RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 PACRGQ96M98 296 aaPredicted RBP10.49□□□□□ -0.73
SSBP4-213ENST00000602088 TOMM7Q9P0U1 55 aa10.49□□□□□ -0.73
SSBP4-213ENST00000602088 A0A1W2PNN7 141 aa10.48□□□□□ -0.73
SSBP4-213ENST00000602088 TRGC2P03986 189 aa10.47□□□□□ -0.73
SSBP4-213ENST00000602088 HNRNPA3P51991 378 aaKnown RBP10.47□□□□□ -0.73
SSBP4-213ENST00000602088 CKS1BP61024 79 aa10.47□□□□□ -0.73
SSBP4-213ENST00000602088 Q6ZRP5 223 aa10.47□□□□□ -0.73
SSBP4-213ENST00000602088 CHCHD1Q96BP2 118 aaKnown RBP10.47□□□□□ -0.73
SSBP4-213ENST00000602088 SMIM1B2RUZ4 78 aa10.46□□□□□ -0.73
SSBP4-213ENST00000602088 ATP5LO75964 103 aa10.45□□□□□ -0.74
SSBP4-213ENST00000602088 NDUFA6P56556 154 aa10.45□□□□□ -0.74
SSBP4-213ENST00000602088 C9orf116Q5BN46 136 aaPredicted RBP10.45□□□□□ -0.74
SSBP4-213ENST00000602088 COLCA2A8K830 154 aa10.44□□□□□ -0.74
SSBP4-213ENST00000602088 NDUFC2-KCTD14E9PQ53 114 aa10.44□□□□□ -0.74
SSBP4-213ENST00000602088 IGLC3P0DOY3 106 aa10.44□□□□□ -0.74
SSBP4-213ENST00000602088 KRTAP29-1A8MX34 341 aaPredicted RBP10.43□□□□□ -0.74
SSBP4-213ENST00000602088 GAGE2EQ4V326 116 aa10.43□□□□□ -0.74
SSBP4-213ENST00000602088 GAGE2DQ9UEU5 116 aa10.43□□□□□ -0.74
SSBP4-213ENST00000602088 F8VRH5 84 aa10.42□□□□□ -0.74
SSBP4-213ENST00000602088 SPINK8P0C7L1 97 aa10.42□□□□□ -0.74
SSBP4-213ENST00000602088 BAGE3Q86Y29 109 aa10.42□□□□□ -0.74
SSBP4-213ENST00000602088 COX7B2Q8TF08 81 aa10.42□□□□□ -0.74
SSBP4-213ENST00000602088 LRP1Q07954 4544 aaKnown RBP10.42□□□□□ -0.74
SSBP4-213ENST00000602088 PKHD1L1Q86WI1 4243 aa10.42□□□□□ -0.74
SSBP4-213ENST00000602088 HERC1Q15751 4861 aa10.42□□□□□ -0.74
SSBP4-213ENST00000602088 H3BRM9 83 aa10.41□□□□□ -0.74
SSBP4-213ENST00000602088 CXCL5P42830 114 aa10.41□□□□□ -0.74
SSBP4-213ENST00000602088 PRR3P79522 188 aaKnown RBP10.41□□□□□ -0.74
SSBP4-213ENST00000602088 FAM168BA1KXE4 195 aa10.4□□□□□ -0.74
SSBP4-213ENST00000602088 HSBP1O75506 76 aa10.4□□□□□ -0.74
SSBP4-213ENST00000602088 ZNF22P17026 224 aaPredicted RBP10.4□□□□□ -0.74
SSBP4-213ENST00000602088 OXTP01178 125 aa10.39□□□□□ -0.75
SSBP4-213ENST00000602088 FAM19A2Q8N3H0 131 aa10.39□□□□□ -0.75
SSBP4-213ENST00000602088 IGLV5-39A0A0G2JS06 123 aa10.38□□□□□ -0.75
SSBP4-213ENST00000602088 J3QL48 77 aa10.38□□□□□ -0.75
SSBP4-213ENST00000602088 C9orf129Q5T035 196 aaKnown RBP10.38□□□□□ -0.75
SSBP4-213ENST00000602088 PHF5AQ7RTV0 110 aaKnown RBP10.38□□□□□ -0.75
SSBP4-213ENST00000602088 IFI27L1Q96BM0 104 aa10.38□□□□□ -0.75
SSBP4-213ENST00000602088 C11orf86A6NJI1 115 aa10.37□□□□□ -0.75
SSBP4-213ENST00000602088 LINC00310P59036 64 aa10.37□□□□□ -0.75
SSBP4-213ENST00000602088 KRTAP7-1Q8IUC3 87 aa10.37□□□□□ -0.75
SSBP4-213ENST00000602088 FAT3Q8TDW7 4589 aa10.37□□□□□ -0.75
SSBP4-213ENST00000602088 TRAV12-1A0A0B4J245 112 aa10.36□□□□□ -0.75
SSBP4-213ENST00000602088 SCO1O75880 301 aa10.36□□□□□ -0.75
SSBP4-213ENST00000602088 SERF1AO75920 110 aa10.36□□□□□ -0.75
SSBP4-213ENST00000602088 FAM19A5Q7Z5A7 132 aaPredicted RBP10.36□□□□□ -0.75
SSBP4-213ENST00000602088 CHTOPQ9Y3Y2 248 aaKnown RBP10.36□□□□□ -0.75
SSBP4-213ENST00000602088 TMEM170BQ5T4T1 132 aa10.34□□□□□ -0.75
SSBP4-213ENST00000602088 PSORS1C2Q9UIG4 136 aa10.34□□□□□ -0.75
SSBP4-213ENST00000602088 NUPR1O60356 82 aa10.33□□□□□ -0.76
SSBP4-213ENST00000602088 XAGE1AQ9HD64 81 aa10.33□□□□□ -0.76
SSBP4-213ENST00000602088 M0QXV9 152 aa10.32□□□□□ -0.76
SSBP4-213ENST00000602088 SRSF9Q13242 221 aaKnown RBP eCLIP10.32□□□□□ -0.76
SSBP4-213ENST00000602088 LEPROTL1O95214 131 aa10.31□□□□□ -0.76
SSBP4-213ENST00000602088 KRTAP11-1Q8IUC1 163 aa10.31□□□□□ -0.76
SSBP4-213ENST00000602088 SERTAD4-AS1Q5TG53 156 aa10.3□□□□□ -0.76
SSBP4-213ENST00000602088 SPINK6Q6UWN8 80 aa10.3□□□□□ -0.76
SSBP4-213ENST00000602088 TMEM223A0PJW6 202 aa10.29□□□□□ -0.76
SSBP4-213ENST00000602088 ODF1Q14990 250 aa10.29□□□□□ -0.76
SSBP4-213ENST00000602088 C1orf137Q5JT78 98 aa10.28□□□□□ -0.76
SSBP4-213ENST00000602088 C22orf24Q9Y442 160 aa10.28□□□□□ -0.76
SSBP4-213ENST00000602088 HIST1H2BKO60814 126 aa10.27□□□□□ -0.77
SSBP4-213ENST00000602088 HIST1H2BJP06899 126 aa10.27□□□□□ -0.77
SSBP4-213ENST00000602088 FABP4P15090 132 aa10.27□□□□□ -0.77
SSBP4-213ENST00000602088 HIST1H2BOP23527 126 aa10.27□□□□□ -0.77
SSBP4-213ENST00000602088 HIST1H2BBP33778 126 aa10.27□□□□□ -0.77
SSBP4-213ENST00000602088 HIST1H2BDP58876 126 aa10.27□□□□□ -0.77
SSBP4-213ENST00000602088 HIST1H2BCP62807 126 aa10.27□□□□□ -0.77
SSBP4-213ENST00000602088 HIST2H2BEQ16778 126 aa10.27□□□□□ -0.77
SSBP4-213ENST00000602088 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.27□□□□□ -0.77
SSBP4-213ENST00000602088 HIST1H2BHQ93079 126 aa10.27□□□□□ -0.77
SSBP4-213ENST00000602088 HIST1H2BNQ99877 126 aa10.27□□□□□ -0.77
SSBP4-213ENST00000602088 HIST1H2BMQ99879 126 aa10.27□□□□□ -0.77
SSBP4-213ENST00000602088 HSPB8Q9UJY1 196 aa10.27□□□□□ -0.77
SSBP4-213ENST00000602088 H0Y8G0 127 aa10.26□□□□□ -0.77
SSBP4-213ENST00000602088 UBE2BP63146 152 aa10.26□□□□□ -0.77
SSBP4-213ENST00000602088 ZNF625Q96I27 306 aaPredicted RBP10.26□□□□□ -0.77
SSBP4-213ENST00000602088 PLA2G2DQ9UNK4 145 aa10.26□□□□□ -0.77
SSBP4-213ENST00000602088 PFN2P35080 140 aa10.25□□□□□ -0.77
SSBP4-213ENST00000602088 COX17Q14061 63 aa10.25□□□□□ -0.77
SSBP4-213ENST00000602088 SFTA2Q6UW10 78 aa10.25□□□□□ -0.77
SSBP4-213ENST00000602088 ERG28Q9UKR5 140 aa10.25□□□□□ -0.77
SSBP4-213ENST00000602088 MT1HL1P0DM35 61 aa10.24□□□□□ -0.77
SSBP4-213ENST00000602088 LBHQ53QV2 105 aaPredicted RBP10.24□□□□□ -0.77
SSBP4-213ENST00000602088 TP73-AS1Q9UF72 201 aa10.24□□□□□ -0.77
SSBP4-213ENST00000602088 IGLV7-43P04211 117 aa10.23□□□□□ -0.77
SSBP4-213ENST00000602088 REG3GQ6UW15 175 aa10.22□□□□□ -0.77
SSBP4-213ENST00000602088 MRPL55Q7Z7F7 128 aaKnown RBP10.22□□□□□ -0.77
SSBP4-213ENST00000602088 LINC01600Q96MT4 127 aa10.22□□□□□ -0.77
SSBP4-213ENST00000602088 IGLV5-37A0A075B6J1 123 aa10.21□□□□□ -0.77
SSBP4-213ENST00000602088 PLNP26678 52 aa10.21□□□□□ -0.77
SSBP4-213ENST00000602088 SND1-IT1Q9HBX3 110 aa10.21□□□□□ -0.77
SSBP4-213ENST00000602088 DPM2O94777 84 aa10.2□□□□□ -0.78
SSBP4-213ENST00000602088 MAP1LC3CQ9BXW4 147 aa10.2□□□□□ -0.78
SSBP4-213ENST00000602088 LINC00167Q96N53 147 aa10.19□□□□□ -0.78
SSBP4-213ENST00000602088 PMCHL2Q9BQD1 86 aa10.18□□□□□ -0.78
SSBP4-213ENST00000602088 IGKCP01834 107 aa10.17□□□□□ -0.78
SSBP4-213ENST00000602088 LINC00158P58513 81 aa10.17□□□□□ -0.78
SSBP4-213ENST00000602088 NKAPP1Q8N9T2 125 aa10.17□□□□□ -0.78
SSBP4-213ENST00000602088 DIRC1Q969H9 104 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms