RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 IGHV3-33P01772 117 aa13.6□□□□□ -0.23
PNKP-214ENST00000600573 TSPAN13O95857 204 aa13.59□□□□□ -0.23
PNKP-214ENST00000600573 DNAH10OSP0CZ25 163 aa13.59□□□□□ -0.23
PNKP-214ENST00000600573 PRO1854Q9UHT4 67 aa13.59□□□□□ -0.23
PNKP-214ENST00000600573 ENHOQ6UWT2 76 aa13.58□□□□□ -0.24
PNKP-214ENST00000600573 UPK3BQ9BT76 320 aa13.57□□□□□ -0.24
PNKP-214ENST00000600573 Q8IZM0 81 aa13.57□□□□□ -0.24
PNKP-214ENST00000600573 LYRM7Q5U5X0 104 aa13.56□□□□□ -0.24
PNKP-214ENST00000600573 UBE2WQ96B02 151 aa13.56□□□□□ -0.24
PNKP-214ENST00000600573 LINC00588Q9Y4M8 146 aa13.56□□□□□ -0.24
PNKP-214ENST00000600573 MALP21145 153 aa13.55□□□□□ -0.24
PNKP-214ENST00000600573 NPC2P61916 151 aa13.55□□□□□ -0.24
PNKP-214ENST00000600573 FOXI1Q12951 378 aa13.55□□□□□ -0.24
PNKP-214ENST00000600573 DAND5Q8N907 189 aa13.55□□□□□ -0.24
PNKP-214ENST00000600573 LINC00308Q8TCZ7 52 aa13.55□□□□□ -0.24
PNKP-214ENST00000600573 PPDPFQ9H3Y8 114 aa13.55□□□□□ -0.24
PNKP-214ENST00000600573 IGLV10-54A0A075B6I4 117 aa13.54□□□□□ -0.24
PNKP-214ENST00000600573 NUPR2A6NF83 97 aa13.54□□□□□ -0.24
PNKP-214ENST00000600573 EIF4EBP3O60516 100 aaPredicted RBP13.54□□□□□ -0.24
PNKP-214ENST00000600573 KLK5Q9Y337 293 aaPredicted RBP13.54□□□□□ -0.24
PNKP-214ENST00000600573 GAGE12HA6NDE8 117 aa13.53□□□□□ -0.24
PNKP-214ENST00000600573 C6orf226Q5I0X4 101 aa13.53□□□□□ -0.24
PNKP-214ENST00000600573 CXCL5P42830 114 aa13.53□□□□□ -0.24
PNKP-214ENST00000600573 A0A0U1RRA0 63 aa13.52□□□□□ -0.25
PNKP-214ENST00000600573 IBA57-AS1B1ANH7 110 aa13.52□□□□□ -0.25
PNKP-214ENST00000600573 ERG28Q9UKR5 140 aa13.52□□□□□ -0.25
PNKP-214ENST00000600573 MEGF8Q7Z7M0 2845 aa13.51□□□□□ -0.25
PNKP-214ENST00000600573 CFAP161Q6P656 301 aa13.5□□□□□ -0.25
PNKP-214ENST00000600573 APLNQ9ULZ1 77 aa13.5□□□□□ -0.25
PNKP-214ENST00000600573 LOC107984156A0A0G2JMH3 177 aa13.49□□□□□ -0.25
PNKP-214ENST00000600573 ARL17AQ8IVW1 177 aa13.49□□□□□ -0.25
PNKP-214ENST00000600573 SOSTDC1Q6X4U4 206 aa13.48□□□□□ -0.25
PNKP-214ENST00000600573 C1orf43Q9BWL3 253 aa13.48□□□□□ -0.25
PNKP-214ENST00000600573 LINC00158P58513 81 aa13.47□□□□□ -0.25
PNKP-214ENST00000600573 CKS1BP61024 79 aa13.47□□□□□ -0.25
PNKP-214ENST00000600573 Q1RN00 199 aa13.47□□□□□ -0.25
PNKP-214ENST00000600573 MIR7-3HGQ8N6C7 128 aa13.46□□□□□ -0.25
PNKP-214ENST00000600573 H7C2G1 150 aa13.46□□□□□ -0.26
PNKP-214ENST00000600573 KIAA0087Q14695 138 aa13.46□□□□□ -0.26
PNKP-214ENST00000600573 RMI2Q96E14 147 aa13.46□□□□□ -0.26
PNKP-214ENST00000600573 PSMB2P49721 201 aa13.45□□□□□ -0.26
PNKP-214ENST00000600573 PRKDCP78527 4128 aaKnown RBP13.44□□□□□ -0.26
PNKP-214ENST00000600573 RPL13AP40429 203 aaKnown RBP13.43□□□□□ -0.26
PNKP-214ENST00000600573 SPAG11BQ08648 103 aa13.43□□□□□ -0.26
PNKP-214ENST00000600573 KRTAP26-1Q6PEX3 210 aa13.43□□□□□ -0.26
PNKP-214ENST00000600573 TRBV20-1A0A075B6N2 111 aa13.42□□□□□ -0.26
PNKP-214ENST00000600573 COX17Q14061 63 aa13.42□□□□□ -0.26
PNKP-214ENST00000600573 C2orf82Q6UX34 121 aa13.42□□□□□ -0.26
PNKP-214ENST00000600573 F8WDY8 70 aa13.42□□□□□ -0.26
PNKP-214ENST00000600573 PFN2P35080 140 aa13.42□□□□□ -0.26
PNKP-214ENST00000600573 UBE2DNLQ8IWF7 75 aa13.42□□□□□ -0.26
PNKP-214ENST00000600573 COL7A1Q02388 2944 aa13.41□□□□□ -0.26
PNKP-214ENST00000600573 TRBV30A0A0K0K1B3 111 aa13.41□□□□□ -0.26
PNKP-214ENST00000600573 SCGB1C2P0DMR2 95 aa13.41□□□□□ -0.26
PNKP-214ENST00000600573 MUC7Q8TAX7 377 aa13.41□□□□□ -0.26
PNKP-214ENST00000600573 IGKV2D-24A0A075B6R9 120 aa13.4□□□□□ -0.26
PNKP-214ENST00000600573 H3BMG7 143 aa13.4□□□□□ -0.26
PNKP-214ENST00000600573 DYNC2H1Q8NCM8 4307 aaKnown RBP13.39□□□□□ -0.27
PNKP-214ENST00000600573 SND1-IT1Q9HBX3 110 aa13.39□□□□□ -0.27
PNKP-214ENST00000600573 F8W1H4 67 aa13.37□□□□□ -0.27
PNKP-214ENST00000600573 TRIAP1O43715 76 aa13.37□□□□□ -0.27
PNKP-214ENST00000600573 TCL1BO95988 128 aa13.37□□□□□ -0.27
PNKP-214ENST00000600573 STAB2Q8WWQ8 2551 aa13.37□□□□□ -0.27
PNKP-214ENST00000600573 ZNF561-AS1K7EIQ3 104 aa13.36□□□□□ -0.27
PNKP-214ENST00000600573 NTN5Q8WTR8 489 aaPredicted RBP13.36□□□□□ -0.27
PNKP-214ENST00000600573 GVQW2A0A096LPI5 108 aaPredicted RBP13.35□□□□□ -0.27
PNKP-214ENST00000600573 TRAV13-2A0A0B4J235 113 aa13.35□□□□□ -0.27
PNKP-214ENST00000600573 COX6CP09669 75 aa13.35□□□□□ -0.27
PNKP-214ENST00000600573 C2orf48Q96LS8 159 aa13.35□□□□□ -0.27
PNKP-214ENST00000600573 Q9HAA7 133 aa13.34□□□□□ -0.27
PNKP-214ENST00000600573 PRO0461Q9UI25 63 aa13.34□□□□□ -0.27
PNKP-214ENST00000600573 ATXN8Q156A1 80 aa13.32□□□□□ -0.28
PNKP-214ENST00000600573 C6orf223Q8N319 242 aa13.32□□□□□ -0.28
PNKP-214ENST00000600573 TTC32Q5I0X7 151 aa13.31□□□□□ -0.28
PNKP-214ENST00000600573 UNQ6190/PRO20217Q6UXQ8 127 aa13.31□□□□□ -0.28
PNKP-214ENST00000600573 IGKV2-28A0A075B6P5 120 aa13.3□□□□□ -0.28
PNKP-214ENST00000600573 IGKV2D-28P01615 120 aa13.3□□□□□ -0.28
PNKP-214ENST00000600573 C15orf56Q8N910 161 aa13.3□□□□□ -0.28
PNKP-214ENST00000600573 C10orf25Q5T742 122 aa13.29□□□□□ -0.28
PNKP-214ENST00000600573 WFDC2Q14508 124 aa13.28□□□□□ -0.28
PNKP-214ENST00000600573 MTURNQ8N3F0 131 aa13.28□□□□□ -0.28
PNKP-214ENST00000600573 LINC00526Q96FQ7 95 aa13.28□□□□□ -0.28
PNKP-214ENST00000600573 CAMK2N2Q96S95 79 aa13.28□□□□□ -0.28
PNKP-214ENST00000600573 OCIAD2Q56VL3 154 aa13.28□□□□□ -0.28
PNKP-214ENST00000600573 C9orf116Q5BN46 136 aaPredicted RBP13.28□□□□□ -0.28
PNKP-214ENST00000600573 LINC00337Q8N6G1 96 aa13.28□□□□□ -0.28
PNKP-214ENST00000600573 HIGD2BQ4VC39 106 aa13.26□□□□□ -0.29
PNKP-214ENST00000600573 NDUFC2O95298 119 aa13.25□□□□□ -0.29
PNKP-214ENST00000600573 DNAH7Q8WXX0 4024 aa13.25□□□□□ -0.29
PNKP-214ENST00000600573 LINC01620Q4KN68 170 aa13.24□□□□□ -0.29
PNKP-214ENST00000600573 C6orf48Q9UBA6 75 aa13.24□□□□□ -0.29
PNKP-214ENST00000600573 K7ERU9 68 aa13.24□□□□□ -0.29
PNKP-214ENST00000600573 LST1O00453 97 aa13.23□□□□□ -0.29
PNKP-214ENST00000600573 RPL28P46779 137 aaKnown RBP13.23□□□□□ -0.29
PNKP-214ENST00000600573 SMCPP49901 116 aaPredicted RBP13.23□□□□□ -0.29
PNKP-214ENST00000600573 RNF151Q2KHN1 245 aa13.23□□□□□ -0.29
PNKP-214ENST00000600573 CLEC2BQ92478 149 aa13.23□□□□□ -0.29
PNKP-214ENST00000600573 NBDYA0A0U1RRE5 68 aa13.22□□□□□ -0.29
PNKP-214ENST00000600573 C9JAW5 83 aa13.22□□□□□ -0.29
PNKP-214ENST00000600573 WWC2-AS2Q96NR7 200 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms