RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 IGKV2-24A0A0C4DH68 120 aa5.5□□□□□ -1.53
SSBP4-208ENST00000600628 LOC107984640A0A0U1RRK4 108 aa5.5□□□□□ -1.53
SSBP4-208ENST00000600628 PCP4L1A6NKN8 68 aa5.5□□□□□ -1.53
SSBP4-208ENST00000600628 SPAG11BQ08648 103 aa5.5□□□□□ -1.53
SSBP4-208ENST00000600628 PAPPA-AS1Q5QFB9 102 aa5.5□□□□□ -1.53
SSBP4-208ENST00000600628 HIST3H2BBQ8N257 126 aa5.5□□□□□ -1.53
SSBP4-208ENST00000600628 ORAOV1Q8WV07 137 aa5.5□□□□□ -1.53
SSBP4-208ENST00000600628 CDKN2A-AS1Q9UH64 79 aa5.5□□□□□ -1.53
SSBP4-208ENST00000600628 TINCRA0A1B0GVN0 87 aa5.49□□□□□ -1.53
SSBP4-208ENST00000600628 HERVK_113P63121 156 aa5.49□□□□□ -1.53
SSBP4-208ENST00000600628 ODF1Q14990 250 aa5.49□□□□□ -1.53
SSBP4-208ENST00000600628 MAJINQ3KP22 176 aa5.49□□□□□ -1.53
SSBP4-208ENST00000600628 UNQ6190/PRO20217Q6UXQ8 127 aa5.49□□□□□ -1.53
SSBP4-208ENST00000600628 Q6ZN92 141 aa5.49□□□□□ -1.53
SSBP4-208ENST00000600628 STPG4Q8N801 248 aa5.49□□□□□ -1.53
SSBP4-208ENST00000600628 CAMK2N2Q96S95 79 aa5.49□□□□□ -1.53
SSBP4-208ENST00000600628 C2orf88Q9BSF0 95 aa5.49□□□□□ -1.53
SSBP4-208ENST00000600628 CST9LQ9H4G1 147 aa5.49□□□□□ -1.53
SSBP4-208ENST00000600628 C6orf48Q9UBA6 75 aa5.49□□□□□ -1.53
SSBP4-208ENST00000600628 TRAPPC1Q9Y5R8 145 aa5.49□□□□□ -1.53
SSBP4-208ENST00000600628 A0A0J9YXV3 536 aa5.48□□□□□ -1.53
SSBP4-208ENST00000600628 TRBV30A0A0K0K1B3 111 aa5.48□□□□□ -1.53
SSBP4-208ENST00000600628 NDUFA1O15239 70 aa5.48□□□□□ -1.53
SSBP4-208ENST00000600628 LINC00614P0C842 121 aa5.48□□□□□ -1.53
SSBP4-208ENST00000600628 SEC11AP67812 179 aa5.48□□□□□ -1.53
SSBP4-208ENST00000600628 PDZD11Q5EBL8 140 aa5.48□□□□□ -1.53
SSBP4-208ENST00000600628 KRTAP7-1Q8IUC3 87 aa5.48□□□□□ -1.53
SSBP4-208ENST00000600628 Q8IZM0 81 aa5.48□□□□□ -1.53
SSBP4-208ENST00000600628 PACRGQ96M98 296 aaPredicted RBP5.48□□□□□ -1.53
SSBP4-208ENST00000600628 SCGB3A1Q96QR1 104 aa5.48□□□□□ -1.53
SSBP4-208ENST00000600628 A0A1W2PNN7 141 aa5.47□□□□□ -1.53
SSBP4-208ENST00000600628 SMIM1B2RUZ4 78 aa5.47□□□□□ -1.53
SSBP4-208ENST00000600628 OXTP01178 125 aa5.47□□□□□ -1.53
SSBP4-208ENST00000600628 FABP4P15090 132 aa5.47□□□□□ -1.53
SSBP4-208ENST00000600628 Q6ZRP5 223 aa5.47□□□□□ -1.53
SSBP4-208ENST00000600628 IGLV5-39A0A0G2JS06 123 aa5.46□□□□□ -1.54
SSBP4-208ENST00000600628 IGLC3P0DOY3 106 aa5.46□□□□□ -1.54
SSBP4-208ENST00000600628 PMVKQ15126 192 aa5.46□□□□□ -1.54
SSBP4-208ENST00000600628 C2orf82Q6UX34 121 aa5.46□□□□□ -1.54
SSBP4-208ENST00000600628 FA2HQ7L5A8 372 aa5.46□□□□□ -1.54
SSBP4-208ENST00000600628 C7orf33Q8WU49 177 aa5.46□□□□□ -1.54
SSBP4-208ENST00000600628 HIST1H2BLQ99880 126 aa5.46□□□□□ -1.54
SSBP4-208ENST00000600628 HMCN2Q8NDA2 5059 aa5.45□□□□□ -1.54
SSBP4-208ENST00000600628 TSTD3H0UI37 97 aa5.45□□□□□ -1.54
SSBP4-208ENST00000600628 LINC00310P59036 64 aa5.45□□□□□ -1.54
SSBP4-208ENST00000600628 PRR3P79522 188 aaKnown RBP5.45□□□□□ -1.54
SSBP4-208ENST00000600628 GAGE2BQ13066 116 aa5.45□□□□□ -1.54
SSBP4-208ENST00000600628 SRSF9Q13242 221 aaKnown RBP eCLIP5.45□□□□□ -1.54
SSBP4-208ENST00000600628 JOSD1Q15040 202 aaPredicted RBP5.45□□□□□ -1.54
SSBP4-208ENST00000600628 PYY3Q5JQD4 70 aa5.45□□□□□ -1.54
SSBP4-208ENST00000600628 NDUFC2-KCTD14E9PQ53 114 aa5.44□□□□□ -1.54
SSBP4-208ENST00000600628 HBDP02042 147 aa5.44□□□□□ -1.54
SSBP4-208ENST00000600628 MT1HL1P0DM35 61 aa5.44□□□□□ -1.54
SSBP4-208ENST00000600628 C9orf116Q5BN46 136 aaPredicted RBP5.44□□□□□ -1.54
SSBP4-208ENST00000600628 CTAG1AP78358 180 aa5.43□□□□□ -1.54
SSBP4-208ENST00000600628 C9orf129Q5T035 196 aaKnown RBP5.43□□□□□ -1.54
SSBP4-208ENST00000600628 BAGE3Q86Y29 109 aa5.43□□□□□ -1.54
SSBP4-208ENST00000600628 CHCHD1Q96BP2 118 aaKnown RBP5.43□□□□□ -1.54
SSBP4-208ENST00000600628 GEMIN7Q9H840 131 aaKnown RBP5.43□□□□□ -1.54
SSBP4-208ENST00000600628 F8VRH5 84 aa5.42□□□□□ -1.54
SSBP4-208ENST00000600628 ZNF22P17026 224 aaPredicted RBP5.42□□□□□ -1.54
SSBP4-208ENST00000600628 RPL18AQ02543 176 aaKnown RBP5.42□□□□□ -1.54
SSBP4-208ENST00000600628 PMCHL1Q16048 86 aa5.42□□□□□ -1.54
SSBP4-208ENST00000600628 LINC00469Q8N7U9 141 aa5.42□□□□□ -1.54
SSBP4-208ENST00000600628 TRAV12-1A0A0B4J245 112 aa5.41□□□□□ -1.54
SSBP4-208ENST00000600628 FAM168BA1KXE4 195 aa5.41□□□□□ -1.54
SSBP4-208ENST00000600628 ATP5LO75964 103 aa5.41□□□□□ -1.54
SSBP4-208ENST00000600628 CXCL5P42830 114 aa5.41□□□□□ -1.54
SSBP4-208ENST00000600628 C6orf226Q5I0X4 101 aa5.41□□□□□ -1.54
SSBP4-208ENST00000600628 KRTAP11-1Q8IUC1 163 aa5.41□□□□□ -1.54
SSBP4-208ENST00000600628 LINC00587B1AMM8 73 aa5.4□□□□□ -1.54
SSBP4-208ENST00000600628 COX7B2Q8TF08 81 aa5.4□□□□□ -1.54
SSBP4-208ENST00000600628 PSORS1C2Q9UIG4 136 aa5.4□□□□□ -1.54
SSBP4-208ENST00000600628 C11orf86A6NJI1 115 aa5.39□□□□□ -1.55
SSBP4-208ENST00000600628 SCGB1D1O95968 90 aa5.39□□□□□ -1.55
SSBP4-208ENST00000600628 SPINK8P0C7L1 97 aa5.39□□□□□ -1.55
SSBP4-208ENST00000600628 LBHQ53QV2 105 aaPredicted RBP5.39□□□□□ -1.55
SSBP4-208ENST00000600628 SERTAD4-AS1Q5TG53 156 aa5.39□□□□□ -1.55
SSBP4-208ENST00000600628 PHF5AQ7RTV0 110 aaKnown RBP5.39□□□□□ -1.55
SSBP4-208ENST00000600628 H3BRM9 83 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 NUPR1O60356 82 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 SERF1AO75920 110 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 PRSS2P07478 247 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 DDTP30046 118 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 CKS1BP61024 79 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 GAGE2EQ4V326 116 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 SPINK6Q6UWN8 80 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 IFI27L1Q96BM0 104 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 ZNF625Q96I27 306 aaPredicted RBP5.38□□□□□ -1.55
SSBP4-208ENST00000600628 LINC01600Q96MT4 127 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 TOMM7Q9P0U1 55 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 GAGE2DQ9UEU5 116 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 TP73-AS1Q9UF72 201 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 PLA2G2DQ9UNK4 145 aa5.38□□□□□ -1.55
SSBP4-208ENST00000600628 IGLV5-37A0A075B6J1 123 aa5.37□□□□□ -1.55
SSBP4-208ENST00000600628 FAM19A2Q8N3H0 131 aa5.37□□□□□ -1.55
SSBP4-208ENST00000600628 KRTAP10-8P60410 259 aa5.36□□□□□ -1.55
SSBP4-208ENST00000600628 TMEM223A0PJW6 202 aa5.35□□□□□ -1.55
SSBP4-208ENST00000600628 M0QXV9 152 aa5.35□□□□□ -1.55
SSBP4-208ENST00000600628 HSBP1O75506 76 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms