17□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 C15orf56Q8N910 161 aa8.17□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 WWC2-AS2Q96NR7 200 aa8.17□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 CFC1BP0CG36 223 aa8.16□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 CFC1P0CG37 223 aa8.16□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 DNAH7Q8WXX0 4024 aa8.15□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 LINC00158P58513 81 aa8.15□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 RNF151Q2KHN1 245 aa8.15□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 C2orf82Q6UX34 121 aa8.15□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 MIR7-3HGQ8N6C7 128 aa8.15□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 Q9HAA7 133 aa8.15□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 PRO1854Q9UHT4 67 aa8.15□□□□□ -1.1
NEDD8-MDP1-203ENST00000604306 A0A1B0GV90 55 aa8.14□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 NBDYA0A0U1RRE5 68 aa8.13□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 LYRM7Q5U5X0 104 aa8.13□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 RAB37Q96AX2 223 aa8.13□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 FBN3Q75N90 2809 aa8.13□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 K7ERJ3 54 aa8.12□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 NDUFC2O95298 119 aa8.12□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 SOSTDC1Q6X4U4 206 aa8.12□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 DAND5Q8N907 189 aa8.12□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 CSMD3Q7Z407 3707 aa8.12□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 A0A1W2PPM0 123 aa8.11□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 C3orf84H3BNL1 204 aa8.11□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 PFN2P35080 140 aa8.11□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 C14orf177Q52M58 125 aa8.11□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 UNQ6190/PRO20217Q6UXQ8 127 aa8.11□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 KRTAP1-5Q9BYS1 174 aa8.11□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 C6orf48Q9UBA6 75 aa8.11□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 TRAV13-2A0A0B4J235 113 aa8.1□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 USP17L23D6RBM5 183 aa8.1□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 H3BUT2 72 aa8.1□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 TLX1NBP0CAT3 122 aa8.1□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 FABP2P12104 132 aa8.1□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 C6orf223Q8N319 242 aa8.1□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 SND1-IT1Q9HBX3 110 aa8.1□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 A0A0U1RRA0 63 aa8.09□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 TSPAN13O95857 204 aa8.09□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 SYCNQ0VAF6 134 aa8.09□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 HIGD2BQ4VC39 106 aa8.09□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 C10orf25Q5T742 122 aa8.09□□□□□ -1.11
NEDD8-MDP1-203ENST00000604306 NDUFC2-KCTD14E9PQ53 114 aa8.08□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 EIF4EBP3O60516 100 aaPredicted RBP8.08□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 NPC2P61916 151 aa8.08□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 Q6ZRU5 148 aa8.08□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 GTF2H5Q6ZYL4 71 aa8.08□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 CARD19Q96LW7 228 aa8.07□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 PKIGQ9Y2B9 76 aa8.07□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 PSCAO43653 123 aa8.06□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 CNBPP62633 177 aaKnown RBP8.06□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 VAMP3Q15836 100 aa8.06□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 LINC00526Q96FQ7 95 aa8.06□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 STARD9Q9P2P6 4700 aa8.05□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 DNAH1Q9P2D7 4330 aa8.05□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 TRBV20-1A0A075B6N2 111 aa8.05□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 TRBV10-2A0A0K0K1G8 114 aa8.05□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 K7EP34 96 aa8.05□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 UBE2V1Q13404 147 aa8.05□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 C9orf116Q5BN46 136 aaPredicted RBP8.05□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 CASC10Q5T4H9 136 aa8.05□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 Q6ZR54 194 aa8.05□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 Q6ZRN7 208 aaPredicted RBP8.05□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 IGKV2-28A0A075B6P5 120 aa8.04□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 IGKV2D-28P01615 120 aa8.04□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 COX6CP09669 75 aa8.04□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 RPL13AP40429 203 aaKnown RBP8.04□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 GAGE10A6NGK3 116 aa8.03□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 Q1RN00 199 aa8.03□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 SPCS1Q9Y6A9 102 aa8.03□□□□□ -1.12
NEDD8-MDP1-203ENST00000604306 PLECQ15149 4684 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms